RNA–Protein interactions for RNA: ENST00000556071.5

LINC00871-202, long intergenic non-protein coding RNA 871, humanhuman

TSL 3 BASIC

Gene LINC00871, Length 554 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-202ENST00000556071 TOMM6Q96B49 74 aa0.63□□□□□ -2.31
LINC00871-202ENST00000556071 PPP1R2P1Q96PQ5 205 aa0.63□□□□□ -2.31
LINC00871-202ENST00000556071 AMELYQ99218 206 aa0.63□□□□□ -2.31
LINC00871-202ENST00000556071 COMMD5Q9GZQ3 224 aa0.63□□□□□ -2.31
LINC00871-202ENST00000556071 SLC39A9Q9NUM3 307 aa0.63□□□□□ -2.31
LINC00871-202ENST00000556071 ERGIC3Q9Y282 383 aa0.63□□□□□ -2.31
LINC00871-202ENST00000556071 PKIGQ9Y2B9 76 aa0.63□□□□□ -2.31
LINC00871-202ENST00000556071 ZNF462Q96JM2 2506 aa0.63□□□□□ -2.31
LINC00871-202ENST00000556071 ZNF106Q9H2Y7 1883 aaKnown RBP0.63□□□□□ -2.31
LINC00871-202ENST00000556071 ADGRB2O60241 1585 aa0.62□□□□□ -2.31
LINC00871-202ENST00000556071 PLXND1Q9Y4D7 1925 aa0.62□□□□□ -2.31
LINC00871-202ENST00000556071 MUC5BQ9HC84 5762 aaPredicted RBP0.62□□□□□ -2.31
LINC00871-202ENST00000556071 CETN3O15182 167 aa0.62□□□□□ -2.31
LINC00871-202ENST00000556071 INE1O15225 51 aa0.62□□□□□ -2.31
LINC00871-202ENST00000556071 TCL1BO95988 128 aa0.62□□□□□ -2.31
LINC00871-202ENST00000556071 TNNC2P02585 160 aa0.62□□□□□ -2.31
LINC00871-202ENST00000556071 HIST1H1TP22492 207 aaPredicted RBP0.62□□□□□ -2.31
LINC00871-202ENST00000556071 LPCAT3Q6P1A2 487 aa0.62□□□□□ -2.31
LINC00871-202ENST00000556071 C20orf196Q8IYI0 205 aa0.62□□□□□ -2.31
LINC00871-202ENST00000556071 HIST3H2BBQ8N257 126 aa0.62□□□□□ -2.31
LINC00871-202ENST00000556071 EXOC1LA0A1B0GW35 172 aa0.61□□□□□ -2.31
LINC00871-202ENST00000556071 PSMD12O00232 456 aaPredicted RBP0.61□□□□□ -2.31
LINC00871-202ENST00000556071 IFNA10P01566 189 aa0.61□□□□□ -2.31
LINC00871-202ENST00000556071 RPS20P60866 119 aaKnown RBP0.61□□□□□ -2.31
LINC00871-202ENST00000556071 SPCS3P61009 180 aa0.61□□□□□ -2.31
LINC00871-202ENST00000556071 HIST3H3Q16695 136 aa0.61□□□□□ -2.31
LINC00871-202ENST00000556071 CDKL4Q5MAI5 379 aa0.61□□□□□ -2.31
LINC00871-202ENST00000556071 ANKRD29Q8N6D5 301 aa0.61□□□□□ -2.31
LINC00871-202ENST00000556071 TRAV9-1A0A075B6T8 112 aa0.6□□□□□ -2.31
LINC00871-202ENST00000556071 TRAV12-1A0A0B4J245 112 aa0.6□□□□□ -2.31
LINC00871-202ENST00000556071 CLDN25C9JDP6 229 aa0.6□□□□□ -2.31
LINC00871-202ENST00000556071 KCNK1O00180 336 aa0.6□□□□□ -2.31
LINC00871-202ENST00000556071 SULT1B1O43704 296 aa0.6□□□□□ -2.31
LINC00871-202ENST00000556071 HIST1H1EP10412 219 aaKnown RBP0.6□□□□□ -2.31
LINC00871-202ENST00000556071 ZNF25P17030 456 aaPredicted RBP0.6□□□□□ -2.31
LINC00871-202ENST00000556071 RPL5P46777 297 aaKnown RBP0.6□□□□□ -2.31
LINC00871-202ENST00000556071 DEFA1P59665 94 aa0.6□□□□□ -2.31
LINC00871-202ENST00000556071 CDC42P60953 191 aa0.6□□□□□ -2.31
LINC00871-202ENST00000556071 C8orf74Q6P047 294 aa0.6□□□□□ -2.31
LINC00871-202ENST00000556071 OR52R1Q8NGF1 315 aa0.6□□□□□ -2.31
LINC00871-202ENST00000556071 OR52E6Q96RD3 313 aa0.6□□□□□ -2.31
LINC00871-202ENST00000556071 MRPS26Q9BYN8 205 aaKnown RBP0.6□□□□□ -2.31
LINC00871-202ENST00000556071 ECM29Q5VYK3 1845 aa0.59□□□□□ -2.31
LINC00871-202ENST00000556071 CD79AP11912 226 aa0.59□□□□□ -2.31
LINC00871-202ENST00000556071 PSME3P61289 254 aa0.59□□□□□ -2.31
LINC00871-202ENST00000556071 OR2F1Q13607 317 aa0.59□□□□□ -2.31
LINC00871-202ENST00000556071 C1orf137Q5JT78 98 aa0.59□□□□□ -2.31
LINC00871-202ENST00000556071 CDC42SE1Q9NRR8 79 aa0.59□□□□□ -2.31
LINC00871-202ENST00000556071 TMEM56-RWDD3S4R434 201 aa0.59□□□□□ -2.31
LINC00871-202ENST00000556071 HECW1Q76N89 1606 aa0.59□□□□□ -2.32
LINC00871-202ENST00000556071 HEATR1Q9H583 2144 aaKnown RBP0.59□□□□□ -2.32
LINC00871-202ENST00000556071 MTUS2Q5JR59 1369 aa0.58□□□□□ -2.32
LINC00871-202ENST00000556071 MAP3K5Q99683 1374 aa0.58□□□□□ -2.32
LINC00871-202ENST00000556071 WRNQ14191 1432 aaPredicted RBP eCLIP0.58□□□□□ -2.32
LINC00871-202ENST00000556071 TRAV3A0A0B4J244 114 aa0.58□□□□□ -2.32
LINC00871-202ENST00000556071 PHGR1C9JFL3 82 aa0.58□□□□□ -2.32
LINC00871-202ENST00000556071 OR2B3O76000 313 aa0.58□□□□□ -2.32
LINC00871-202ENST00000556071 DEFB113Q30KQ7 82 aa0.58□□□□□ -2.32
LINC00871-202ENST00000556071 TEX261Q6UWH6 196 aa0.57□□□□□ -2.32
LINC00871-202ENST00000556071 OR10J5Q8NHC4 309 aa0.57□□□□□ -2.32
LINC00871-202ENST00000556071 GPR146Q96CH1 333 aa0.57□□□□□ -2.32
LINC00871-202ENST00000556071 TSPAN32Q96QS1 320 aa0.57□□□□□ -2.32
LINC00871-202ENST00000556071 OSTCQ9NRP0 149 aa0.57□□□□□ -2.32
LINC00871-202ENST00000556071 RASL12Q9NYN1 266 aa0.57□□□□□ -2.32
LINC00871-202ENST00000556071 GUCA1BQ9UMX6 200 aa0.57□□□□□ -2.32
LINC00871-202ENST00000556071 U3KQ87 197 aa0.57□□□□□ -2.32
LINC00871-202ENST00000556071 PEAK1Q9H792 1746 aa0.56□□□□□ -2.32
LINC00871-202ENST00000556071 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.56□□□□□ -2.32
LINC00871-202ENST00000556071 OR2J2O76002 312 aa0.56□□□□□ -2.32
LINC00871-202ENST00000556071 MPV17LQ2QL34 196 aa0.56□□□□□ -2.32
LINC00871-202ENST00000556071 SOSTDC1Q6X4U4 206 aa0.56□□□□□ -2.32
LINC00871-202ENST00000556071 C3orf56Q8N813 242 aa0.56□□□□□ -2.32
LINC00871-202ENST00000556071 OR13D1Q8NGV5 346 aa0.56□□□□□ -2.32
LINC00871-202ENST00000556071 BORCS5Q969J3 196 aa0.56□□□□□ -2.32
LINC00871-202ENST00000556071 MRPL27Q9P0M9 148 aaKnown RBP0.56□□□□□ -2.32
LINC00871-202ENST00000556071 HS3ST2Q9Y278 367 aa0.56□□□□□ -2.32
LINC00871-202ENST00000556071 MUC5ACP98088 5654 aa0.56□□□□□ -2.32
LINC00871-202ENST00000556071 SBF1O95248 1867 aa0.56□□□□□ -2.32
LINC00871-202ENST00000556071 NUP155O75694 1391 aa0.56□□□□□ -2.32
LINC00871-202ENST00000556071 E9PCH4 1651 aa0.56□□□□□ -2.32
LINC00871-202ENST00000556071 HECW2Q9P2P5 1572 aa0.55□□□□□ -2.32
LINC00871-202ENST00000556071 CCDC160A6NGH7 325 aa0.55□□□□□ -2.32
LINC00871-202ENST00000556071 OR4C46A6NHA9 309 aa0.55□□□□□ -2.32
LINC00871-202ENST00000556071 PROSCO94903 275 aa0.55□□□□□ -2.32
LINC00871-202ENST00000556071 IFNA5P01569 189 aa0.55□□□□□ -2.32
LINC00871-202ENST00000556071 MAGOHP61326 146 aaKnown RBP0.55□□□□□ -2.32
LINC00871-202ENST00000556071 COTL1Q14019 142 aa0.55□□□□□ -2.32
LINC00871-202ENST00000556071 ACOT6Q3I5F7 207 aaPredicted RBP0.55□□□□□ -2.32
LINC00871-202ENST00000556071 SPOPLQ6IQ16 392 aa0.55□□□□□ -2.32
LINC00871-202ENST00000556071 DDI1Q8WTU0 396 aa0.55□□□□□ -2.32
LINC00871-202ENST00000556071 TMEM70Q9BUB7 260 aa0.55□□□□□ -2.32
LINC00871-202ENST00000556071 KIAA1549Q9HCM3 1950 aa0.54□□□□□ -2.32
LINC00871-202ENST00000556071 SCN10AQ9Y5Y9 1956 aa0.54□□□□□ -2.32
LINC00871-202ENST00000556071 ZNF736B4DX44 427 aaPredicted RBP0.54□□□□□ -2.32
LINC00871-202ENST00000556071 NCR3O14931 201 aa0.54□□□□□ -2.32
LINC00871-202ENST00000556071 CRYZL1O95825 349 aa0.54□□□□□ -2.32
LINC00871-202ENST00000556071 SLC35A3Q9Y2D2 325 aa0.54□□□□□ -2.32
LINC00871-202ENST00000556071 SNAPC4Q5SXM2 1469 aa0.54□□□□□ -2.32
LINC00871-202ENST00000556071 MYH10P35580 1976 aa0.54□□□□□ -2.32
LINC00871-202ENST00000556071 TAF1LQ8IZX4 1826 aa0.53□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms