RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 TSC22D2O75157 780 aa11.77□□□□□ -0.53
NEDD1-213ENST00000557644 BCAP31P51572 246 aa11.77□□□□□ -0.53
NEDD1-213ENST00000557644 RAB11AP62491 216 aa11.77□□□□□ -0.53
NEDD1-213ENST00000557644 TMEM14EPQ6UXP3 125 aa11.77□□□□□ -0.53
NEDD1-213ENST00000557644 NOXA1Q86UR1 476 aa11.77□□□□□ -0.53
NEDD1-213ENST00000557644 OR1N2Q8NGR9 330 aa11.77□□□□□ -0.53
NEDD1-213ENST00000557644 M0QZ24 198 aa11.76□□□□□ -0.53
NEDD1-213ENST00000557644 LY86O95711 162 aa11.76□□□□□ -0.53
NEDD1-213ENST00000557644 GIPP09681 153 aaPredicted RBP11.76□□□□□ -0.53
NEDD1-213ENST00000557644 PVALBP20472 110 aaPredicted RBP11.76□□□□□ -0.53
NEDD1-213ENST00000557644 ATP5IP56385 69 aaPredicted RBP11.76□□□□□ -0.53
NEDD1-213ENST00000557644 OR8G2PQ6IF36 304 aa11.76□□□□□ -0.53
NEDD1-213ENST00000557644 ACSM6Q6P461 480 aa11.76□□□□□ -0.53
NEDD1-213ENST00000557644 TRAV14DV4A0A0A6YYC5 116 aa11.76□□□□□ -0.53
NEDD1-213ENST00000557644 PMS2P5A8MQ11 134 aa11.76□□□□□ -0.53
NEDD1-213ENST00000557644 PRSS46E5RG02 174 aa11.76□□□□□ -0.53
NEDD1-213ENST00000557644 BMPR1BO00238 502 aa11.76□□□□□ -0.53
NEDD1-213ENST00000557644 RLN2P04090 185 aa11.76□□□□□ -0.53
NEDD1-213ENST00000557644 HSPB1P04792 205 aaKnown RBP11.76□□□□□ -0.53
NEDD1-213ENST00000557644 CD69Q07108 199 aa11.76□□□□□ -0.53
NEDD1-213ENST00000557644 Q56UQ5 140 aa11.76□□□□□ -0.53
NEDD1-213ENST00000557644 PRSS54Q6PEW0 395 aa11.76□□□□□ -0.53
NEDD1-213ENST00000557644 OR4F17Q8NGA8 305 aa11.76□□□□□ -0.53
NEDD1-213ENST00000557644 OR4F4Q96R69 305 aa11.76□□□□□ -0.53
NEDD1-213ENST00000557644 RANGRFQ9HD47 186 aaPredicted RBP11.76□□□□□ -0.53
NEDD1-213ENST00000557644 MBD2Q9UBB5 411 aa11.76□□□□□ -0.53
NEDD1-213ENST00000557644 SLURP1P55000 103 aa11.75□□□□□ -0.53
NEDD1-213ENST00000557644 ZNF616Q08AN1 781 aa11.75□□□□□ -0.53
NEDD1-213ENST00000557644 ARL16Q0P5N6 197 aa11.75□□□□□ -0.53
NEDD1-213ENST00000557644 FHL3Q13643 280 aa11.75□□□□□ -0.53
NEDD1-213ENST00000557644 HAPLN4Q86UW8 402 aa11.75□□□□□ -0.53
NEDD1-213ENST00000557644 LYRM2Q9NU23 88 aaPredicted RBP11.75□□□□□ -0.53
NEDD1-213ENST00000557644 IGHV3-35A0A0C4DH35 117 aa11.75□□□□□ -0.53
NEDD1-213ENST00000557644 IGSF23A1L1A6 192 aa11.75□□□□□ -0.53
NEDD1-213ENST00000557644 CST7O76096 145 aa11.75□□□□□ -0.53
NEDD1-213ENST00000557644 MFAP4P55083 255 aa11.75□□□□□ -0.53
NEDD1-213ENST00000557644 SLC16A13Q7RTY0 426 aa11.75□□□□□ -0.53
NEDD1-213ENST00000557644 DPF1Q92782 380 aa11.75□□□□□ -0.53
NEDD1-213ENST00000557644 CHRDL1Q9BU40 450 aa11.75□□□□□ -0.53
NEDD1-213ENST00000557644 CMYA5Q8N3K9 4069 aa11.74□□□□□ -0.53
NEDD1-213ENST00000557644 E5RGE8 158 aa11.74□□□□□ -0.53
NEDD1-213ENST00000557644 LINC01619G3V211 115 aa11.74□□□□□ -0.53
NEDD1-213ENST00000557644 PF4P02776 101 aa11.74□□□□□ -0.53
NEDD1-213ENST00000557644 HOXD3P31249 432 aaPredicted RBP11.74□□□□□ -0.53
NEDD1-213ENST00000557644 ARL3P36405 182 aa11.74□□□□□ -0.53
NEDD1-213ENST00000557644 OR2T35Q8NGX2 323 aa11.74□□□□□ -0.53
NEDD1-213ENST00000557644 RPS10-NUDT3A0A1W2PQS6 291 aa11.74□□□□□ -0.53
NEDD1-213ENST00000557644 SMLR1H3BR10 107 aa11.74□□□□□ -0.53
NEDD1-213ENST00000557644 OR2C1O95371 312 aa11.74□□□□□ -0.53
NEDD1-213ENST00000557644 ADMP35318 185 aa11.74□□□□□ -0.53
NEDD1-213ENST00000557644 RND2P52198 227 aa11.74□□□□□ -0.53
NEDD1-213ENST00000557644 RAP2BP61225 183 aa11.74□□□□□ -0.53
NEDD1-213ENST00000557644 GAMTQ14353 236 aa11.74□□□□□ -0.53
NEDD1-213ENST00000557644 ACOT7LQ6ZUV0 252 aa11.74□□□□□ -0.53
NEDD1-213ENST00000557644 TMEM252Q8N6L7 170 aa11.74□□□□□ -0.53
NEDD1-213ENST00000557644 NPIPB3Q92617 1050 aa11.74□□□□□ -0.53
NEDD1-213ENST00000557644 ACY3Q96HD9 319 aa11.74□□□□□ -0.53
NEDD1-213ENST00000557644 CTSGP08311 255 aa11.73□□□□□ -0.53
NEDD1-213ENST00000557644 PET100P0DJ07 73 aa11.73□□□□□ -0.53
NEDD1-213ENST00000557644 MYCNOSP40205 109 aa11.73□□□□□ -0.53
NEDD1-213ENST00000557644 TMEM217Q8N7C4 229 aa11.73□□□□□ -0.53
NEDD1-213ENST00000557644 OR4X1Q8NH49 305 aa11.73□□□□□ -0.53
NEDD1-213ENST00000557644 G3V3Q6 166 aa11.72□□□□□ -0.53
NEDD1-213ENST00000557644 TGOLN2O43493 480 aa11.72□□□□□ -0.53
NEDD1-213ENST00000557644 GNG7O60262 68 aa11.72□□□□□ -0.53
NEDD1-213ENST00000557644 FCGR2BP31994 310 aaPredicted RBP11.72□□□□□ -0.53
NEDD1-213ENST00000557644 GPX4P36969 197 aaPredicted RBP11.72□□□□□ -0.53
NEDD1-213ENST00000557644 ETFRF1Q6IPR1 90 aa11.72□□□□□ -0.53
NEDD1-213ENST00000557644 TMEM116Q8NCL8 245 aa11.72□□□□□ -0.53
NEDD1-213ENST00000557644 BSCL2Q96G97 398 aaPredicted RBP11.72□□□□□ -0.53
NEDD1-213ENST00000557644 SLC25A4P12235 298 aa11.72□□□□□ -0.53
NEDD1-213ENST00000557644 P2RY1P47900 373 aa11.72□□□□□ -0.53
NEDD1-213ENST00000557644 NPBWR1P48145 328 aa11.72□□□□□ -0.53
NEDD1-213ENST00000557644 RPEL1Q2QD12 228 aa11.72□□□□□ -0.53
NEDD1-213ENST00000557644 OR10P1Q8NGE3 313 aa11.72□□□□□ -0.53
NEDD1-213ENST00000557644 ASB13Q8WXK3 278 aa11.72□□□□□ -0.53
NEDD1-213ENST00000557644 DCUN1D4Q92564 292 aa11.72□□□□□ -0.53
NEDD1-213ENST00000557644 DLX4Q92988 240 aaPredicted RBP11.72□□□□□ -0.53
NEDD1-213ENST00000557644 TXN2Q99757 166 aa11.72□□□□□ -0.53
NEDD1-213ENST00000557644 NOTCH3Q9UM47 2321 aa11.72□□□□□ -0.53
NEDD1-213ENST00000557644 GGCTO75223 188 aaKnown RBP11.71□□□□□ -0.53
NEDD1-213ENST00000557644 CLN5O75503 358 aa11.71□□□□□ -0.53
NEDD1-213ENST00000557644 NHLH2Q02577 135 aa11.71□□□□□ -0.53
NEDD1-213ENST00000557644 LINC00482Q8N8I6 264 aa11.71□□□□□ -0.53
NEDD1-213ENST00000557644 THAP6Q8TBB0 222 aa11.71□□□□□ -0.53
NEDD1-213ENST00000557644 CACNG8Q8WXS5 425 aa11.71□□□□□ -0.53
NEDD1-213ENST00000557644 LYL1P12980 280 aa11.71□□□□□ -0.54
NEDD1-213ENST00000557644 SULT1A1P50225 295 aa11.71□□□□□ -0.54
NEDD1-213ENST00000557644 SYNJ2BPP57105 145 aa11.71□□□□□ -0.54
NEDD1-213ENST00000557644 FAM209BQ5JX69 171 aa11.71□□□□□ -0.54
NEDD1-213ENST00000557644 ZNF414Q96IQ9 312 aa11.71□□□□□ -0.54
NEDD1-213ENST00000557644 SLC35E1Q96K37 410 aa11.71□□□□□ -0.54
NEDD1-213ENST00000557644 NUPL2O15504 423 aaKnown RBP11.7□□□□□ -0.54
NEDD1-213ENST00000557644 ZP3P21754 424 aa11.7□□□□□ -0.54
NEDD1-213ENST00000557644 EWSR1Q01844 656 aaKnown RBP eCLIP11.7□□□□□ -0.54
NEDD1-213ENST00000557644 STX12Q86Y82 276 aa11.7□□□□□ -0.54
NEDD1-213ENST00000557644 ATP6V0BQ99437 205 aa11.7□□□□□ -0.54
NEDD1-213ENST00000557644 IGKV1OR2-108A0A075B7D4 117 aa11.7□□□□□ -0.54
NEDD1-213ENST00000557644 IGHV3OR16-8A0A075B7F1 116 aa11.7□□□□□ -0.54
NEDD1-213ENST00000557644 SMCO3A2RU48 225 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms