RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 CISD3P0C7P0 127 aa3.59□□□□□ -1.83
ATXN3-227ENST00000554491 LINC00694P0DN24 101 aa3.59□□□□□ -1.83
ATXN3-227ENST00000554491 IRF1P10914 325 aa3.59□□□□□ -1.83
ATXN3-227ENST00000554491 FABP2P12104 132 aa3.59□□□□□ -1.83
ATXN3-227ENST00000554491 CNTFRP26992 372 aa3.59□□□□□ -1.83
ATXN3-227ENST00000554491 S100A3P33764 101 aa3.59□□□□□ -1.83
ATXN3-227ENST00000554491 NKX2-1P43699 371 aaPredicted RBP3.59□□□□□ -1.83
ATXN3-227ENST00000554491 SGSHP51688 502 aa3.59□□□□□ -1.83
ATXN3-227ENST00000554491 RPS14P62263 151 aaKnown RBP3.59□□□□□ -1.83
ATXN3-227ENST00000554491 FMODQ06828 376 aa3.59□□□□□ -1.83
ATXN3-227ENST00000554491 GAGE2BQ13066 116 aa3.59□□□□□ -1.83
ATXN3-227ENST00000554491 PPP1R1AQ13522 171 aa3.59□□□□□ -1.83
ATXN3-227ENST00000554491 OR7A5Q15622 319 aa3.59□□□□□ -1.83
ATXN3-227ENST00000554491 C4orf26Q17RF5 130 aa3.59□□□□□ -1.83
ATXN3-227ENST00000554491 HLA-DRB5Q30154 266 aa3.59□□□□□ -1.83
ATXN3-227ENST00000554491 LINC01620Q4KN68 170 aa3.59□□□□□ -1.83
ATXN3-227ENST00000554491 GAGE2EQ4V326 116 aa3.59□□□□□ -1.83
ATXN3-227ENST00000554491 MPV17L2Q567V2 206 aa3.59□□□□□ -1.83
ATXN3-227ENST00000554491 ZNF506Q5JVG8 444 aa3.59□□□□□ -1.83
ATXN3-227ENST00000554491 C1orf195Q5TG92 126 aa3.59□□□□□ -1.83
ATXN3-227ENST00000554491 TSPO2Q5TGU0 170 aa3.59□□□□□ -1.83
ATXN3-227ENST00000554491 GUSBP11Q6P575 273 aa3.59□□□□□ -1.83
ATXN3-227ENST00000554491 SPSB3Q6PJ21 355 aa3.59□□□□□ -1.83
ATXN3-227ENST00000554491 STAC2Q6ZMT1 411 aa3.59□□□□□ -1.83
ATXN3-227ENST00000554491 SHISA6Q6ZSJ9 500 aa3.59□□□□□ -1.83
ATXN3-227ENST00000554491 RPS27LQ71UM5 84 aaKnown RBP3.59□□□□□ -1.83
ATXN3-227ENST00000554491 OOSP2Q86WS3 158 aa3.59□□□□□ -1.83
ATXN3-227ENST00000554491 ZNF695Q8IW36 515 aa3.59□□□□□ -1.83
ATXN3-227ENST00000554491 PRR22Q8IZ63 422 aa3.59□□□□□ -1.83
ATXN3-227ENST00000554491 SLC25A45Q8N413 288 aa3.59□□□□□ -1.83
ATXN3-227ENST00000554491 TMEM86BQ8N661 226 aa3.59□□□□□ -1.83
ATXN3-227ENST00000554491 GCSAMQ8N6F7 178 aa3.59□□□□□ -1.83
ATXN3-227ENST00000554491 SIGLECL1Q8N7X8 197 aa3.59□□□□□ -1.83
ATXN3-227ENST00000554491 DCAF4L2Q8NA75 395 aa3.59□□□□□ -1.83
ATXN3-227ENST00000554491 GATD1Q8NB37 220 aa3.59□□□□□ -1.83
ATXN3-227ENST00000554491 ZNF740Q8NDX6 193 aa3.59□□□□□ -1.83
ATXN3-227ENST00000554491 PLPPR1Q8TBJ4 325 aa3.59□□□□□ -1.83
ATXN3-227ENST00000554491 ZNF502Q8TBZ5 544 aa3.59□□□□□ -1.83
ATXN3-227ENST00000554491 C18orf32Q8TCD1 76 aa3.59□□□□□ -1.83
ATXN3-227ENST00000554491 RDH5Q92781 318 aa3.59□□□□□ -1.83
ATXN3-227ENST00000554491 MAL2Q969L2 176 aa3.59□□□□□ -1.83
ATXN3-227ENST00000554491 GNPNAT1Q96EK6 184 aaPredicted RBP3.59□□□□□ -1.83
ATXN3-227ENST00000554491 PELI1Q96FA3 418 aa3.59□□□□□ -1.83
ATXN3-227ENST00000554491 GMPPAQ96IJ6 420 aaPredicted RBP3.59□□□□□ -1.83
ATXN3-227ENST00000554491 ZNF488Q96MN9 340 aa3.59□□□□□ -1.83
ATXN3-227ENST00000554491 MS4A6AQ9H2W1 248 aa3.59□□□□□ -1.83
ATXN3-227ENST00000554491 ACER3Q9NUN7 267 aa3.59□□□□□ -1.83
ATXN3-227ENST00000554491 SLC25A37Q9NYZ2 338 aa3.59□□□□□ -1.83
ATXN3-227ENST00000554491 ZNF581Q9P0T4 197 aa3.59□□□□□ -1.83
ATXN3-227ENST00000554491 GAGE2DQ9UEU5 116 aa3.59□□□□□ -1.83
ATXN3-227ENST00000554491 RABAC1Q9UI14 185 aa3.59□□□□□ -1.83
ATXN3-227ENST00000554491 LAMP3Q9UQV4 416 aa3.59□□□□□ -1.83
ATXN3-227ENST00000554491 ZNF257Q9Y2Q1 563 aa3.59□□□□□ -1.83
ATXN3-227ENST00000554491 HEBP2Q9Y5Z4 205 aa3.59□□□□□ -1.83
ATXN3-227ENST00000554491 NBEAL1Q6ZS30 2694 aa3.59□□□□□ -1.83
ATXN3-227ENST00000554491 JMJD1CQ15652 2540 aa3.59□□□□□ -1.84
ATXN3-227ENST00000554491 UNC13CQ8NB66 2214 aa3.58□□□□□ -1.84
ATXN3-227ENST00000554491 IGLV3-16A0A075B6K0 115 aa3.58□□□□□ -1.84
ATXN3-227ENST00000554491 A0A087WYN8 130 aa3.58□□□□□ -1.84
ATXN3-227ENST00000554491 TRAV1-2A0A0B4J238 106 aa3.58□□□□□ -1.84
ATXN3-227ENST00000554491 TRAV24A0A0B4J272 114 aa3.58□□□□□ -1.84
ATXN3-227ENST00000554491 MUC21A0A0G2JKD1 596 aa3.58□□□□□ -1.84
ATXN3-227ENST00000554491 MUC21A0A140T8X8 626 aa3.58□□□□□ -1.84
ATXN3-227ENST00000554491 A0A1W2PPM0 123 aa3.58□□□□□ -1.84
ATXN3-227ENST00000554491 SLC2A10O95528 541 aa3.58□□□□□ -1.84
ATXN3-227ENST00000554491 CA1P00915 261 aaPredicted RBP3.58□□□□□ -1.84
ATXN3-227ENST00000554491 MT-ATP8P03928 68 aa3.58□□□□□ -1.84
ATXN3-227ENST00000554491 OR9G9P0C7N8 305 aa3.58□□□□□ -1.84
ATXN3-227ENST00000554491 PTHLHP12272 177 aa3.58□□□□□ -1.84
ATXN3-227ENST00000554491 ACP5P13686 325 aa3.58□□□□□ -1.84
ATXN3-227ENST00000554491 KIR2DS2P43631 304 aa3.58□□□□□ -1.84
ATXN3-227ENST00000554491 PGFP49763 221 aa3.58□□□□□ -1.84
ATXN3-227ENST00000554491 OR1D5P58170 312 aa3.58□□□□□ -1.84
ATXN3-227ENST00000554491 MTPNP58546 118 aa3.58□□□□□ -1.84
ATXN3-227ENST00000554491 GNB2P62879 340 aa3.58□□□□□ -1.84
ATXN3-227ENST00000554491 RPL31P62899 125 aaKnown RBP3.58□□□□□ -1.84
ATXN3-227ENST00000554491 RPL38P63173 70 aaKnown RBP3.58□□□□□ -1.84
ATXN3-227ENST00000554491 ZNF74Q16587 644 aa3.58□□□□□ -1.84
ATXN3-227ENST00000554491 SLC25A35Q3KQZ1 300 aa3.58□□□□□ -1.84
ATXN3-227ENST00000554491 FAM174BQ3ZCQ3 159 aa3.58□□□□□ -1.84
ATXN3-227ENST00000554491 MUC21Q5SSG8 566 aa3.58□□□□□ -1.84
ATXN3-227ENST00000554491 PIANPQ8IYJ0 282 aa3.58□□□□□ -1.84
ATXN3-227ENST00000554491 C10orf111Q8N326 155 aa3.58□□□□□ -1.84
ATXN3-227ENST00000554491 ZNF615Q8N8J6 731 aa3.58□□□□□ -1.84
ATXN3-227ENST00000554491 MDS2Q8NDY4 140 aa3.58□□□□□ -1.84
ATXN3-227ENST00000554491 OR10G2Q8NGC3 310 aa3.58□□□□□ -1.84
ATXN3-227ENST00000554491 OR5H2Q8NGV7 314 aa3.58□□□□□ -1.84
ATXN3-227ENST00000554491 OR2T10Q8NGZ9 312 aa3.58□□□□□ -1.84
ATXN3-227ENST00000554491 OR1L1Q8NH94 360 aa3.58□□□□□ -1.84
ATXN3-227ENST00000554491 OR1F12Q8NHA8 337 aa3.58□□□□□ -1.84
ATXN3-227ENST00000554491 C8orf46Q8TAG6 207 aa3.58□□□□□ -1.84
ATXN3-227ENST00000554491 NUS1Q96E22 293 aa3.58□□□□□ -1.84
ATXN3-227ENST00000554491 RBMXL1Q96E39 390 aaKnown RBP3.58□□□□□ -1.84
ATXN3-227ENST00000554491 SEC22AQ96IW7 307 aa3.58□□□□□ -1.84
ATXN3-227ENST00000554491 LINC01587Q99440 93 aa3.58□□□□□ -1.84
ATXN3-227ENST00000554491 NAA38Q9BRA0 125 aaKnown RBP3.58□□□□□ -1.84
ATXN3-227ENST00000554491 RNF126Q9BV68 326 aa3.58□□□□□ -1.84
ATXN3-227ENST00000554491 SLC25A39Q9BZJ4 359 aaPredicted RBP3.58□□□□□ -1.84
ATXN3-227ENST00000554491 COMMD5Q9GZQ3 224 aa3.58□□□□□ -1.84
ATXN3-227ENST00000554491 MANBALQ9NQG1 85 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms