RNA–Protein interactions for RNA: ENST00000556689.5

SHMT2-223, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-223ENST00000556689 CA1P00915 261 aaPredicted RBP9.24□□□□□ -0.93
SHMT2-223ENST00000556689 CTSGP08311 255 aa9.24□□□□□ -0.93
SHMT2-223ENST00000556689 RELQ04864 619 aaPredicted RBP9.24□□□□□ -0.93
SHMT2-223ENST00000556689 LPCAT3Q6P1A2 487 aa9.24□□□□□ -0.93
SHMT2-223ENST00000556689 GBGT1Q8N5D6 347 aa9.24□□□□□ -0.93
SHMT2-223ENST00000556689 SDHCQ99643 169 aaPredicted RBP9.24□□□□□ -0.93
SHMT2-223ENST00000556689 SLC5A7Q9GZV3 580 aa9.24□□□□□ -0.93
SHMT2-223ENST00000556689 HRH4Q9H3N8 390 aa9.24□□□□□ -0.93
SHMT2-223ENST00000556689 NDUFA4L2Q9NRX3 87 aa9.24□□□□□ -0.93
SHMT2-223ENST00000556689 C14orf166Q9Y224 244 aaKnown RBP9.24□□□□□ -0.93
SHMT2-223ENST00000556689 IGHV3-49A0A0A0MS15 119 aa9.23□□□□□ -0.93
SHMT2-223ENST00000556689 TRAV14DV4A0A0A6YYC5 116 aa9.23□□□□□ -0.93
SHMT2-223ENST00000556689 K7EIM0 57 aa9.23□□□□□ -0.93
SHMT2-223ENST00000556689 NUPL2O15504 423 aaKnown RBP9.23□□□□□ -0.93
SHMT2-223ENST00000556689 PPYP01298 95 aa9.23□□□□□ -0.93
SHMT2-223ENST00000556689 PGAM2P15259 253 aa9.23□□□□□ -0.93
SHMT2-223ENST00000556689 RFX2P48378 723 aa9.23□□□□□ -0.93
SHMT2-223ENST00000556689 FAM90A2PQ658T7 463 aa9.23□□□□□ -0.93
SHMT2-223ENST00000556689 LSM10Q969L4 123 aaKnown RBP9.23□□□□□ -0.93
SHMT2-223ENST00000556689 OR10C1Q96KK4 312 aa9.23□□□□□ -0.93
SHMT2-223ENST00000556689 SLC25A21Q9BQT8 299 aaPredicted RBP9.23□□□□□ -0.93
SHMT2-223ENST00000556689 ZNF2Q9BSG1 426 aaPredicted RBP9.23□□□□□ -0.93
SHMT2-223ENST00000556689 HINT2Q9BX68 163 aa9.23□□□□□ -0.93
SHMT2-223ENST00000556689 FAT2Q9NYQ8 4349 aa9.23□□□□□ -0.93
SHMT2-223ENST00000556689 DNAH2Q9P225 4427 aa9.23□□□□□ -0.93
SHMT2-223ENST00000556689 A0A1B0GVY2 172 aa9.22□□□□□ -0.93
SHMT2-223ENST00000556689 C15orf61A6NNL5 157 aa9.22□□□□□ -0.93
SHMT2-223ENST00000556689 CD5P06127 495 aa9.22□□□□□ -0.93
SHMT2-223ENST00000556689 FXYD4P59646 89 aa9.22□□□□□ -0.93
SHMT2-223ENST00000556689 ERVK-16P61578 105 aa9.22□□□□□ -0.93
SHMT2-223ENST00000556689 SURF2Q15527 256 aaPredicted RBP9.22□□□□□ -0.93
SHMT2-223ENST00000556689 TRIM16LQ309B1 348 aa9.22□□□□□ -0.93
SHMT2-223ENST00000556689 FAAP20Q6NZ36 180 aa9.22□□□□□ -0.93
SHMT2-223ENST00000556689 CMTM1Q8IZ96 169 aa9.22□□□□□ -0.93
SHMT2-223ENST00000556689 CENPSQ8N2Z9 138 aa9.22□□□□□ -0.93
SHMT2-223ENST00000556689 CCDC71LQ8N9Z2 235 aa9.22□□□□□ -0.93
SHMT2-223ENST00000556689 OR51S1Q8NGJ8 323 aa9.22□□□□□ -0.93
SHMT2-223ENST00000556689 OR51H1Q8NH63 302 aa9.22□□□□□ -0.93
SHMT2-223ENST00000556689 ZFAND1Q8TCF1 268 aa9.22□□□□□ -0.93
SHMT2-223ENST00000556689 COMMD9Q9P000 198 aa9.22□□□□□ -0.93
SHMT2-223ENST00000556689 OR51B2Q9Y5P1 312 aa9.22□□□□□ -0.93
SHMT2-223ENST00000556689 SNAPC5O75971 98 aa9.21□□□□□ -0.94
SHMT2-223ENST00000556689 DFFBO76075 338 aa9.21□□□□□ -0.94
SHMT2-223ENST00000556689 MFAP4P55083 255 aa9.21□□□□□ -0.94
SHMT2-223ENST00000556689 AADACL3Q5VUY0 350 aa9.21□□□□□ -0.94
SHMT2-223ENST00000556689 ZNF818PQ6ZRF7 136 aa9.21□□□□□ -0.94
SHMT2-223ENST00000556689 TCF24Q7RTU0 167 aa9.21□□□□□ -0.94
SHMT2-223ENST00000556689 Q8NAQ8 132 aa9.21□□□□□ -0.94
SHMT2-223ENST00000556689 TERB2Q8NHR7 220 aa9.21□□□□□ -0.94
SHMT2-223ENST00000556689 GIMAP1Q8WWP7 306 aa9.21□□□□□ -0.94
SHMT2-223ENST00000556689 MOB3AQ96BX8 217 aa9.21□□□□□ -0.94
SHMT2-223ENST00000556689 PKHD1P08F94 4074 aa9.21□□□□□ -0.94
SHMT2-223ENST00000556689 IGHV4-4A0A075B6R2 117 aa9.2□□□□□ -0.94
SHMT2-223ENST00000556689 IGHV3OR16-13A0A075B7E8 117 aa9.2□□□□□ -0.94
SHMT2-223ENST00000556689 IGHV3-74A0A0B4J1X5 117 aa9.2□□□□□ -0.94
SHMT2-223ENST00000556689 TRAV10A0A0B4J240 114 aa9.2□□□□□ -0.94
SHMT2-223ENST00000556689 PIGBOS1A0A0B4J2F0 54 aa9.2□□□□□ -0.94
SHMT2-223ENST00000556689 DNASE2O00115 360 aaPredicted RBP9.2□□□□□ -0.94
SHMT2-223ENST00000556689 RLN1P04808 185 aa9.2□□□□□ -0.94
SHMT2-223ENST00000556689 RBMY1A1P0DJD3 496 aaKnown RBP9.2□□□□□ -0.94
SHMT2-223ENST00000556689 RBMY1CP0DJD4 496 aa9.2□□□□□ -0.94
SHMT2-223ENST00000556689 HLA-DMBP28068 263 aa9.2□□□□□ -0.94
SHMT2-223ENST00000556689 DEFB131AP59861 70 aa9.2□□□□□ -0.94
SHMT2-223ENST00000556689 RBMY1FQ15415 496 aaKnown RBP9.2□□□□□ -0.94
SHMT2-223ENST00000556689 LEMD1Q68G75 181 aa9.2□□□□□ -0.94
SHMT2-223ENST00000556689 STHQ8IWL8 128 aa9.2□□□□□ -0.94
SHMT2-223ENST00000556689 OR4D10Q8NGI6 311 aa9.2□□□□□ -0.94
SHMT2-223ENST00000556689 ZNF486Q96H40 463 aaPredicted RBP9.2□□□□□ -0.94
SHMT2-223ENST00000556689 ZNF414Q96IQ9 312 aa9.2□□□□□ -0.94
SHMT2-223ENST00000556689 TMEM56Q96MV1 263 aa9.2□□□□□ -0.94
SHMT2-223ENST00000556689 TXN2Q99757 166 aa9.2□□□□□ -0.94
SHMT2-223ENST00000556689 FKBP11Q9NYL4 201 aa9.2□□□□□ -0.94
SHMT2-223ENST00000556689 TBC1D24Q9ULP9 559 aa9.2□□□□□ -0.94
SHMT2-223ENST00000556689 NSG2Q9Y328 171 aa9.2□□□□□ -0.94
SHMT2-223ENST00000556689 DNAH17Q9UFH2 4485 aa9.19□□□□□ -0.94
SHMT2-223ENST00000556689 IGHV4-28A0A0C4DH34 117 aa9.19□□□□□ -0.94
SHMT2-223ENST00000556689 PRSS29PA6NIE9 313 aa9.19□□□□□ -0.94
SHMT2-223ENST00000556689 MARCH11A6NNE9 402 aa9.19□□□□□ -0.94
SHMT2-223ENST00000556689 NDUFB6O95139 128 aa9.19□□□□□ -0.94
SHMT2-223ENST00000556689 KRASP01116 189 aa9.19□□□□□ -0.94
SHMT2-223ENST00000556689 ANXA3P12429 323 aa9.19□□□□□ -0.94
SHMT2-223ENST00000556689 MIFP14174 115 aa9.19□□□□□ -0.94
SHMT2-223ENST00000556689 GNRHRP30968 328 aa9.19□□□□□ -0.94
SHMT2-223ENST00000556689 RPL11P62913 178 aaKnown RBP9.19□□□□□ -0.94
SHMT2-223ENST00000556689 TMEM41BQ5BJD5 291 aa9.19□□□□□ -0.94
SHMT2-223ENST00000556689 PVRIGQ6DKI7 326 aa9.19□□□□□ -0.94
SHMT2-223ENST00000556689 DHRS11Q6UWP2 260 aa9.19□□□□□ -0.94
SHMT2-223ENST00000556689 Q6ZTC4 211 aa9.19□□□□□ -0.94
SHMT2-223ENST00000556689 TMED4Q7Z7H5 227 aa9.19□□□□□ -0.94
SHMT2-223ENST00000556689 CADM3Q8N126 398 aa9.19□□□□□ -0.94
SHMT2-223ENST00000556689 DUSP18Q8NEJ0 188 aa9.19□□□□□ -0.94
SHMT2-223ENST00000556689 OR1P1Q8NH06 330 aa9.19□□□□□ -0.94
SHMT2-223ENST00000556689 MISP3Q96FF7 219 aa9.19□□□□□ -0.94
SHMT2-223ENST00000556689 GINS3Q9BRX5 216 aa9.19□□□□□ -0.94
SHMT2-223ENST00000556689 C20orf85Q9H1P6 137 aa9.19□□□□□ -0.94
SHMT2-223ENST00000556689 MS4A6AQ9H2W1 248 aa9.19□□□□□ -0.94
SHMT2-223ENST00000556689 NUDT15Q9NV35 164 aa9.19□□□□□ -0.94
SHMT2-223ENST00000556689 DYNC1H1Q14204 4646 aaKnown RBP9.19□□□□□ -0.94
SHMT2-223ENST00000556689 I3L2K1 104 aa9.18□□□□□ -0.94
SHMT2-223ENST00000556689 GPR31O00270 319 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms