RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 ABHD12Q8N2K0 398 aa13.65□□□□□ -0.22
PCNX1-209ENST00000554879 C20orf144Q9BQM9 153 aa13.65□□□□□ -0.22
PCNX1-209ENST00000554879 MBNL3Q9NUK0 354 aaKnown RBP13.65□□□□□ -0.22
PCNX1-209ENST00000554879 ZNRD1Q9P1U0 126 aa13.65□□□□□ -0.22
PCNX1-209ENST00000554879 HILPDAQ9Y5L2 63 aa13.65□□□□□ -0.22
PCNX1-209ENST00000554879 INSIG2Q9Y5U4 225 aa13.65□□□□□ -0.22
PCNX1-209ENST00000554879 CSPG4Q6UVK1 2322 aa13.65□□□□□ -0.22
PCNX1-209ENST00000554879 CLEC3BP05452 202 aa13.65□□□□□ -0.22
PCNX1-209ENST00000554879 OR51G1Q8NGK1 321 aa13.65□□□□□ -0.22
PCNX1-209ENST00000554879 ZDHHC16Q969W1 377 aa13.65□□□□□ -0.22
PCNX1-209ENST00000554879 SRSF7Q16629 238 aaKnown RBP eCLIP13.65□□□□□ -0.22
PCNX1-209ENST00000554879 FLYWCH2Q96CP2 140 aaKnown RBP13.65□□□□□ -0.22
PCNX1-209ENST00000554879 GAFA1Q96PS6 74 aa13.65□□□□□ -0.22
PCNX1-209ENST00000554879 COL8A2P25067 703 aa13.65□□□□□ -0.22
PCNX1-209ENST00000554879 ZNF672Q499Z4 452 aaPredicted RBP13.65□□□□□ -0.22
PCNX1-209ENST00000554879 Q6ZPA2 131 aa13.65□□□□□ -0.22
PCNX1-209ENST00000554879 Q6ZS49 121 aa13.65□□□□□ -0.22
PCNX1-209ENST00000554879 OR10G4Q8NGN3 311 aa13.64□□□□□ -0.23
PCNX1-209ENST00000554879 OR10G9Q8NGN4 311 aa13.64□□□□□ -0.23
PCNX1-209ENST00000554879 OR10G7Q8NGN6 311 aa13.64□□□□□ -0.23
PCNX1-209ENST00000554879 TMEM140Q9NV12 185 aa13.64□□□□□ -0.23
PCNX1-209ENST00000554879 NUPR1O60356 82 aa13.64□□□□□ -0.23
PCNX1-209ENST00000554879 LMO1P25800 156 aa13.64□□□□□ -0.23
PCNX1-209ENST00000554879 Q6ZWC4 215 aa13.64□□□□□ -0.23
PCNX1-209ENST00000554879 DMXL2Q8TDJ6 3036 aa13.64□□□□□ -0.23
PCNX1-209ENST00000554879 KIR2DL5BA0A0G2JN68 375 aa13.64□□□□□ -0.23
PCNX1-209ENST00000554879 KIR2DL5BA0A0G2JPC4 375 aa13.64□□□□□ -0.23
PCNX1-209ENST00000554879 A0A0G2JRQ6 117 aa13.64□□□□□ -0.23
PCNX1-209ENST00000554879 KBTBD11O94819 623 aa13.64□□□□□ -0.23
PCNX1-209ENST00000554879 KIR2DL5AQ8N109 375 aa13.64□□□□□ -0.23
PCNX1-209ENST00000554879 SAA2-SAA4A0A096LPE2 208 aa13.63□□□□□ -0.23
PCNX1-209ENST00000554879 C17orf112F2Z3M2 114 aa13.63□□□□□ -0.23
PCNX1-209ENST00000554879 K7EQM0 130 aa13.63□□□□□ -0.23
PCNX1-209ENST00000554879 PITX3O75364 302 aa13.63□□□□□ -0.23
PCNX1-209ENST00000554879 SAA2P0DJI9 122 aaPredicted RBP13.63□□□□□ -0.23
PCNX1-209ENST00000554879 DEFA4P12838 97 aa13.63□□□□□ -0.23
PCNX1-209ENST00000554879 KIR2DS2P43631 304 aa13.63□□□□□ -0.23
PCNX1-209ENST00000554879 CAMPP49913 170 aa13.63□□□□□ -0.23
PCNX1-209ENST00000554879 ISLRO14498 428 aa13.63□□□□□ -0.23
PCNX1-209ENST00000554879 HYPMO75409 117 aa13.63□□□□□ -0.23
PCNX1-209ENST00000554879 VMA21Q3ZAQ7 101 aa13.63□□□□□ -0.23
PCNX1-209ENST00000554879 SRP14P37108 136 aaKnown RBP13.63□□□□□ -0.23
PCNX1-209ENST00000554879 ERHP84090 104 aaKnown RBP13.63□□□□□ -0.23
PCNX1-209ENST00000554879 WDR73Q6P4I2 378 aa13.63□□□□□ -0.23
PCNX1-209ENST00000554879 NCBP2LA6PVI3 153 aaKnown RBP13.63□□□□□ -0.23
PCNX1-209ENST00000554879 SLC17A3O00476 420 aa13.63□□□□□ -0.23
PCNX1-209ENST00000554879 TSPOP30536 169 aa13.63□□□□□ -0.23
PCNX1-209ENST00000554879 DLX1P56177 255 aa13.63□□□□□ -0.23
PCNX1-209ENST00000554879 SPSB3Q6PJ21 355 aa13.63□□□□□ -0.23
PCNX1-209ENST00000554879 ZNF788Q6ZQV5 615 aa13.63□□□□□ -0.23
PCNX1-209ENST00000554879 HES4Q9HCC6 221 aa13.63□□□□□ -0.23
PCNX1-209ENST00000554879 LINC00312Q9Y6C7 94 aa13.63□□□□□ -0.23
PCNX1-209ENST00000554879 CKS1BP61024 79 aa13.62□□□□□ -0.23
PCNX1-209ENST00000554879 SVIPQ8NHG7 77 aa13.62□□□□□ -0.23
PCNX1-209ENST00000554879 LSM10Q969L4 123 aaKnown RBP13.62□□□□□ -0.23
PCNX1-209ENST00000554879 QTRT1Q9BXR0 403 aaKnown RBP13.62□□□□□ -0.23
PCNX1-209ENST00000554879 CHODLQ9H9P2 273 aa13.62□□□□□ -0.23
PCNX1-209ENST00000554879 LRRK2Q5S007 2527 aa13.62□□□□□ -0.23
PCNX1-209ENST00000554879 LINC00473A8K010 186 aa13.62□□□□□ -0.23
PCNX1-209ENST00000554879 YPEL1O60688 119 aa13.62□□□□□ -0.23
PCNX1-209ENST00000554879 SRIP30626 198 aa13.62□□□□□ -0.23
PCNX1-209ENST00000554879 OR4D5Q8NGN0 318 aa13.62□□□□□ -0.23
PCNX1-209ENST00000554879 YPEL2Q96QA6 119 aa13.62□□□□□ -0.23
PCNX1-209ENST00000554879 VSIRQ9H7M9 311 aa13.62□□□□□ -0.23
PCNX1-209ENST00000554879 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.61□□□□□ -0.23
PCNX1-209ENST00000554879 STAG3L3P0CL85 134 aa13.61□□□□□ -0.23
PCNX1-209ENST00000554879 FCER1GP30273 86 aa13.61□□□□□ -0.23
PCNX1-209ENST00000554879 C3orf36Q3SXR2 165 aa13.61□□□□□ -0.23
PCNX1-209ENST00000554879 CYP2G1PQ6ZSU1 146 aa13.61□□□□□ -0.23
PCNX1-209ENST00000554879 LRTM2Q8N967 370 aa13.61□□□□□ -0.23
PCNX1-209ENST00000554879 CCDC168Q8NDH2 2452 aa13.61□□□□□ -0.23
PCNX1-209ENST00000554879 SHISA9B4DS77 424 aa13.61□□□□□ -0.23
PCNX1-209ENST00000554879 J3QR06 171 aa13.61□□□□□ -0.23
PCNX1-209ENST00000554879 SLC25A6P12236 298 aa13.61□□□□□ -0.23
PCNX1-209ENST00000554879 ADORA2A-AS1P86434 159 aa13.61□□□□□ -0.23
PCNX1-209ENST00000554879 PNKDQ8N490 385 aa13.61□□□□□ -0.23
PCNX1-209ENST00000554879 OR2T6Q8NHC8 308 aa13.61□□□□□ -0.23
PCNX1-209ENST00000554879 ZNF355PQ9NSJ1 428 aa13.61□□□□□ -0.23
PCNX1-209ENST00000554879 IGKV1-5P01602 117 aa13.61□□□□□ -0.23
PCNX1-209ENST00000554879 TNXAQ16473 311 aa13.61□□□□□ -0.23
PCNX1-209ENST00000554879 Q6ZRM9 215 aa13.61□□□□□ -0.23
PCNX1-209ENST00000554879 STPG3Q8N7X2 389 aa13.61□□□□□ -0.23
PCNX1-209ENST00000554879 DUTP33316 252 aaKnown RBP13.61□□□□□ -0.23
PCNX1-209ENST00000554879 FAM90A2PQ658T7 463 aa13.61□□□□□ -0.23
PCNX1-209ENST00000554879 GATAD1Q8WUU5 269 aa13.61□□□□□ -0.23
PCNX1-209ENST00000554879 CT45A1Q5HYN5 189 aa13.6□□□□□ -0.23
PCNX1-209ENST00000554879 CFAP161Q6P656 301 aa13.6□□□□□ -0.23
PCNX1-209ENST00000554879 CT45A3Q8NHU0 189 aa13.6□□□□□ -0.23
PCNX1-209ENST00000554879 SIGMAR1Q99720 223 aa13.6□□□□□ -0.23
PCNX1-209ENST00000554879 PEF1Q9UBV8 284 aaKnown RBP13.6□□□□□ -0.23
PCNX1-209ENST00000554879 C22orf46C9J442 243 aa13.6□□□□□ -0.23
PCNX1-209ENST00000554879 H3BUT2 72 aa13.6□□□□□ -0.23
PCNX1-209ENST00000554879 TMEM200BQ69YZ2 307 aa13.6□□□□□ -0.23
PCNX1-209ENST00000554879 C12orf54Q6X4T0 127 aa13.6□□□□□ -0.23
PCNX1-209ENST00000554879 SSUH2Q9Y2M2 353 aa13.6□□□□□ -0.23
PCNX1-209ENST00000554879 OR51B2Q9Y5P1 312 aa13.6□□□□□ -0.23
PCNX1-209ENST00000554879 WDFY3Q8IZQ1 3526 aa13.6□□□□□ -0.23
PCNX1-209ENST00000554879 SLC25A17O43808 307 aa13.6□□□□□ -0.23
PCNX1-209ENST00000554879 SSMEM1Q8WWF3 244 aa13.6□□□□□ -0.23
PCNX1-209ENST00000554879 MRPL20Q9BYC9 149 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms