RNA–Protein interactions for RNA: ENST00000556501.1

GPHN-213, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-213ENST00000556501 FNDC4Q9H6D8 234 aaPredicted RBP4.35□□□□□ -1.71
GPHN-213ENST00000556501 AURKAIP1Q9NWT8 199 aaPredicted RBP4.35□□□□□ -1.71
GPHN-213ENST00000556501 FREM2Q5SZK8 3169 aa4.35□□□□□ -1.71
GPHN-213ENST00000556501 MAP1BP46821 2468 aaKnown RBP4.35□□□□□ -1.71
GPHN-213ENST00000556501 TLN1Q9Y490 2541 aaKnown RBP4.35□□□□□ -1.71
GPHN-213ENST00000556501 PKDREJQ9NTG1 2253 aa4.34□□□□□ -1.71
GPHN-213ENST00000556501 PTPRQQ9UMZ3 2332 aa4.34□□□□□ -1.71
GPHN-213ENST00000556501 IGKV1D-37A0A075B6S9 117 aa4.34□□□□□ -1.71
GPHN-213ENST00000556501 IGHV2-26A0A0B4J1V2 119 aa4.34□□□□□ -1.71
GPHN-213ENST00000556501 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.34□□□□□ -1.71
GPHN-213ENST00000556501 A0A1W2PPI3 338 aa4.34□□□□□ -1.71
GPHN-213ENST00000556501 TCRBV4S1A1TA0A5B7 111 aa4.34□□□□□ -1.71
GPHN-213ENST00000556501 IGLC7A0M8Q6 106 aa4.34□□□□□ -1.71
GPHN-213ENST00000556501 E7EUB6 86 aa4.34□□□□□ -1.71
GPHN-213ENST00000556501 SLC25A17O43808 307 aa4.34□□□□□ -1.71
GPHN-213ENST00000556501 COX7A2P2O60397 106 aa4.34□□□□□ -1.71
GPHN-213ENST00000556501 IGLV1-47P01700 117 aa4.34□□□□□ -1.71
GPHN-213ENST00000556501 CRYGBP07316 175 aa4.34□□□□□ -1.71
GPHN-213ENST00000556501 PAX1P15863 534 aa4.34□□□□□ -1.71
GPHN-213ENST00000556501 HNF1AP20823 631 aa4.34□□□□□ -1.71
GPHN-213ENST00000556501 GATA2P23769 480 aaPredicted RBP4.34□□□□□ -1.71
GPHN-213ENST00000556501 COL8A2P25067 703 aa4.34□□□□□ -1.71
GPHN-213ENST00000556501 CA7P43166 264 aa4.34□□□□□ -1.71
GPHN-213ENST00000556501 RPL27AP46776 148 aaKnown RBP4.34□□□□□ -1.71
GPHN-213ENST00000556501 GNG4P50150 75 aa4.34□□□□□ -1.71
GPHN-213ENST00000556501 PPOXP50336 477 aa4.34□□□□□ -1.71
GPHN-213ENST00000556501 LGALS4P56470 323 aa4.34□□□□□ -1.71
GPHN-213ENST00000556501 UBE2L3P68036 154 aaKnown RBP4.34□□□□□ -1.71
GPHN-213ENST00000556501 SSBP2P81877 361 aaPredicted RBP4.34□□□□□ -1.71
GPHN-213ENST00000556501 NHLH1Q02575 133 aa4.34□□□□□ -1.71
GPHN-213ENST00000556501 JOSD1Q15040 202 aaPredicted RBP4.34□□□□□ -1.71
GPHN-213ENST00000556501 PRSS8Q16651 343 aa4.34□□□□□ -1.71
GPHN-213ENST00000556501 RPEL1Q2QD12 228 aa4.34□□□□□ -1.71
GPHN-213ENST00000556501 TIGITQ495A1 244 aa4.34□□□□□ -1.71
GPHN-213ENST00000556501 FAM209BQ5JX69 171 aa4.34□□□□□ -1.71
GPHN-213ENST00000556501 MMD2Q8IY49 270 aa4.34□□□□□ -1.71
GPHN-213ENST00000556501 GBGT1Q8N5D6 347 aa4.34□□□□□ -1.71
GPHN-213ENST00000556501 C11orf42Q8N5U0 333 aa4.34□□□□□ -1.71
GPHN-213ENST00000556501 OR2T6Q8NHC8 308 aa4.34□□□□□ -1.71
GPHN-213ENST00000556501 C8orf46Q8TAG6 207 aa4.34□□□□□ -1.71
GPHN-213ENST00000556501 TMEM37Q8WXS4 190 aa4.34□□□□□ -1.71
GPHN-213ENST00000556501 TMEM18Q96B42 140 aa4.34□□□□□ -1.71
GPHN-213ENST00000556501 SCNM1Q9BWG6 230 aa4.34□□□□□ -1.71
GPHN-213ENST00000556501 SLC25A2Q9BXI2 301 aa4.34□□□□□ -1.71
GPHN-213ENST00000556501 DNAJC4Q9NNZ3 241 aa4.34□□□□□ -1.71
GPHN-213ENST00000556501 OSTCQ9NRP0 149 aa4.34□□□□□ -1.71
GPHN-213ENST00000556501 TPSG1Q9NRR2 321 aa4.34□□□□□ -1.71
GPHN-213ENST00000556501 RALYQ9UKM9 306 aaKnown RBP4.34□□□□□ -1.71
GPHN-213ENST00000556501 TRAPPC1Q9Y5R8 145 aa4.34□□□□□ -1.71
GPHN-213ENST00000556501 V9GYV3 84 aa4.34□□□□□ -1.71
GPHN-213ENST00000556501 ROS1P08922 2347 aa4.34□□□□□ -1.72
GPHN-213ENST00000556501 ANKHD1Q8IWZ3 2542 aaKnown RBP4.33□□□□□ -1.72
GPHN-213ENST00000556501 PCNX1Q96RV3 2341 aa4.33□□□□□ -1.72
GPHN-213ENST00000556501 TRBV9A0A0B4J1U6 114 aa4.33□□□□□ -1.72
GPHN-213ENST00000556501 HELTA6NFD8 242 aa4.33□□□□□ -1.72
GPHN-213ENST00000556501 SLC17A3O00476 420 aa4.33□□□□□ -1.72
GPHN-213ENST00000556501 GATCO43716 136 aaKnown RBP4.33□□□□□ -1.72
GPHN-213ENST00000556501 PLAUP00749 431 aa4.33□□□□□ -1.72
GPHN-213ENST00000556501 GCGP01275 180 aa4.33□□□□□ -1.72
GPHN-213ENST00000556501 IGLV2-8P01709 118 aa4.33□□□□□ -1.72
GPHN-213ENST00000556501 MT-ND6P03923 174 aa4.33□□□□□ -1.72
GPHN-213ENST00000556501 FAM87AP0C7U9 286 aa4.33□□□□□ -1.72
GPHN-213ENST00000556501 CRYBB3P26998 211 aa4.33□□□□□ -1.72
GPHN-213ENST00000556501 ADMP35318 185 aa4.33□□□□□ -1.72
GPHN-213ENST00000556501 COMPP49747 757 aaPredicted RBP4.33□□□□□ -1.72
GPHN-213ENST00000556501 PRRX1P54821 245 aa4.33□□□□□ -1.72
GPHN-213ENST00000556501 UCNP55089 124 aa4.33□□□□□ -1.72
GPHN-213ENST00000556501 CASP6P55212 293 aa4.33□□□□□ -1.72
GPHN-213ENST00000556501 TAS2R60P59551 318 aa4.33□□□□□ -1.72
GPHN-213ENST00000556501 PKIAP61925 76 aa4.33□□□□□ -1.72
GPHN-213ENST00000556501 ZNF90Q03938 601 aa4.33□□□□□ -1.72
GPHN-213ENST00000556501 MLANAQ16655 118 aa4.33□□□□□ -1.72
GPHN-213ENST00000556501 ZNF672Q499Z4 452 aaPredicted RBP4.33□□□□□ -1.72
GPHN-213ENST00000556501 COX19Q49B96 90 aa4.33□□□□□ -1.72
GPHN-213ENST00000556501 C9orf152Q5JTZ5 239 aa4.33□□□□□ -1.72
GPHN-213ENST00000556501 MORN5Q5VZ52 161 aa4.33□□□□□ -1.72
GPHN-213ENST00000556501 C10orf113Q5VZT2 155 aa4.33□□□□□ -1.72
GPHN-213ENST00000556501 ETFRF1Q6IPR1 90 aa4.33□□□□□ -1.72
GPHN-213ENST00000556501 PATE2Q6UY27 113 aa4.33□□□□□ -1.72
GPHN-213ENST00000556501 ZNF841Q6ZN19 808 aa4.33□□□□□ -1.72
GPHN-213ENST00000556501 BEND2Q8NDZ0 799 aa4.33□□□□□ -1.72
GPHN-213ENST00000556501 OR5AU1Q8NGC0 362 aa4.33□□□□□ -1.72
GPHN-213ENST00000556501 NPIPB3Q92617 1050 aa4.33□□□□□ -1.72
GPHN-213ENST00000556501 FANCD2OSQ96PS1 177 aa4.33□□□□□ -1.72
GPHN-213ENST00000556501 TRGV9Q99603 122 aa4.33□□□□□ -1.72
GPHN-213ENST00000556501 PAXXQ9BUH6 204 aa4.33□□□□□ -1.72
GPHN-213ENST00000556501 CLEC7AQ9BXN2 247 aa4.33□□□□□ -1.72
GPHN-213ENST00000556501 ZNF355PQ9NSJ1 428 aa4.33□□□□□ -1.72
GPHN-213ENST00000556501 MRPL36Q9P0J6 103 aaKnown RBP4.33□□□□□ -1.72
GPHN-213ENST00000556501 CDC42EP3Q9UKI2 254 aa4.33□□□□□ -1.72
GPHN-213ENST00000556501 AMMECR1Q9Y4X0 333 aaPredicted RBP4.33□□□□□ -1.72
GPHN-213ENST00000556501 DCHS1Q96JQ0 3298 aa4.32□□□□□ -1.72
GPHN-213ENST00000556501 MALRD1Q5VYJ5 2156 aa4.32□□□□□ -1.72
GPHN-213ENST00000556501 TRAV5A0A0B4J249 113 aa4.32□□□□□ -1.72
GPHN-213ENST00000556501 IGHV1-3A0A0C4DH29 117 aa4.32□□□□□ -1.72
GPHN-213ENST00000556501 FAM90A27PA6NNH2 459 aa4.32□□□□□ -1.72
GPHN-213ENST00000556501 TEX22C9J3V5 150 aa4.32□□□□□ -1.72
GPHN-213ENST00000556501 C22orf46C9J442 243 aa4.32□□□□□ -1.72
GPHN-213ENST00000556501 TSTD3H0UI37 97 aa4.32□□□□□ -1.72
GPHN-213ENST00000556501 LY6LH3BQJ8 138 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms