RNA–Protein interactions for RNA: ENST00000555934.1

LINC00643-204, long intergenic non-protein coding RNA 643, humanhuman

TSL 2

Gene LINC00643, Length 1,184 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-204ENST00000555934 DUXBA0A1W2PPF3 345 aa2.5□□□□□ -2.01
LINC00643-204ENST00000555934 M0R381 172 aa2.5□□□□□ -2.01
LINC00643-204ENST00000555934 SLC22A1O15245 554 aa2.5□□□□□ -2.01
LINC00643-204ENST00000555934 GNG7O60262 68 aa2.5□□□□□ -2.01
LINC00643-204ENST00000555934 APOMO95445 188 aa2.5□□□□□ -2.01
LINC00643-204ENST00000555934 IFNA7P01567 189 aa2.5□□□□□ -2.01
LINC00643-204ENST00000555934 PPIBP23284 216 aaKnown RBP2.5□□□□□ -2.01
LINC00643-204ENST00000555934 CMPK1P30085 196 aa2.5□□□□□ -2.01
LINC00643-204ENST00000555934 OR10J1P30954 320 aa2.5□□□□□ -2.01
LINC00643-204ENST00000555934 EVX1P49640 407 aa2.5□□□□□ -2.01
LINC00643-204ENST00000555934 TAS2R30P59541 319 aa2.5□□□□□ -2.01
LINC00643-204ENST00000555934 MAXP61244 160 aa2.5□□□□□ -2.01
LINC00643-204ENST00000555934 PSG9Q00887 426 aa2.5□□□□□ -2.01
LINC00643-204ENST00000555934 HIST1H1AQ02539 215 aaPredicted RBP2.5□□□□□ -2.01
LINC00643-204ENST00000555934 SCGB2B2Q4G0G5 96 aa2.5□□□□□ -2.01
LINC00643-204ENST00000555934 EBLN2Q6P2I7 272 aa2.5□□□□□ -2.01
LINC00643-204ENST00000555934 OR4C6Q8NH72 309 aa2.5□□□□□ -2.01
LINC00643-204ENST00000555934 SLC25A40Q8TBP6 338 aa2.5□□□□□ -2.01
LINC00643-204ENST00000555934 ARL11Q969Q4 196 aa2.5□□□□□ -2.01
LINC00643-204ENST00000555934 ADAT3Q96EY9 351 aaPredicted RBP2.5□□□□□ -2.01
LINC00643-204ENST00000555934 C20orf166-AS1Q96NR2 134 aa2.5□□□□□ -2.01
LINC00643-204ENST00000555934 NMNAT3Q96T66 252 aa2.5□□□□□ -2.01
LINC00643-204ENST00000555934 LXNQ9BS40 222 aa2.5□□□□□ -2.01
LINC00643-204ENST00000555934 PDCD10Q9BUL8 212 aa2.5□□□□□ -2.01
LINC00643-204ENST00000555934 SMIM3Q9BZL3 60 aa2.5□□□□□ -2.01
LINC00643-204ENST00000555934 OR2H1Q9GZK4 316 aa2.5□□□□□ -2.01
LINC00643-204ENST00000555934 GTSF1LQ9H1H1 148 aa2.5□□□□□ -2.01
LINC00643-204ENST00000555934 MED28Q9H204 178 aa2.5□□□□□ -2.01
LINC00643-204ENST00000555934 CXorf21Q9HAI6 301 aa2.5□□□□□ -2.01
LINC00643-204ENST00000555934 ERG28Q9UKR5 140 aa2.5□□□□□ -2.01
LINC00643-204ENST00000555934 COQ4Q9Y3A0 265 aa2.5□□□□□ -2.01
LINC00643-204ENST00000555934 FAM135BQ49AJ0 1406 aa2.5□□□□□ -2.01
LINC00643-204ENST00000555934 KMT2EQ8IZD2 1858 aa2.5□□□□□ -2.01
LINC00643-204ENST00000555934 NAV1Q8NEY1 1877 aa2.5□□□□□ -2.01
LINC00643-204ENST00000555934 IBTKQ9P2D0 1353 aaPredicted RBP2.49□□□□□ -2.01
LINC00643-204ENST00000555934 MYO5BQ9ULV0 1848 aa2.49□□□□□ -2.01
LINC00643-204ENST00000555934 TRPM3Q9HCF6 1732 aaPredicted RBP2.49□□□□□ -2.01
LINC00643-204ENST00000555934 TRBV19A0A075B6N1 114 aa2.49□□□□□ -2.01
LINC00643-204ENST00000555934 LOC102725191A0A1B0GVB3 256 aa2.49□□□□□ -2.01
LINC00643-204ENST00000555934 A0A1B0GVG6 124 aa2.49□□□□□ -2.01
LINC00643-204ENST00000555934 C9JAW5 83 aa2.49□□□□□ -2.01
LINC00643-204ENST00000555934 CLDN25C9JDP6 229 aa2.49□□□□□ -2.01
LINC00643-204ENST00000555934 F6UZH7 168 aa2.49□□□□□ -2.01
LINC00643-204ENST00000555934 M0R2Z0 102 aa2.49□□□□□ -2.01
LINC00643-204ENST00000555934 DEDDO75618 318 aa2.49□□□□□ -2.01
LINC00643-204ENST00000555934 HLA-DQB2P05538 268 aa2.49□□□□□ -2.01
LINC00643-204ENST00000555934 SMIM17P0DL12 118 aa2.49□□□□□ -2.01
LINC00643-204ENST00000555934 EVI2AP22794 236 aa2.49□□□□□ -2.01
LINC00643-204ENST00000555934 KDELR1P24390 212 aa2.49□□□□□ -2.01
LINC00643-204ENST00000555934 RPL35P42766 123 aaKnown RBP2.49□□□□□ -2.01
LINC00643-204ENST00000555934 GABRA2P47869 451 aa2.49□□□□□ -2.01
LINC00643-204ENST00000555934 AKR1D1P51857 326 aa2.49□□□□□ -2.01
LINC00643-204ENST00000555934 NCS1P62166 190 aa2.49□□□□□ -2.01
LINC00643-204ENST00000555934 SELENOWP63302 87 aa2.49□□□□□ -2.01
LINC00643-204ENST00000555934 MRPS10P82664 201 aaKnown RBP2.49□□□□□ -2.01
LINC00643-204ENST00000555934 GNA12Q03113 381 aa2.49□□□□□ -2.01
LINC00643-204ENST00000555934 CAV1Q03135 178 aa2.49□□□□□ -2.01
LINC00643-204ENST00000555934 BSPH1Q075Z2 132 aa2.49□□□□□ -2.01
LINC00643-204ENST00000555934 C12orf45Q8N5I9 185 aaPredicted RBP2.49□□□□□ -2.01
LINC00643-204ENST00000555934 TMEM229BQ8NBD8 167 aa2.49□□□□□ -2.01
LINC00643-204ENST00000555934 NUP35Q8NFH5 326 aa2.49□□□□□ -2.01
LINC00643-204ENST00000555934 SLC7A6Q92536 515 aa2.49□□□□□ -2.01
LINC00643-204ENST00000555934 PPP3R2Q96LZ3 170 aa2.49□□□□□ -2.01
LINC00643-204ENST00000555934 TP53RKQ96S44 253 aa2.49□□□□□ -2.01
LINC00643-204ENST00000555934 LINC00470Q9BZP3 86 aa2.49□□□□□ -2.01
LINC00643-204ENST00000555934 YIPF3Q9GZM5 350 aa2.49□□□□□ -2.01
LINC00643-204ENST00000555934 LPAR5Q9H1C0 372 aa2.49□□□□□ -2.01
LINC00643-204ENST00000555934 LAMTOR3Q9UHA4 124 aa2.49□□□□□ -2.01
LINC00643-204ENST00000555934 TRAPPC2LQ9UL33 140 aa2.49□□□□□ -2.01
LINC00643-204ENST00000555934 HIGD1AQ9Y241 93 aa2.49□□□□□ -2.01
LINC00643-204ENST00000555934 CYSLTR1Q9Y271 337 aa2.49□□□□□ -2.01
LINC00643-204ENST00000555934 LAMTOR2Q9Y2Q5 125 aa2.49□□□□□ -2.01
LINC00643-204ENST00000555934 MED31Q9Y3C7 131 aa2.49□□□□□ -2.01
LINC00643-204ENST00000555934 NCAPD3P42695 1498 aa2.49□□□□□ -2.01
LINC00643-204ENST00000555934 TNS3Q68CZ2 1445 aa2.49□□□□□ -2.01
LINC00643-204ENST00000555934 DOCK3Q8IZD9 2030 aa2.49□□□□□ -2.01
LINC00643-204ENST00000555934 NALCNQ8IZF0 1738 aa2.48□□□□□ -2.01
LINC00643-204ENST00000555934 RAPGEF2Q9Y4G8 1499 aa2.48□□□□□ -2.01
LINC00643-204ENST00000555934 IGHV3OR15-7A0A075B7D8 119 aa2.48□□□□□ -2.01
LINC00643-204ENST00000555934 A0A0J9YY10 115 aa2.48□□□□□ -2.01
LINC00643-204ENST00000555934 TMEM269A0A1B0GVZ9 245 aa2.48□□□□□ -2.01
LINC00643-204ENST00000555934 A0A1B0GX78 115 aa2.48□□□□□ -2.01
LINC00643-204ENST00000555934 GSTZ1O43708 216 aaPredicted RBP2.48□□□□□ -2.01
LINC00643-204ENST00000555934 GGCTO75223 188 aaKnown RBP2.48□□□□□ -2.01
LINC00643-204ENST00000555934 OR2H2O95918 312 aa2.48□□□□□ -2.01
LINC00643-204ENST00000555934 SCTP09683 121 aa2.48□□□□□ -2.01
LINC00643-204ENST00000555934 LINC00313P59037 77 aa2.48□□□□□ -2.01
LINC00643-204ENST00000555934 OR8G1Q15617 311 aa2.48□□□□□ -2.01
LINC00643-204ENST00000555934 OCIAD2Q56VL3 154 aa2.48□□□□□ -2.01
LINC00643-204ENST00000555934 SCIMPQ6UWF3 145 aa2.48□□□□□ -2.01
LINC00643-204ENST00000555934 HRCT1Q6UXD1 115 aa2.48□□□□□ -2.01
LINC00643-204ENST00000555934 Q6ZS49 121 aa2.48□□□□□ -2.01
LINC00643-204ENST00000555934 DEFB128Q7Z7B8 93 aa2.48□□□□□ -2.01
LINC00643-204ENST00000555934 BAP18Q8IXM2 172 aa2.48□□□□□ -2.01
LINC00643-204ENST00000555934 OR8I2Q8N0Y5 310 aa2.48□□□□□ -2.01
LINC00643-204ENST00000555934 ISOC1Q96CN7 298 aa2.48□□□□□ -2.01
LINC00643-204ENST00000555934 MS4A6EQ96DS6 147 aa2.48□□□□□ -2.01
LINC00643-204ENST00000555934 GNPNAT1Q96EK6 184 aaPredicted RBP2.48□□□□□ -2.01
LINC00643-204ENST00000555934 ABHD14BQ96IU4 210 aa2.48□□□□□ -2.01
LINC00643-204ENST00000555934 ERMAPQ96PL5 475 aaPredicted RBP2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms