RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 CFHR3Q02985 330 aa5.81□□□□□ -1.48
SYNE2-216ENST00000555002 FAM209AQ5JX71 171 aa5.81□□□□□ -1.48
SYNE2-216ENST00000555002 ZNF600Q6ZNG1 722 aa5.81□□□□□ -1.48
SYNE2-216ENST00000555002 PPP1R32Q7Z5V6 425 aa5.81□□□□□ -1.48
SYNE2-216ENST00000555002 ZIC4Q8N9L1 334 aa5.81□□□□□ -1.48
SYNE2-216ENST00000555002 SLC25A28Q96A46 364 aa5.81□□□□□ -1.48
SYNE2-216ENST00000555002 UBE2E2Q96LR5 201 aa5.81□□□□□ -1.48
SYNE2-216ENST00000555002 RCHY1Q96PM5 261 aa5.81□□□□□ -1.48
SYNE2-216ENST00000555002 SNHG12Q9BXW3 62 aa5.81□□□□□ -1.48
SYNE2-216ENST00000555002 CRIM1Q9NZV1 1036 aa5.81□□□□□ -1.48
SYNE2-216ENST00000555002 PTGDSP41222 190 aa5.8□□□□□ -1.48
SYNE2-216ENST00000555002 ZNF345Q14585 488 aa5.8□□□□□ -1.48
SYNE2-216ENST00000555002 TBR1Q16650 682 aa5.8□□□□□ -1.48
SYNE2-216ENST00000555002 TRAV40A0A0B4J280 105 aa5.8□□□□□ -1.48
SYNE2-216ENST00000555002 CELA3BP08861 270 aa5.8□□□□□ -1.48
SYNE2-216ENST00000555002 CECR9P0C854 216 aa5.8□□□□□ -1.48
SYNE2-216ENST00000555002 PCP4P48539 62 aa5.8□□□□□ -1.48
SYNE2-216ENST00000555002 FAM27E3Q08E93 113 aa5.8□□□□□ -1.48
SYNE2-216ENST00000555002 CD300EQ496F6 205 aaPredicted RBP5.8□□□□□ -1.48
SYNE2-216ENST00000555002 GDF15Q99988 308 aa5.8□□□□□ -1.48
SYNE2-216ENST00000555002 TRAV8-1A0A0A6YYK1 113 aa5.8□□□□□ -1.48
SYNE2-216ENST00000555002 DPM2O94777 84 aa5.8□□□□□ -1.48
SYNE2-216ENST00000555002 PRR31Q5SQ13 230 aa5.8□□□□□ -1.48
SYNE2-216ENST00000555002 NEU4Q8WWR8 484 aaPredicted RBP5.8□□□□□ -1.48
SYNE2-216ENST00000555002 SMIM8Q96KF7 97 aa5.8□□□□□ -1.48
SYNE2-216ENST00000555002 CA7P43166 264 aa5.8□□□□□ -1.48
SYNE2-216ENST00000555002 OR52E5Q8NH55 327 aa5.8□□□□□ -1.48
SYNE2-216ENST00000555002 ASCL2Q99929 193 aa5.8□□□□□ -1.48
SYNE2-216ENST00000555002 LHFPL6Q9Y693 200 aa5.8□□□□□ -1.48
SYNE2-216ENST00000555002 hADV29S1A0JD25 119 aa5.8□□□□□ -1.48
SYNE2-216ENST00000555002 TCRAP04437 139 aa5.8□□□□□ -1.48
SYNE2-216ENST00000555002 CXCL2P19875 107 aa5.8□□□□□ -1.48
SYNE2-216ENST00000555002 GLRXP35754 106 aa5.8□□□□□ -1.48
SYNE2-216ENST00000555002 NIT1Q86X76 327 aa5.8□□□□□ -1.48
SYNE2-216ENST00000555002 ABCA2Q9BZC7 2435 aa5.8□□□□□ -1.48
SYNE2-216ENST00000555002 C19orf67A6NJJ6 358 aa5.8□□□□□ -1.48
SYNE2-216ENST00000555002 NKAPP1Q8N9T2 125 aa5.8□□□□□ -1.48
SYNE2-216ENST00000555002 C19orf24Q9BVV8 132 aa5.8□□□□□ -1.48
SYNE2-216ENST00000555002 NCOA6Q14686 2063 aaPredicted RBP5.8□□□□□ -1.48
SYNE2-216ENST00000555002 NOTCH2Q04721 2471 aa5.8□□□□□ -1.48
SYNE2-216ENST00000555002 DUSP14O95147 198 aaKnown RBP5.8□□□□□ -1.48
SYNE2-216ENST00000555002 RND3P61587 244 aa5.8□□□□□ -1.48
SYNE2-216ENST00000555002 CIARTQ8N365 385 aaPredicted RBP5.8□□□□□ -1.48
SYNE2-216ENST00000555002 LYNX1G3V0Z9 82 aa5.8□□□□□ -1.48
SYNE2-216ENST00000555002 LYNX1P0DP58 116 aa5.8□□□□□ -1.48
SYNE2-216ENST00000555002 GGTLC1Q9BX51 225 aa5.8□□□□□ -1.48
SYNE2-216ENST00000555002 BDP1A6H8Y1 2624 aa5.8□□□□□ -1.48
SYNE2-216ENST00000555002 WNK3Q9BYP7 1800 aa5.8□□□□□ -1.48
SYNE2-216ENST00000555002 HIGD1CA8MV81 97 aa5.8□□□□□ -1.48
SYNE2-216ENST00000555002 F5H768 121 aa5.8□□□□□ -1.48
SYNE2-216ENST00000555002 LEPROTO15243 131 aa5.8□□□□□ -1.48
SYNE2-216ENST00000555002 NBR2O15453 112 aa5.8□□□□□ -1.48
SYNE2-216ENST00000555002 C1QAP02745 245 aa5.8□□□□□ -1.48
SYNE2-216ENST00000555002 DEFB130BP0DP73 79 aa5.8□□□□□ -1.48
SYNE2-216ENST00000555002 DEFB130AP0DP74 79 aa5.8□□□□□ -1.48
SYNE2-216ENST00000555002 Q71RC1 249 aaPredicted RBP5.8□□□□□ -1.48
SYNE2-216ENST00000555002 C1orf159Q96HA4 380 aa5.8□□□□□ -1.48
SYNE2-216ENST00000555002 TNRC6CQ9HCJ0 1690 aaKnown RBP5.8□□□□□ -1.48
SYNE2-216ENST00000555002 CELA3AP09093 270 aa5.79□□□□□ -1.48
SYNE2-216ENST00000555002 GAGE2AQ6NT46 116 aa5.79□□□□□ -1.48
SYNE2-216ENST00000555002 MIR17HGQ75NE6 70 aa5.79□□□□□ -1.48
SYNE2-216ENST00000555002 OR5P3Q8WZ94 311 aa5.79□□□□□ -1.48
SYNE2-216ENST00000555002 SLC50A1Q9BRV3 221 aa5.79□□□□□ -1.48
SYNE2-216ENST00000555002 KLF12Q9Y4X4 402 aa5.79□□□□□ -1.48
SYNE2-216ENST00000555002 TNFRSF6BO95407 300 aa5.79□□□□□ -1.48
SYNE2-216ENST00000555002 COQ2Q96H96 371 aa5.79□□□□□ -1.48
SYNE2-216ENST00000555002 FOXD3Q9UJU5 478 aaPredicted RBP5.79□□□□□ -1.48
SYNE2-216ENST00000555002 A0A1W2PPC1 479 aa5.79□□□□□ -1.48
SYNE2-216ENST00000555002 C22orf46C9J442 243 aa5.79□□□□□ -1.48
SYNE2-216ENST00000555002 UMODP07911 640 aa5.79□□□□□ -1.48
SYNE2-216ENST00000555002 IMMP1LQ96LU5 166 aa5.79□□□□□ -1.48
SYNE2-216ENST00000555002 OTORQ9NRC9 128 aa5.79□□□□□ -1.48
SYNE2-216ENST00000555002 FOXS1O43638 330 aa5.79□□□□□ -1.48
SYNE2-216ENST00000555002 RPL34P49207 117 aaKnown RBP5.79□□□□□ -1.48
SYNE2-216ENST00000555002 RPL15P61313 204 aaKnown RBP5.79□□□□□ -1.48
SYNE2-216ENST00000555002 HIST1H2BAQ96A08 127 aa5.79□□□□□ -1.48
SYNE2-216ENST00000555002 C2orf16Q68DN1 1984 aa5.79□□□□□ -1.48
SYNE2-216ENST00000555002 A0A0G2JMM0 328 aa5.79□□□□□ -1.48
SYNE2-216ENST00000555002 A0A1W2PPB8 328 aa5.79□□□□□ -1.48
SYNE2-216ENST00000555002 A0A1W2PRS3 328 aa5.79□□□□□ -1.48
SYNE2-216ENST00000555002 KIR3DP1A8MWS1 328 aa5.79□□□□□ -1.48
SYNE2-216ENST00000555002 SIGLEC15Q6ZMC9 328 aa5.79□□□□□ -1.48
SYNE2-216ENST00000555002 KLHL30-AS1Q8NEE0 82 aa5.79□□□□□ -1.48
SYNE2-216ENST00000555002 ZNF501Q96CX3 271 aaPredicted RBP5.79□□□□□ -1.48
SYNE2-216ENST00000555002 MIXL1Q9H2W2 232 aa5.79□□□□□ -1.48
SYNE2-216ENST00000555002 LILRA6Q6PI73 481 aa5.79□□□□□ -1.48
SYNE2-216ENST00000555002 V9GYH0 126 aa5.79□□□□□ -1.48
SYNE2-216ENST00000555002 H3BMM0 161 aa5.79□□□□□ -1.48
SYNE2-216ENST00000555002 UBE2WQ96B02 151 aa5.79□□□□□ -1.48
SYNE2-216ENST00000555002 PRTN3P24158 256 aa5.79□□□□□ -1.48
SYNE2-216ENST00000555002 TMEM30BQ3MIR4 351 aa5.79□□□□□ -1.48
SYNE2-216ENST00000555002 FAM90A26D6RGX4 464 aa5.78□□□□□ -1.48
SYNE2-216ENST00000555002 C2orf68Q2NKX9 166 aa5.78□□□□□ -1.48
SYNE2-216ENST00000555002 RCC1LQ96I51 464 aaKnown RBP5.78□□□□□ -1.48
SYNE2-216ENST00000555002 C17orf98A8MV24 154 aa5.78□□□□□ -1.48
SYNE2-216ENST00000555002 NCR2O95944 276 aa5.78□□□□□ -1.48
SYNE2-216ENST00000555002 WNT2P09544 360 aa5.78□□□□□ -1.48
SYNE2-216ENST00000555002 CCL1P22362 96 aa5.78□□□□□ -1.48
SYNE2-216ENST00000555002 GPX4P36969 197 aaPredicted RBP5.78□□□□□ -1.48
SYNE2-216ENST00000555002 FOXL1Q12952 345 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms