RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 TERB2Q8NHR7 220 aa8.64□□□□□ -1.03
ACTN1-221ENST00000556571 ZFAND1Q8TCF1 268 aa8.64□□□□□ -1.03
ACTN1-221ENST00000556571 ZNF486Q96H40 463 aaPredicted RBP8.64□□□□□ -1.03
ACTN1-221ENST00000556571 TXN2Q99757 166 aa8.64□□□□□ -1.03
ACTN1-221ENST00000556571 OR51B2Q9Y5P1 312 aa8.64□□□□□ -1.03
ACTN1-221ENST00000556571 IGHV3OR16-13A0A075B7E8 117 aa8.63□□□□□ -1.03
ACTN1-221ENST00000556571 IGHV3-74A0A0B4J1X5 117 aa8.63□□□□□ -1.03
ACTN1-221ENST00000556571 IGHV4-28A0A0C4DH34 117 aa8.63□□□□□ -1.03
ACTN1-221ENST00000556571 PRSS29PA6NIE9 313 aa8.63□□□□□ -1.03
ACTN1-221ENST00000556571 DNASE2O00115 360 aaPredicted RBP8.63□□□□□ -1.03
ACTN1-221ENST00000556571 SNAPC5O75971 98 aa8.63□□□□□ -1.03
ACTN1-221ENST00000556571 KRASP01116 189 aa8.63□□□□□ -1.03
ACTN1-221ENST00000556571 CD74P04233 296 aa8.63□□□□□ -1.03
ACTN1-221ENST00000556571 AKAIN1P0CW23 69 aa8.63□□□□□ -1.03
ACTN1-221ENST00000556571 MIFP14174 115 aa8.63□□□□□ -1.03
ACTN1-221ENST00000556571 LPAR6P43657 344 aa8.63□□□□□ -1.03
ACTN1-221ENST00000556571 PPP5CP53041 499 aa8.63□□□□□ -1.03
ACTN1-221ENST00000556571 MFAP4P55083 255 aa8.63□□□□□ -1.03
ACTN1-221ENST00000556571 DEFB131AP59861 70 aa8.63□□□□□ -1.03
ACTN1-221ENST00000556571 PYDC2Q56P42 97 aa8.63□□□□□ -1.03
ACTN1-221ENST00000556571 TMEM41BQ5BJD5 291 aa8.63□□□□□ -1.03
ACTN1-221ENST00000556571 PVRIGQ6DKI7 326 aa8.63□□□□□ -1.03
ACTN1-221ENST00000556571 TCF24Q7RTU0 167 aa8.63□□□□□ -1.03
ACTN1-221ENST00000556571 TBC1D26Q86UD7 250 aa8.63□□□□□ -1.03
ACTN1-221ENST00000556571 OR1P1Q8NH06 330 aa8.63□□□□□ -1.03
ACTN1-221ENST00000556571 ZNF414Q96IQ9 312 aa8.63□□□□□ -1.03
ACTN1-221ENST00000556571 TMEM56Q96MV1 263 aa8.63□□□□□ -1.03
ACTN1-221ENST00000556571 RNF126Q9BV68 326 aa8.63□□□□□ -1.03
ACTN1-221ENST00000556571 NXF2Q9GZY0 626 aaKnown RBP8.63□□□□□ -1.03
ACTN1-221ENST00000556571 RBM38Q9H0Z9 239 aaKnown RBP8.63□□□□□ -1.03
ACTN1-221ENST00000556571 FKBP11Q9NYL4 201 aa8.63□□□□□ -1.03
ACTN1-221ENST00000556571 NDUFA13Q9P0J0 144 aa8.63□□□□□ -1.03
ACTN1-221ENST00000556571 COPZ2Q9P299 210 aa8.63□□□□□ -1.03
ACTN1-221ENST00000556571 TRAV2A0A0B4J234 112 aa8.62□□□□□ -1.03
ACTN1-221ENST00000556571 GSTZ1O43708 216 aaPredicted RBP8.62□□□□□ -1.03
ACTN1-221ENST00000556571 RBMY1A1P0DJD3 496 aaKnown RBP8.62□□□□□ -1.03
ACTN1-221ENST00000556571 RBMY1CP0DJD4 496 aa8.62□□□□□ -1.03
ACTN1-221ENST00000556571 PIGPP57054 158 aa8.62□□□□□ -1.03
ACTN1-221ENST00000556571 AP3S2P59780 193 aa8.62□□□□□ -1.03
ACTN1-221ENST00000556571 RBMY1FQ15415 496 aaKnown RBP8.62□□□□□ -1.03
ACTN1-221ENST00000556571 SPANXN2Q5MJ10 180 aa8.62□□□□□ -1.03
ACTN1-221ENST00000556571 LEMD1Q68G75 181 aa8.62□□□□□ -1.03
ACTN1-221ENST00000556571 Q6ZTC4 211 aa8.62□□□□□ -1.03
ACTN1-221ENST00000556571 STHQ8IWL8 128 aa8.62□□□□□ -1.03
ACTN1-221ENST00000556571 CCDC71LQ8N9Z2 235 aa8.62□□□□□ -1.03
ACTN1-221ENST00000556571 DUSP18Q8NEJ0 188 aa8.62□□□□□ -1.03
ACTN1-221ENST00000556571 OR4D10Q8NGI6 311 aa8.62□□□□□ -1.03
ACTN1-221ENST00000556571 PRRT1Q99946 306 aa8.62□□□□□ -1.03
ACTN1-221ENST00000556571 GINS3Q9BRX5 216 aa8.62□□□□□ -1.03
ACTN1-221ENST00000556571 MS4A6AQ9H2W1 248 aa8.62□□□□□ -1.03
ACTN1-221ENST00000556571 FAM212BQ9NTI7 297 aaPredicted RBP8.62□□□□□ -1.03
ACTN1-221ENST00000556571 PRNDQ9UKY0 176 aa8.62□□□□□ -1.03
ACTN1-221ENST00000556571 C14orf166Q9Y224 244 aaKnown RBP8.62□□□□□ -1.03
ACTN1-221ENST00000556571 NSG2Q9Y328 171 aa8.62□□□□□ -1.03
ACTN1-221ENST00000556571 DYNC1H1Q14204 4646 aaKnown RBP8.61□□□□□ -1.03
ACTN1-221ENST00000556571 I3L2K1 104 aa8.61□□□□□ -1.03
ACTN1-221ENST00000556571 ST8SIA3O43173 380 aa8.61□□□□□ -1.03
ACTN1-221ENST00000556571 ATG12O94817 140 aa8.61□□□□□ -1.03
ACTN1-221ENST00000556571 P0DMU3 169 aa8.61□□□□□ -1.03
ACTN1-221ENST00000556571 FAM231AP0DMU4 169 aa8.61□□□□□ -1.03
ACTN1-221ENST00000556571 FAM231CP0DMU5 169 aa8.61□□□□□ -1.03
ACTN1-221ENST00000556571 PI3P19957 117 aa8.61□□□□□ -1.03
ACTN1-221ENST00000556571 FAUP35544 74 aaKnown RBP8.61□□□□□ -1.03
ACTN1-221ENST00000556571 G6PCP35575 357 aa8.61□□□□□ -1.03
ACTN1-221ENST00000556571 RND3P61587 244 aa8.61□□□□□ -1.03
ACTN1-221ENST00000556571 FAAP20Q6NZ36 180 aa8.61□□□□□ -1.03
ACTN1-221ENST00000556571 MORN3Q6PF18 240 aaPredicted RBP8.61□□□□□ -1.03
ACTN1-221ENST00000556571 H2BFWTQ7Z2G1 175 aa8.61□□□□□ -1.03
ACTN1-221ENST00000556571 LHFPL1Q86WI0 220 aa8.61□□□□□ -1.03
ACTN1-221ENST00000556571 POM121L12Q8N7R1 296 aa8.61□□□□□ -1.03
ACTN1-221ENST00000556571 OR13C8Q8NGS7 320 aa8.61□□□□□ -1.03
ACTN1-221ENST00000556571 ST8SIA2Q92186 375 aa8.61□□□□□ -1.03
ACTN1-221ENST00000556571 MISP3Q96FF7 219 aa8.61□□□□□ -1.03
ACTN1-221ENST00000556571 TSC22D3Q99576 134 aa8.61□□□□□ -1.03
ACTN1-221ENST00000556571 VSIRQ9H7M9 311 aa8.61□□□□□ -1.03
ACTN1-221ENST00000556571 MCUBQ9NWR8 336 aa8.61□□□□□ -1.03
ACTN1-221ENST00000556571 SCP2D1Q9UJQ7 156 aa8.61□□□□□ -1.03
ACTN1-221ENST00000556571 TEX13DA0A0J9YY54 714 aaPredicted RBP8.6□□□□□ -1.03
ACTN1-221ENST00000556571 ANKRD20A5PA0PJZ0 165 aa8.6□□□□□ -1.03
ACTN1-221ENST00000556571 ZNF705EA8MWA4 302 aaPredicted RBP8.6□□□□□ -1.03
ACTN1-221ENST00000556571 RTL8CO15255 209 aa8.6□□□□□ -1.03
ACTN1-221ENST00000556571 GNG7O60262 68 aa8.6□□□□□ -1.03
ACTN1-221ENST00000556571 GIG44P09565 113 aaPredicted RBP8.6□□□□□ -1.03
ACTN1-221ENST00000556571 SPP1P10451 314 aa8.6□□□□□ -1.03
ACTN1-221ENST00000556571 INPP1P49441 399 aa8.6□□□□□ -1.03
ACTN1-221ENST00000556571 RPL11P62913 178 aaKnown RBP8.6□□□□□ -1.03
ACTN1-221ENST00000556571 TRIM16LQ309B1 348 aa8.6□□□□□ -1.03
ACTN1-221ENST00000556571 TOMM20LQ6UXN7 152 aa8.6□□□□□ -1.03
ACTN1-221ENST00000556571 LILRB2Q8N423 598 aa8.6□□□□□ -1.03
ACTN1-221ENST00000556571 OR51S1Q8NGJ8 323 aa8.6□□□□□ -1.03
ACTN1-221ENST00000556571 OR4C16Q8NGL9 310 aa8.6□□□□□ -1.03
ACTN1-221ENST00000556571 RNASE11Q8TAA1 199 aaKnown RBP8.6□□□□□ -1.03
ACTN1-221ENST00000556571 MARCH1Q8TCQ1 289 aa8.6□□□□□ -1.03
ACTN1-221ENST00000556571 SCGB3A2Q96PL1 93 aa8.6□□□□□ -1.03
ACTN1-221ENST00000556571 TMEM14BQ9NUH8 114 aa8.6□□□□□ -1.03
ACTN1-221ENST00000556571 ELOA3CA0A087WX78 387 aaPredicted RBP8.59□□□□□ -1.03
ACTN1-221ENST00000556571 C3orf85A0A1B0GTC6 90 aa8.59□□□□□ -1.03
ACTN1-221ENST00000556571 B3GALNT1O75752 331 aa8.59□□□□□ -1.03
ACTN1-221ENST00000556571 MT-CO2P00403 227 aa8.59□□□□□ -1.03
ACTN1-221ENST00000556571 APOHP02749 345 aaPredicted RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms