RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 OR4C16Q8NGL9 310 aa9.38□□□□□ -0.91
SNX6-207ENST00000556303 RNASE11Q8TAA1 199 aaKnown RBP9.38□□□□□ -0.91
SNX6-207ENST00000556303 IL22RA2Q969J5 263 aa9.38□□□□□ -0.91
SNX6-207ENST00000556303 GALNT14Q96FL9 552 aa9.38□□□□□ -0.91
SNX6-207ENST00000556303 ZNF414Q96IQ9 312 aa9.38□□□□□ -0.91
SNX6-207ENST00000556303 SOSTQ9BQB4 213 aa9.38□□□□□ -0.91
SNX6-207ENST00000556303 SLIRPQ9GZT3 109 aaKnown RBP9.38□□□□□ -0.91
SNX6-207ENST00000556303 C6orf62Q9GZU0 229 aaPredicted RBP9.38□□□□□ -0.91
SNX6-207ENST00000556303 RETNQ9HD89 108 aa9.38□□□□□ -0.91
SNX6-207ENST00000556303 KCNIP3Q9Y2W7 256 aa9.38□□□□□ -0.91
SNX6-207ENST00000556303 TMEM56-RWDD3S4R434 201 aa9.38□□□□□ -0.91
SNX6-207ENST00000556303 TRAV30A0A087WSZ9 112 aa9.37□□□□□ -0.91
SNX6-207ENST00000556303 TRAV2A0A0B4J234 112 aa9.37□□□□□ -0.91
SNX6-207ENST00000556303 LCE6AA0A183 80 aa9.37□□□□□ -0.91
SNX6-207ENST00000556303 ANKRD20A5PA0PJZ0 165 aa9.37□□□□□ -0.91
SNX6-207ENST00000556303 TMEM50AO95807 157 aa9.37□□□□□ -0.91
SNX6-207ENST00000556303 OR5AC1P0C628 307 aa9.37□□□□□ -0.91
SNX6-207ENST00000556303 ETV6P41212 452 aa9.37□□□□□ -0.91
SNX6-207ENST00000556303 HOXA1P49639 335 aaPredicted RBP9.37□□□□□ -0.91
SNX6-207ENST00000556303 FAM90A2PQ658T7 463 aa9.37□□□□□ -0.91
SNX6-207ENST00000556303 ZFAND6Q6FIF0 208 aa9.37□□□□□ -0.91
SNX6-207ENST00000556303 TOMM20LQ6UXN7 152 aa9.37□□□□□ -0.91
SNX6-207ENST00000556303 NOXA1Q86UR1 476 aa9.37□□□□□ -0.91
SNX6-207ENST00000556303 OR4X1Q8NH49 305 aa9.37□□□□□ -0.91
SNX6-207ENST00000556303 RNF2Q99496 336 aa9.37□□□□□ -0.91
SNX6-207ENST00000556303 OVOL2Q9BRP0 275 aa9.37□□□□□ -0.91
SNX6-207ENST00000556303 VSIRQ9H7M9 311 aa9.37□□□□□ -0.91
SNX6-207ENST00000556303 SELENOKQ9Y6D0 94 aa9.37□□□□□ -0.91
SNX6-207ENST00000556303 RPS10-NUDT3A0A1W2PQS6 291 aa9.36□□□□□ -0.91
SNX6-207ENST00000556303 FABP12A6NFH5 140 aa9.36□□□□□ -0.91
SNX6-207ENST00000556303 ZNF207O43670 478 aaKnown RBP9.36□□□□□ -0.91
SNX6-207ENST00000556303 CLN5O75503 358 aa9.36□□□□□ -0.91
SNX6-207ENST00000556303 ATF4P18848 351 aaPredicted RBP9.36□□□□□ -0.91
SNX6-207ENST00000556303 ODF3L2Q3SX64 289 aa9.36□□□□□ -0.91
SNX6-207ENST00000556303 SPINK9Q5DT21 86 aa9.36□□□□□ -0.91
SNX6-207ENST00000556303 Q6ZRM9 215 aa9.36□□□□□ -0.91
SNX6-207ENST00000556303 SELENOHQ8IZQ5 122 aaKnown RBP9.36□□□□□ -0.91
SNX6-207ENST00000556303 OR51S1Q8NGJ8 323 aa9.36□□□□□ -0.91
SNX6-207ENST00000556303 DEDD2Q8WXF8 326 aa9.36□□□□□ -0.91
SNX6-207ENST00000556303 TMEM231Q9H6L2 316 aa9.36□□□□□ -0.91
SNX6-207ENST00000556303 IGHV3OR16-8A0A075B7F1 116 aa9.35□□□□□ -0.91
SNX6-207ENST00000556303 A0A0G2JRQ6 117 aa9.35□□□□□ -0.91
SNX6-207ENST00000556303 A0A1W2PS18 150 aa9.35□□□□□ -0.91
SNX6-207ENST00000556303 H3BMQ9 156 aa9.35□□□□□ -0.91
SNX6-207ENST00000556303 DFFBO76075 338 aa9.35□□□□□ -0.91
SNX6-207ENST00000556303 TNFSF8P32971 234 aa9.35□□□□□ -0.91
SNX6-207ENST00000556303 FAUP35544 74 aaKnown RBP9.35□□□□□ -0.91
SNX6-207ENST00000556303 C2orf83Q53S99 150 aa9.35□□□□□ -0.91
SNX6-207ENST00000556303 FAAP20Q6NZ36 180 aa9.35□□□□□ -0.91
SNX6-207ENST00000556303 STPG3Q8N7X2 389 aa9.35□□□□□ -0.91
SNX6-207ENST00000556303 RNASEH2CQ8TDP1 164 aaKnown RBP9.35□□□□□ -0.91
SNX6-207ENST00000556303 PUS1Q9Y606 427 aaKnown RBP eCLIP9.35□□□□□ -0.91
SNX6-207ENST00000556303 A0A0B4J2A0 478 aa9.34□□□□□ -0.91
SNX6-207ENST00000556303 SPRY2O43597 315 aa9.34□□□□□ -0.91
SNX6-207ENST00000556303 IGHV3-48P01763 117 aa9.34□□□□□ -0.91
SNX6-207ENST00000556303 SLC25A4P12235 298 aa9.34□□□□□ -0.91
SNX6-207ENST00000556303 ANXA3P12429 323 aa9.34□□□□□ -0.91
SNX6-207ENST00000556303 NPPCP23582 126 aa9.34□□□□□ -0.91
SNX6-207ENST00000556303 OPRK1P41145 380 aa9.34□□□□□ -0.91
SNX6-207ENST00000556303 ATP5IP56385 69 aaPredicted RBP9.34□□□□□ -0.91
SNX6-207ENST00000556303 AP3S2P59780 193 aa9.34□□□□□ -0.91
SNX6-207ENST00000556303 SRPXP78539 464 aa9.34□□□□□ -0.91
SNX6-207ENST00000556303 TNFRSF9Q07011 255 aa9.34□□□□□ -0.91
SNX6-207ENST00000556303 TMEM187Q14656 261 aa9.34□□□□□ -0.91
SNX6-207ENST00000556303 TMEM268Q5VZI3 342 aa9.34□□□□□ -0.91
SNX6-207ENST00000556303 ETFRF1Q6IPR1 90 aa9.34□□□□□ -0.91
SNX6-207ENST00000556303 MCFD2Q8NI22 146 aa9.34□□□□□ -0.91
SNX6-207ENST00000556303 LHFPL5Q8TAF8 219 aa9.34□□□□□ -0.91
SNX6-207ENST00000556303 GPR146Q96CH1 333 aa9.34□□□□□ -0.91
SNX6-207ENST00000556303 FNDC4Q9H6D8 234 aaPredicted RBP9.34□□□□□ -0.91
SNX6-207ENST00000556303 ZFAND3Q9H8U3 227 aa9.34□□□□□ -0.91
SNX6-207ENST00000556303 HEYLQ9NQ87 328 aaPredicted RBP9.34□□□□□ -0.91
SNX6-207ENST00000556303 UBQLN2Q9UHD9 624 aa9.34□□□□□ -0.91
SNX6-207ENST00000556303 SHPKQ9UHJ6 478 aa9.34□□□□□ -0.91
SNX6-207ENST00000556303 U3KQ87 197 aa9.34□□□□□ -0.91
SNX6-207ENST00000556303 SULT1A3P0DMM9 295 aa9.33□□□□□ -0.92
SNX6-207ENST00000556303 SULT1A4P0DMN0 295 aa9.33□□□□□ -0.92
SNX6-207ENST00000556303 CRYBB3P26998 211 aa9.33□□□□□ -0.92
SNX6-207ENST00000556303 NMSQ5H8A3 153 aa9.33□□□□□ -0.92
SNX6-207ENST00000556303 TCF24Q7RTU0 167 aa9.33□□□□□ -0.92
SNX6-207ENST00000556303 RNF183Q96D59 192 aa9.33□□□□□ -0.92
SNX6-207ENST00000556303 NARS2Q96I59 477 aaKnown RBP9.33□□□□□ -0.92
SNX6-207ENST00000556303 METTL26Q96S19 204 aa9.33□□□□□ -0.92
SNX6-207ENST00000556303 MAP6D1Q9H9H5 199 aa9.33□□□□□ -0.92
SNX6-207ENST00000556303 CACNG5Q9UF02 275 aa9.33□□□□□ -0.92
SNX6-207ENST00000556303 ALMS1Q8TCU4 4167 aa9.33□□□□□ -0.92
SNX6-207ENST00000556303 HYDINQ4G0P3 5121 aa9.33□□□□□ -0.92
SNX6-207ENST00000556303 A0A1B0GU03 582 aa9.32□□□□□ -0.92
SNX6-207ENST00000556303 DUXBA0A1W2PPF3 345 aa9.32□□□□□ -0.92
SNX6-207ENST00000556303 CEBPZOSA8MTT3 80 aa9.32□□□□□ -0.92
SNX6-207ENST00000556303 JTBO76095 146 aa9.32□□□□□ -0.92
SNX6-207ENST00000556303 CCR6P51684 374 aa9.32□□□□□ -0.92
SNX6-207ENST00000556303 YPEL3P61236 119 aaPredicted RBP9.32□□□□□ -0.92
SNX6-207ENST00000556303 LGI3Q8N145 548 aa9.32□□□□□ -0.92
SNX6-207ENST00000556303 TMEM217Q8N7C4 229 aa9.32□□□□□ -0.92
SNX6-207ENST00000556303 SLC24A4Q8NFF2 622 aa9.32□□□□□ -0.92
SNX6-207ENST00000556303 OR1S2Q8NGQ3 325 aa9.32□□□□□ -0.92
SNX6-207ENST00000556303 GATAD1Q8WUU5 269 aa9.32□□□□□ -0.92
SNX6-207ENST00000556303 ST8SIA2Q92186 375 aa9.32□□□□□ -0.92
SNX6-207ENST00000556303 TMEM230Q96A57 120 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms