RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 Q6ZNX1 250 aa16.39■□□□□ 0.21
CASC4-204ENST00000557945 ZC4H2Q9NQZ6 224 aa16.39■□□□□ 0.21
CASC4-204ENST00000557945 OR2T8A6NH00 312 aa16.38■□□□□ 0.21
CASC4-204ENST00000557945 DEDDO75618 318 aa16.38■□□□□ 0.21
CASC4-204ENST00000557945 ARL3P36405 182 aa16.38■□□□□ 0.21
CASC4-204ENST00000557945 CAV2P51636 162 aa16.38■□□□□ 0.21
CASC4-204ENST00000557945 ETFRF1Q6IPR1 90 aa16.38■□□□□ 0.21
CASC4-204ENST00000557945 METTL15P1P0C7V9 234 aa16.38■□□□□ 0.21
CASC4-204ENST00000557945 ANK2Q01484 3957 aa16.37■□□□□ 0.21
CASC4-204ENST00000557945 WNK1Q9H4A3 2382 aa16.37■□□□□ 0.21
CASC4-204ENST00000557945 BMPR1BO00238 502 aa16.37■□□□□ 0.21
CASC4-204ENST00000557945 ZP3P21754 424 aa16.37■□□□□ 0.21
CASC4-204ENST00000557945 NPBWR1P48145 328 aa16.37■□□□□ 0.21
CASC4-204ENST00000557945 SLURP1P55000 103 aa16.37■□□□□ 0.21
CASC4-204ENST00000557945 CD69Q07108 199 aa16.37■□□□□ 0.21
CASC4-204ENST00000557945 FHL3Q13643 280 aa16.37■□□□□ 0.21
CASC4-204ENST00000557945 RPEL1Q2QD12 228 aa16.37■□□□□ 0.21
CASC4-204ENST00000557945 OR8G2PQ6IF36 304 aa16.37■□□□□ 0.21
CASC4-204ENST00000557945 SLC16A13Q7RTY0 426 aa16.37■□□□□ 0.21
CASC4-204ENST00000557945 TXN2Q99757 166 aa16.37■□□□□ 0.21
CASC4-204ENST00000557945 C11orf1Q9H5F2 150 aa16.37■□□□□ 0.21
CASC4-204ENST00000557945 GAR1Q9NY12 217 aaKnown RBP16.37■□□□□ 0.21
CASC4-204ENST00000557945 OR5AC2Q9NZP5 309 aa16.37■□□□□ 0.21
CASC4-204ENST00000557945 FAM24AA6NFZ4 105 aa16.36■□□□□ 0.21
CASC4-204ENST00000557945 F8W735 103 aaPredicted RBP16.36■□□□□ 0.21
CASC4-204ENST00000557945 GNG7O60262 68 aa16.36■□□□□ 0.21
CASC4-204ENST00000557945 GGCTO75223 188 aaKnown RBP16.36■□□□□ 0.21
CASC4-204ENST00000557945 MPC2O95563 127 aa16.36■□□□□ 0.21
CASC4-204ENST00000557945 GIPP09681 153 aaPredicted RBP16.36■□□□□ 0.21
CASC4-204ENST00000557945 PET100P0DJ07 73 aa16.36■□□□□ 0.21
CASC4-204ENST00000557945 SLC25A4P12235 298 aa16.36■□□□□ 0.21
CASC4-204ENST00000557945 HOXD3P31249 432 aaPredicted RBP16.36■□□□□ 0.21
CASC4-204ENST00000557945 TMEM14EPQ6UXP3 125 aa16.36■□□□□ 0.21
CASC4-204ENST00000557945 ACY3Q96HD9 319 aa16.36■□□□□ 0.21
CASC4-204ENST00000557945 MRPL36Q9P0J6 103 aaKnown RBP16.36■□□□□ 0.21
CASC4-204ENST00000557945 E5RGE8 158 aa16.35■□□□□ 0.21
CASC4-204ENST00000557945 H0YIZ8 118 aa16.35■□□□□ 0.21
CASC4-204ENST00000557945 TGOLN2O43493 480 aa16.35■□□□□ 0.21
CASC4-204ENST00000557945 CCNKO75909 580 aa16.35■□□□□ 0.21
CASC4-204ENST00000557945 GPX4P36969 197 aaPredicted RBP16.35■□□□□ 0.21
CASC4-204ENST00000557945 RND2P52198 227 aa16.35■□□□□ 0.21
CASC4-204ENST00000557945 PRSS54Q6PEW0 395 aa16.35■□□□□ 0.21
CASC4-204ENST00000557945 OR4X1Q8NH49 305 aa16.35■□□□□ 0.21
CASC4-204ENST00000557945 BSCL2Q96G97 398 aaPredicted RBP16.35■□□□□ 0.21
CASC4-204ENST00000557945 SLC35E1Q96K37 410 aa16.35■□□□□ 0.21
CASC4-204ENST00000557945 ATP6V0BQ99437 205 aa16.35■□□□□ 0.21
CASC4-204ENST00000557945 hCG_2014768A0A024R1R8 64 aa16.34■□□□□ 0.21
CASC4-204ENST00000557945 NUPL2O15504 423 aaKnown RBP16.34■□□□□ 0.21
CASC4-204ENST00000557945 OR2C1O95371 312 aa16.34■□□□□ 0.21
CASC4-204ENST00000557945 FCGR2BP31994 310 aaPredicted RBP16.34■□□□□ 0.21
CASC4-204ENST00000557945 LINC00482Q8N8I6 264 aa16.34■□□□□ 0.21
CASC4-204ENST00000557945 OR10P1Q8NGE3 313 aa16.34■□□□□ 0.21
CASC4-204ENST00000557945 ASB13Q8WXK3 278 aa16.34■□□□□ 0.21
CASC4-204ENST00000557945 CACNG8Q8WXS5 425 aa16.34■□□□□ 0.21
CASC4-204ENST00000557945 LYRM2Q9NU23 88 aaPredicted RBP16.34■□□□□ 0.21
CASC4-204ENST00000557945 IGHV3-35A0A0C4DH35 117 aa16.33■□□□□ 0.2
CASC4-204ENST00000557945 CLN5O75503 358 aa16.33■□□□□ 0.2
CASC4-204ENST00000557945 RAP2BP61225 183 aa16.33■□□□□ 0.2
CASC4-204ENST00000557945 SPSB3Q6PJ21 355 aa16.33■□□□□ 0.2
CASC4-204ENST00000557945 THAP6Q8TBB0 222 aa16.33■□□□□ 0.2
CASC4-204ENST00000557945 DCUN1D4Q92564 292 aa16.33■□□□□ 0.2
CASC4-204ENST00000557945 NPIPB3Q92617 1050 aa16.33■□□□□ 0.2
CASC4-204ENST00000557945 CHRDL1Q9BU40 450 aa16.33■□□□□ 0.2
CASC4-204ENST00000557945 RNF126Q9BV68 326 aa16.33■□□□□ 0.2
CASC4-204ENST00000557945 MBD2Q9UBB5 411 aa16.33■□□□□ 0.2
CASC4-204ENST00000557945 IGSF23A1L1A6 192 aa16.32■□□□□ 0.2
CASC4-204ENST00000557945 PMS2P5A8MQ11 134 aa16.32■□□□□ 0.2
CASC4-204ENST00000557945 PRSS46E5RG02 174 aa16.32■□□□□ 0.2
CASC4-204ENST00000557945 CST7O76096 145 aa16.32■□□□□ 0.2
CASC4-204ENST00000557945 P2RY1P47900 373 aa16.32■□□□□ 0.2
CASC4-204ENST00000557945 SYNJ2BPP57105 145 aa16.32■□□□□ 0.2
CASC4-204ENST00000557945 GAMTQ14353 236 aa16.32■□□□□ 0.2
CASC4-204ENST00000557945 PRR31Q5SQ13 230 aa16.32■□□□□ 0.2
CASC4-204ENST00000557945 TMEM252Q8N6L7 170 aa16.32■□□□□ 0.2
CASC4-204ENST00000557945 CHAC2Q8WUX2 184 aa16.32■□□□□ 0.2
CASC4-204ENST00000557945 DLX4Q92988 240 aaPredicted RBP16.32■□□□□ 0.2
CASC4-204ENST00000557945 DNHD1Q96M86 4753 aa16.32■□□□□ 0.2
CASC4-204ENST00000557945 TRAV14DV4A0A0A6YYC5 116 aa16.31■□□□□ 0.2
CASC4-204ENST00000557945 SCGB2A1O75556 95 aa16.31■□□□□ 0.2
CASC4-204ENST00000557945 CTSGP08311 255 aa16.31■□□□□ 0.2
CASC4-204ENST00000557945 CD33P20138 364 aa16.31■□□□□ 0.2
CASC4-204ENST00000557945 FGL1Q08830 312 aa16.31■□□□□ 0.2
CASC4-204ENST00000557945 ACOT7LQ6ZUV0 252 aa16.31■□□□□ 0.2
CASC4-204ENST00000557945 STX12Q86Y82 276 aa16.31■□□□□ 0.2
CASC4-204ENST00000557945 TMEM116Q8NCL8 245 aa16.31■□□□□ 0.2
CASC4-204ENST00000557945 SMCO3A2RU48 225 aa16.3■□□□□ 0.2
CASC4-204ENST00000557945 ADMP35318 185 aa16.3■□□□□ 0.2
CASC4-204ENST00000557945 ARL16Q0P5N6 197 aa16.3■□□□□ 0.2
CASC4-204ENST00000557945 KLF5Q13887 457 aaPredicted RBP16.3■□□□□ 0.2
CASC4-204ENST00000557945 TREML4Q6UXN2 200 aa16.3■□□□□ 0.2
CASC4-204ENST00000557945 HAPLN4Q86UW8 402 aa16.3■□□□□ 0.2
CASC4-204ENST00000557945 TMEM217Q8N7C4 229 aa16.3■□□□□ 0.2
CASC4-204ENST00000557945 OR2T35Q8NGX2 323 aa16.3■□□□□ 0.2
CASC4-204ENST00000557945 SLC25A31Q9H0C2 315 aa16.3■□□□□ 0.2
CASC4-204ENST00000557945 TRAV30A0A087WSZ9 112 aa16.29■□□□□ 0.2
CASC4-204ENST00000557945 OVOL1O14753 267 aa16.29■□□□□ 0.2
CASC4-204ENST00000557945 SCAF4O95104 1147 aaKnown RBP16.29■□□□□ 0.2
CASC4-204ENST00000557945 OR10J1P30954 320 aa16.29■□□□□ 0.2
CASC4-204ENST00000557945 SULT1A1P50225 295 aa16.29■□□□□ 0.2
CASC4-204ENST00000557945 AKR1C1Q04828 323 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms