RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 DPRXA6NFQ7 191 aa0.12□□□□□ -2.39
SRP54-207ENST00000555535 C1orf196B1AJZ1 125 aa0.12□□□□□ -2.39
SRP54-207ENST00000555535 UBL3O95164 117 aa0.12□□□□□ -2.39
SRP54-207ENST00000555535 TCL1BO95988 128 aa0.12□□□□□ -2.39
SRP54-207ENST00000555535 FREM3P0C091 2139 aa0.12□□□□□ -2.39
SRP54-207ENST00000555535 MAGEA2P43356 314 aa0.12□□□□□ -2.39
SRP54-207ENST00000555535 CD151P48509 253 aa0.12□□□□□ -2.39
SRP54-207ENST00000555535 EFNA4P52798 201 aa0.12□□□□□ -2.39
SRP54-207ENST00000555535 DEFA3P59666 94 aa0.12□□□□□ -2.39
SRP54-207ENST00000555535 RHOGP84095 191 aa0.12□□□□□ -2.39
SRP54-207ENST00000555535 MPV17LQ2QL34 196 aa0.12□□□□□ -2.39
SRP54-207ENST00000555535 C8orf74Q6P047 294 aa0.12□□□□□ -2.39
SRP54-207ENST00000555535 LRRN1Q6UXK5 716 aa0.12□□□□□ -2.39
SRP54-207ENST00000555535 GKN2Q86XP6 184 aa0.12□□□□□ -2.39
SRP54-207ENST00000555535 HIST3H2BBQ8N257 126 aa0.12□□□□□ -2.39
SRP54-207ENST00000555535 ANKRD29Q8N6D5 301 aa0.12□□□□□ -2.39
SRP54-207ENST00000555535 SIGLECL1Q8N7X8 197 aa0.12□□□□□ -2.39
SRP54-207ENST00000555535 GPR32P1Q8NGA4 272 aa0.12□□□□□ -2.39
SRP54-207ENST00000555535 OR52R1Q8NGF1 315 aa0.12□□□□□ -2.39
SRP54-207ENST00000555535 PIGXQ8TBF5 258 aa0.12□□□□□ -2.39
SRP54-207ENST00000555535 GPR146Q96CH1 333 aa0.12□□□□□ -2.39
SRP54-207ENST00000555535 ATP6V1G3Q96LB4 118 aa0.12□□□□□ -2.39
SRP54-207ENST00000555535 NIT2Q9NQR4 276 aa0.12□□□□□ -2.39
SRP54-207ENST00000555535 FBXL12Q9NXK8 326 aa0.12□□□□□ -2.39
SRP54-207ENST00000555535 RASL12Q9NYN1 266 aa0.12□□□□□ -2.39
SRP54-207ENST00000555535 TAS2R4Q9NYW5 299 aa0.12□□□□□ -2.39
SRP54-207ENST00000555535 EPDR1Q9UM22 224 aa0.12□□□□□ -2.39
SRP54-207ENST00000555535 MYLKQ15746 1914 aa0.12□□□□□ -2.39
SRP54-207ENST00000555535 KIF1BO60333 1816 aa0.12□□□□□ -2.39
SRP54-207ENST00000555535 NAV3Q8IVL0 2385 aa0.12□□□□□ -2.39
SRP54-207ENST00000555535 RIC1Q4ADV7 1423 aa0.12□□□□□ -2.39
SRP54-207ENST00000555535 RAD50Q92878 1312 aa0.12□□□□□ -2.39
SRP54-207ENST00000555535 ABCC11Q96J66 1382 aa0.11□□□□□ -2.39
SRP54-207ENST00000555535 TRAV9-1A0A075B6T8 112 aa0.11□□□□□ -2.39
SRP54-207ENST00000555535 SMIM9A6NGZ8 99 aa0.11□□□□□ -2.39
SRP54-207ENST00000555535 ZNF736B4DX44 427 aaPredicted RBP0.11□□□□□ -2.39
SRP54-207ENST00000555535 EEF1E1-BLOC1S5C9J1V9 151 aa0.11□□□□□ -2.39
SRP54-207ENST00000555535 LYZL6O75951 148 aa0.11□□□□□ -2.39
SRP54-207ENST00000555535 PROSCO94903 275 aa0.11□□□□□ -2.39
SRP54-207ENST00000555535 DEXIO95424 95 aa0.11□□□□□ -2.39
SRP54-207ENST00000555535 CRYZL1O95825 349 aa0.11□□□□□ -2.39
SRP54-207ENST00000555535 CD2P06729 351 aa0.11□□□□□ -2.39
SRP54-207ENST00000555535 OCM2P0CE71 109 aa0.11□□□□□ -2.39
SRP54-207ENST00000555535 MYL12AP19105 171 aa0.11□□□□□ -2.39
SRP54-207ENST00000555535 AP2S1P53680 142 aaPredicted RBP0.11□□□□□ -2.39
SRP54-207ENST00000555535 RPS20P60866 119 aaKnown RBP0.11□□□□□ -2.39
SRP54-207ENST00000555535 PMAIP1Q13794 54 aa0.11□□□□□ -2.39
SRP54-207ENST00000555535 PDE6HQ13956 83 aa0.11□□□□□ -2.39
SRP54-207ENST00000555535 FAM74A1Q5RGS3 127 aa0.11□□□□□ -2.39
SRP54-207ENST00000555535 OGFRL1Q5TC84 451 aaPredicted RBP0.11□□□□□ -2.39
SRP54-207ENST00000555535 LPCAT3Q6P1A2 487 aa0.11□□□□□ -2.39
SRP54-207ENST00000555535 LINC00301Q8NCQ3 95 aa0.11□□□□□ -2.39
SRP54-207ENST00000555535 TERB2Q8NHR7 220 aa0.11□□□□□ -2.39
SRP54-207ENST00000555535 H1FXQ92522 213 aaKnown RBP0.11□□□□□ -2.39
SRP54-207ENST00000555535 PPP1R2P1Q96PQ5 205 aa0.11□□□□□ -2.39
SRP54-207ENST00000555535 OSTCQ9NRP0 149 aa0.11□□□□□ -2.39
SRP54-207ENST00000555535 TAS2R7Q9NYW3 318 aa0.11□□□□□ -2.39
SRP54-207ENST00000555535 SLC35A3Q9Y2D2 325 aa0.11□□□□□ -2.39
SRP54-207ENST00000555535 V9GYY5 206 aaPredicted RBP0.11□□□□□ -2.39
SRP54-207ENST00000555535 DOCK4Q8N1I0 1966 aa0.11□□□□□ -2.39
SRP54-207ENST00000555535 ZDBF2Q9HCK1 2354 aa0.11□□□□□ -2.39
SRP54-207ENST00000555535 MGAMO43451 1857 aa0.1□□□□□ -2.39
SRP54-207ENST00000555535 N4BP2Q86UW6 1770 aaPredicted RBP0.1□□□□□ -2.39
SRP54-207ENST00000555535 TRAV12-1A0A0B4J245 112 aa0.1□□□□□ -2.39
SRP54-207ENST00000555535 A0A1B0GV50 99 aa0.1□□□□□ -2.39
SRP54-207ENST00000555535 A0A1W2PPM0 123 aa0.1□□□□□ -2.39
SRP54-207ENST00000555535 NUPR2A6NF83 97 aa0.1□□□□□ -2.39
SRP54-207ENST00000555535 LRRN3E7EW58 273 aa0.1□□□□□ -2.39
SRP54-207ENST00000555535 BUB1B-PAK6H3BSN5 160 aa0.1□□□□□ -2.39
SRP54-207ENST00000555535 KCNK1O00180 336 aa0.1□□□□□ -2.39
SRP54-207ENST00000555535 PSMD12O00232 456 aaPredicted RBP0.1□□□□□ -2.39
SRP54-207ENST00000555535 FAAHO00519 579 aa0.1□□□□□ -2.39
SRP54-207ENST00000555535 CCL25O15444 150 aa0.1□□□□□ -2.39
SRP54-207ENST00000555535 HLA-DRB1P01911 266 aa0.1□□□□□ -2.39
SRP54-207ENST00000555535 PRH1P02810 166 aa0.1□□□□□ -2.39
SRP54-207ENST00000555535 TPM3P06753 285 aa0.1□□□□□ -2.39
SRP54-207ENST00000555535 BAALC-AS2P0C853 105 aa0.1□□□□□ -2.39
SRP54-207ENST00000555535 MIFP14174 115 aa0.1□□□□□ -2.39
SRP54-207ENST00000555535 KDELR1P24390 212 aa0.1□□□□□ -2.39
SRP54-207ENST00000555535 S100A4P26447 101 aaKnown RBP0.1□□□□□ -2.39
SRP54-207ENST00000555535 RPL5P46777 297 aaKnown RBP0.1□□□□□ -2.39
SRP54-207ENST00000555535 CDC42P60953 191 aa0.1□□□□□ -2.39
SRP54-207ENST00000555535 RHOBP62745 196 aa0.1□□□□□ -2.39
SRP54-207ENST00000555535 C1orf137Q5JT78 98 aa0.1□□□□□ -2.39
SRP54-207ENST00000555535 BRMS1LQ5PSV4 323 aa0.1□□□□□ -2.39
SRP54-207ENST00000555535 SPOPLQ6IQ16 392 aa0.1□□□□□ -2.39
SRP54-207ENST00000555535 SFXN4Q6P4A7 337 aa0.1□□□□□ -2.39
SRP54-207ENST00000555535 SOSTDC1Q6X4U4 206 aa0.1□□□□□ -2.39
SRP54-207ENST00000555535 DEFB128Q7Z7B8 93 aa0.1□□□□□ -2.39
SRP54-207ENST00000555535 C3orf56Q8N813 242 aa0.1□□□□□ -2.39
SRP54-207ENST00000555535 OR52L1Q8NGH7 329 aa0.1□□□□□ -2.39
SRP54-207ENST00000555535 TMEM70Q9BUB7 260 aa0.1□□□□□ -2.39
SRP54-207ENST00000555535 COMMD5Q9GZQ3 224 aa0.1□□□□□ -2.39
SRP54-207ENST00000555535 PRTFDC1Q9NRG1 225 aa0.1□□□□□ -2.39
SRP54-207ENST00000555535 UBAP1Q9NZ09 502 aa0.1□□□□□ -2.39
SRP54-207ENST00000555535 TMEM14CQ9P0S9 112 aa0.1□□□□□ -2.39
SRP54-207ENST00000555535 UTP11Q9Y3A2 253 aaKnown RBP0.1□□□□□ -2.39
SRP54-207ENST00000555535 LSM5Q9Y4Y9 91 aaKnown RBP0.1□□□□□ -2.39
SRP54-207ENST00000555535 DCCP43146 1447 aa0.1□□□□□ -2.39
SRP54-207ENST00000555535 COL1A1P02452 1464 aaPredicted RBP0.1□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms