RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 GLT6D1Q7Z4J2 308 aa2.68□□□□□ -1.98
PRPF39-210ENST00000556718 NIT1Q86X76 327 aa2.68□□□□□ -1.98
PRPF39-210ENST00000556718 OR51D1Q8NGF3 324 aa2.68□□□□□ -1.98
PRPF39-210ENST00000556718 OR52L1Q8NGH7 329 aa2.68□□□□□ -1.98
PRPF39-210ENST00000556718 CIRBP-AS1Q8TBR5 109 aa2.68□□□□□ -1.98
PRPF39-210ENST00000556718 GPR119Q8TDV5 335 aa2.68□□□□□ -1.98
PRPF39-210ENST00000556718 OR10C1Q96KK4 312 aa2.68□□□□□ -1.98
PRPF39-210ENST00000556718 C2orf50Q96LR7 162 aa2.68□□□□□ -1.98
PRPF39-210ENST00000556718 IP6K3Q96PC2 410 aa2.68□□□□□ -1.98
PRPF39-210ENST00000556718 AP1S3Q96PC3 154 aa2.68□□□□□ -1.98
PRPF39-210ENST00000556718 SIGMAR1Q99720 223 aa2.68□□□□□ -1.98
PRPF39-210ENST00000556718 BANF2Q9H503 90 aa2.68□□□□□ -1.98
PRPF39-210ENST00000556718 NAT8Q9UHE5 227 aa2.68□□□□□ -1.98
PRPF39-210ENST00000556718 C14orf166Q9Y224 244 aaKnown RBP2.68□□□□□ -1.98
PRPF39-210ENST00000556718 TAF1LQ8IZX4 1826 aa2.68□□□□□ -1.98
PRPF39-210ENST00000556718 BAZ2BQ9UIF8 2168 aaKnown RBP2.67□□□□□ -1.98
PRPF39-210ENST00000556718 UBR2Q8IWV8 1755 aa2.67□□□□□ -1.98
PRPF39-210ENST00000556718 CCL15-CCL14A0A0B4J2E2 113 aa2.67□□□□□ -1.98
PRPF39-210ENST00000556718 PIGBOS1A0A0B4J2F0 54 aa2.67□□□□□ -1.98
PRPF39-210ENST00000556718 MAP1LC3B2A6NCE7 125 aa2.67□□□□□ -1.98
PRPF39-210ENST00000556718 ARL5CA6NH57 179 aa2.67□□□□□ -1.98
PRPF39-210ENST00000556718 A8MWL6 223 aa2.67□□□□□ -1.98
PRPF39-210ENST00000556718 LOC730098B7Z3J9 87 aa2.67□□□□□ -1.98
PRPF39-210ENST00000556718 M0R129 80 aa2.67□□□□□ -1.98
PRPF39-210ENST00000556718 CORTO00230 105 aa2.67□□□□□ -1.98
PRPF39-210ENST00000556718 UPK2O00526 184 aa2.67□□□□□ -1.98
PRPF39-210ENST00000556718 CCL25O15444 150 aa2.67□□□□□ -1.98
PRPF39-210ENST00000556718 SOX14O95416 240 aa2.67□□□□□ -1.98
PRPF39-210ENST00000556718 IL3RAP26951 378 aa2.67□□□□□ -1.98
PRPF39-210ENST00000556718 S100GP29377 79 aa2.67□□□□□ -1.98
PRPF39-210ENST00000556718 RPL12P30050 165 aaKnown RBP2.67□□□□□ -1.98
PRPF39-210ENST00000556718 CMPK1P30085 196 aa2.67□□□□□ -1.98
PRPF39-210ENST00000556718 PYCR1P32322 319 aa2.67□□□□□ -1.98
PRPF39-210ENST00000556718 LPAR6P43657 344 aa2.67□□□□□ -1.98
PRPF39-210ENST00000556718 EMP2P54851 167 aa2.67□□□□□ -1.98
PRPF39-210ENST00000556718 PIGPP57054 158 aa2.67□□□□□ -1.98
PRPF39-210ENST00000556718 RAB38P57729 211 aa2.67□□□□□ -1.98
PRPF39-210ENST00000556718 DHRS2Q13268 280 aa2.67□□□□□ -1.98
PRPF39-210ENST00000556718 CCL15Q16663 113 aa2.67□□□□□ -1.98
PRPF39-210ENST00000556718 ZNF791Q3KP31 576 aaPredicted RBP2.67□□□□□ -1.98
PRPF39-210ENST00000556718 ARHGAP11BQ3KRB8 267 aa2.67□□□□□ -1.98
PRPF39-210ENST00000556718 SGPP2Q8IWX5 399 aa2.67□□□□□ -1.98
PRPF39-210ENST00000556718 ZNF101Q8IZC7 436 aa2.67□□□□□ -1.98
PRPF39-210ENST00000556718 ORMDL3Q8N138 153 aa2.67□□□□□ -1.98
PRPF39-210ENST00000556718 ZCCHC24Q8N2G6 241 aaKnown RBP2.67□□□□□ -1.98
PRPF39-210ENST00000556718 TMEM156Q8N614 296 aa2.67□□□□□ -1.98
PRPF39-210ENST00000556718 SLC25A29Q8N8R3 303 aa2.67□□□□□ -1.98
PRPF39-210ENST00000556718 OR2Z1Q8NG97 314 aa2.67□□□□□ -1.98
PRPF39-210ENST00000556718 OR5A2Q8NGI9 324 aa2.67□□□□□ -1.98
PRPF39-210ENST00000556718 OR51A2Q8NGJ7 313 aa2.67□□□□□ -1.98
PRPF39-210ENST00000556718 OR4C16Q8NGL9 310 aa2.67□□□□□ -1.98
PRPF39-210ENST00000556718 OR2Y1Q8NGV0 311 aa2.67□□□□□ -1.98
PRPF39-210ENST00000556718 OR11L1Q8NGX0 322 aa2.67□□□□□ -1.98
PRPF39-210ENST00000556718 OR2T27Q8NH04 317 aa2.67□□□□□ -1.98
PRPF39-210ENST00000556718 Q8WTZ3 238 aa2.67□□□□□ -1.98
PRPF39-210ENST00000556718 SKA2Q8WVK7 121 aaPredicted RBP2.67□□□□□ -1.98
PRPF39-210ENST00000556718 TSLPQ969D9 159 aa2.67□□□□□ -1.98
PRPF39-210ENST00000556718 SLAMF6Q96DU3 332 aa2.67□□□□□ -1.98
PRPF39-210ENST00000556718 GNPNAT1Q96EK6 184 aaPredicted RBP2.67□□□□□ -1.98
PRPF39-210ENST00000556718 SFRP2Q96HF1 295 aa2.67□□□□□ -1.98
PRPF39-210ENST00000556718 TMEM56Q96MV1 263 aa2.67□□□□□ -1.98
PRPF39-210ENST00000556718 C18orf15Q96N68 181 aa2.67□□□□□ -1.98
PRPF39-210ENST00000556718 YPEL4Q96NS1 127 aa2.67□□□□□ -1.98
PRPF39-210ENST00000556718 PRAP1Q96NZ9 151 aa2.67□□□□□ -1.98
PRPF39-210ENST00000556718 OR7D2Q96RA2 312 aa2.67□□□□□ -1.98
PRPF39-210ENST00000556718 RNF5Q99942 180 aa2.67□□□□□ -1.98
PRPF39-210ENST00000556718 FAAP24Q9BTP7 215 aa2.67□□□□□ -1.98
PRPF39-210ENST00000556718 MAP1LC3BQ9GZQ8 125 aa2.67□□□□□ -1.98
PRPF39-210ENST00000556718 CST9LQ9H4G1 147 aa2.67□□□□□ -1.98
PRPF39-210ENST00000556718 ZNF586Q9NXT0 402 aa2.67□□□□□ -1.98
PRPF39-210ENST00000556718 CKLFQ9UBR5 152 aa2.67□□□□□ -1.98
PRPF39-210ENST00000556718 RAB22AQ9UL26 194 aa2.67□□□□□ -1.98
PRPF39-210ENST00000556718 SLC22A13Q9Y226 551 aa2.67□□□□□ -1.98
PRPF39-210ENST00000556718 LAMTOR2Q9Y2Q5 125 aa2.67□□□□□ -1.98
PRPF39-210ENST00000556718 MRPS16Q9Y3D3 137 aaKnown RBP2.67□□□□□ -1.98
PRPF39-210ENST00000556718 ZNF337Q9Y3M9 751 aa2.67□□□□□ -1.98
PRPF39-210ENST00000556718 TMEM56-RWDD3S4R434 201 aa2.67□□□□□ -1.98
PRPF39-210ENST00000556718 SIGLEC1Q9BZZ2 1709 aa2.67□□□□□ -1.98
PRPF39-210ENST00000556718 KIAA1551Q9HCM1 1747 aa2.66□□□□□ -1.98
PRPF39-210ENST00000556718 IGKV2-28A0A075B6P5 120 aa2.66□□□□□ -1.98
PRPF39-210ENST00000556718 IGHV1-3A0A0C4DH29 117 aa2.66□□□□□ -1.98
PRPF39-210ENST00000556718 OR51F1A6NGY5 319 aa2.66□□□□□ -1.98
PRPF39-210ENST00000556718 OR11H12B2RN74 326 aa2.66□□□□□ -1.98
PRPF39-210ENST00000556718 H7BYZ3 331 aa2.66□□□□□ -1.98
PRPF39-210ENST00000556718 SLC17A3O00476 420 aa2.66□□□□□ -1.98
PRPF39-210ENST00000556718 CRXO43186 299 aaPredicted RBP2.66□□□□□ -1.98
PRPF39-210ENST00000556718 ZNF324O75467 553 aaPredicted RBP2.66□□□□□ -1.98
PRPF39-210ENST00000556718 IGKV2D-28P01615 120 aa2.66□□□□□ -1.98
PRPF39-210ENST00000556718 CD3DP04234 171 aa2.66□□□□□ -1.98
PRPF39-210ENST00000556718 SERPINA7P05543 415 aa2.66□□□□□ -1.98
PRPF39-210ENST00000556718 OR4A8P0C604 315 aa2.66□□□□□ -1.98
PRPF39-210ENST00000556718 SMIM17P0DL12 118 aa2.66□□□□□ -1.98
PRPF39-210ENST00000556718 OR12D1P0DN82 309 aa2.66□□□□□ -1.98
PRPF39-210ENST00000556718 ESDP10768 282 aa2.66□□□□□ -1.98
PRPF39-210ENST00000556718 CTSEP14091 401 aa2.66□□□□□ -1.98
PRPF39-210ENST00000556718 CD99P14209 185 aa2.66□□□□□ -1.98
PRPF39-210ENST00000556718 SRP14P37108 136 aaKnown RBP2.66□□□□□ -1.98
PRPF39-210ENST00000556718 GUCA1AP43080 201 aaPredicted RBP2.66□□□□□ -1.98
PRPF39-210ENST00000556718 TAS2R41P59536 307 aa2.66□□□□□ -1.98
PRPF39-210ENST00000556718 S100A10P60903 97 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms