RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 LPAR6P43657 344 aa10.01□□□□□ -0.81
SHMT2-211ENST00000554310 EIF5AP63241 154 aaKnown RBP10.01□□□□□ -0.81
SHMT2-211ENST00000554310 KLF5Q13887 457 aaPredicted RBP10.01□□□□□ -0.81
SHMT2-211ENST00000554310 RPEL1Q2QD12 228 aa10.01□□□□□ -0.81
SHMT2-211ENST00000554310 KLK9Q2XQG4 91 aa10.01□□□□□ -0.81
SHMT2-211ENST00000554310 C15orf32Q32M92 178 aa10.01□□□□□ -0.81
SHMT2-211ENST00000554310 ZNF585BQ52M93 769 aa10.01□□□□□ -0.81
SHMT2-211ENST00000554310 CTRB2Q6GPI1 263 aa10.01□□□□□ -0.81
SHMT2-211ENST00000554310 COMMD7Q86VX2 200 aa10.01□□□□□ -0.81
SHMT2-211ENST00000554310 RBPMSQ93062 196 aaKnown RBP10.01□□□□□ -0.81
SHMT2-211ENST00000554310 CITED4Q96RK1 184 aa10.01□□□□□ -0.81
SHMT2-211ENST00000554310 PRR25Q96S07 402 aa10.01□□□□□ -0.81
SHMT2-211ENST00000554310 QTRT1Q9BXR0 403 aaKnown RBP10.01□□□□□ -0.81
SHMT2-211ENST00000554310 KLK9Q9UKQ9 250 aa10.01□□□□□ -0.81
SHMT2-211ENST00000554310 LSM5Q9Y4Y9 91 aaKnown RBP10.01□□□□□ -0.81
SHMT2-211ENST00000554310 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10□□□□□ -0.81
SHMT2-211ENST00000554310 IGLC7A0M8Q6 106 aa10□□□□□ -0.81
SHMT2-211ENST00000554310 LY86O95711 162 aa10□□□□□ -0.81
SHMT2-211ENST00000554310 KRASP01116 189 aa10□□□□□ -0.81
SHMT2-211ENST00000554310 SLC25A6P12236 298 aa10□□□□□ -0.81
SHMT2-211ENST00000554310 RPL12P30050 165 aaKnown RBP10□□□□□ -0.81
SHMT2-211ENST00000554310 NMSQ5H8A3 153 aa10□□□□□ -0.81
SHMT2-211ENST00000554310 C19orf35Q6ZS72 473 aa10□□□□□ -0.81
SHMT2-211ENST00000554310 HSD17B13Q7Z5P4 300 aaPredicted RBP10□□□□□ -0.81
SHMT2-211ENST00000554310 OR9G4Q8NGQ1 327 aa10□□□□□ -0.81
SHMT2-211ENST00000554310 LRRC20Q8TCA0 184 aa10□□□□□ -0.81
SHMT2-211ENST00000554310 FANCD2OSQ96PS1 177 aa10□□□□□ -0.81
SHMT2-211ENST00000554310 B9D2Q9BPU9 175 aa10□□□□□ -0.81
SHMT2-211ENST00000554310 FBXL7Q9UJT9 491 aa10□□□□□ -0.81
SHMT2-211ENST00000554310 IGLV11-55A0A075B6I3 123 aa9.99□□□□□ -0.81
SHMT2-211ENST00000554310 BMPR1BO00238 502 aa9.99□□□□□ -0.81
SHMT2-211ENST00000554310 SCGB1D2O95969 90 aa9.99□□□□□ -0.81
SHMT2-211ENST00000554310 DEFA4P12838 97 aa9.99□□□□□ -0.81
SHMT2-211ENST00000554310 G6PCP35575 357 aa9.99□□□□□ -0.81
SHMT2-211ENST00000554310 P2RY1P47900 373 aa9.99□□□□□ -0.81
SHMT2-211ENST00000554310 SYNJ2BPP57105 145 aa9.99□□□□□ -0.81
SHMT2-211ENST00000554310 BAP18Q8IXM2 172 aa9.99□□□□□ -0.81
SHMT2-211ENST00000554310 OR1L8Q8NGR8 309 aa9.99□□□□□ -0.81
SHMT2-211ENST00000554310 PCNPQ8WW12 178 aaKnown RBP9.99□□□□□ -0.81
SHMT2-211ENST00000554310 LSM10Q969L4 123 aaKnown RBP9.99□□□□□ -0.81
SHMT2-211ENST00000554310 PFDN2Q9UHV9 154 aa9.99□□□□□ -0.81
SHMT2-211ENST00000554310 PRNDQ9UKY0 176 aa9.99□□□□□ -0.81
SHMT2-211ENST00000554310 LSM4Q9Y4Z0 139 aaKnown RBP9.99□□□□□ -0.81
SHMT2-211ENST00000554310 STAB2Q8WWQ8 2551 aa9.99□□□□□ -0.81
SHMT2-211ENST00000554310 COL7A1Q02388 2944 aa9.99□□□□□ -0.81
SHMT2-211ENST00000554310 C15orf61A6NNL5 157 aa9.98□□□□□ -0.81
SHMT2-211ENST00000554310 CYB5BO43169 146 aa9.98□□□□□ -0.81
SHMT2-211ENST00000554310 IGLV1-51P01701 117 aa9.98□□□□□ -0.81
SHMT2-211ENST00000554310 REG1AP05451 166 aa9.98□□□□□ -0.81
SHMT2-211ENST00000554310 CD69Q07108 199 aa9.98□□□□□ -0.81
SHMT2-211ENST00000554310 OR5B3Q8NH48 314 aa9.98□□□□□ -0.81
SHMT2-211ENST00000554310 EEF1AKMT3Q96AZ1 226 aa9.98□□□□□ -0.81
SHMT2-211ENST00000554310 CXorf58Q96LI9 332 aa9.98□□□□□ -0.81
SHMT2-211ENST00000554310 C11orf1Q9H5F2 150 aa9.98□□□□□ -0.81
SHMT2-211ENST00000554310 ZC4H2Q9NQZ6 224 aa9.98□□□□□ -0.81
SHMT2-211ENST00000554310 FKBP11Q9NYL4 201 aa9.98□□□□□ -0.81
SHMT2-211ENST00000554310 PEMTQ9UBM1 199 aa9.98□□□□□ -0.81
SHMT2-211ENST00000554310 RCL1Q9Y2P8 373 aaKnown RBP9.98□□□□□ -0.81
SHMT2-211ENST00000554310 TEX50A0A1B0GTY4 177 aa9.97□□□□□ -0.81
SHMT2-211ENST00000554310 A0A1B0GU03 582 aa9.97□□□□□ -0.81
SHMT2-211ENST00000554310 NDUFB8O95169 186 aa9.97□□□□□ -0.81
SHMT2-211ENST00000554310 SERPINE2P07093 398 aa9.97□□□□□ -0.81
SHMT2-211ENST00000554310 GP9P14770 177 aa9.97□□□□□ -0.81
SHMT2-211ENST00000554310 PVALBP20472 110 aaPredicted RBP9.97□□□□□ -0.81
SHMT2-211ENST00000554310 NKX2-1P43699 371 aaPredicted RBP9.97□□□□□ -0.81
SHMT2-211ENST00000554310 ID3Q02535 119 aa9.97□□□□□ -0.81
SHMT2-211ENST00000554310 CCDC140Q96MF4 163 aa9.97□□□□□ -0.81
SHMT2-211ENST00000554310 NDUFA4L2Q9NRX3 87 aa9.97□□□□□ -0.81
SHMT2-211ENST00000554310 TMEM14BQ9NUH8 114 aa9.97□□□□□ -0.81
SHMT2-211ENST00000554310 SIGLEC8Q9NYZ4 499 aa9.97□□□□□ -0.81
SHMT2-211ENST00000554310 THYN1Q9P016 225 aa9.97□□□□□ -0.81
SHMT2-211ENST00000554310 OR51B2Q9Y5P1 312 aa9.97□□□□□ -0.81
SHMT2-211ENST00000554310 TRBV7-1A0A0A6YYK4 115 aa9.96□□□□□ -0.82
SHMT2-211ENST00000554310 MFSD2BA6NFX1 497 aa9.96□□□□□ -0.82
SHMT2-211ENST00000554310 GGCTO75223 188 aaKnown RBP9.96□□□□□ -0.82
SHMT2-211ENST00000554310 PITX3O75364 302 aa9.96□□□□□ -0.82
SHMT2-211ENST00000554310 ATG12O94817 140 aa9.96□□□□□ -0.82
SHMT2-211ENST00000554310 OR13C7P0DN81 318 aa9.96□□□□□ -0.82
SHMT2-211ENST00000554310 WT1-ASQ06250 92 aa9.96□□□□□ -0.82
SHMT2-211ENST00000554310 EIF5AL1Q6IS14 154 aaKnown RBP9.96□□□□□ -0.82
SHMT2-211ENST00000554310 IL34Q6ZMJ4 242 aa9.96□□□□□ -0.82
SHMT2-211ENST00000554310 H2BFWTQ7Z2G1 175 aa9.96□□□□□ -0.82
SHMT2-211ENST00000554310 FAM219AQ8IW50 185 aa9.96□□□□□ -0.82
SHMT2-211ENST00000554310 EIF4E3Q8N5X7 224 aaKnown RBP9.96□□□□□ -0.82
SHMT2-211ENST00000554310 OR10W1Q8NGF6 305 aa9.96□□□□□ -0.82
SHMT2-211ENST00000554310 FBXL17Q9UF56 701 aa9.96□□□□□ -0.82
SHMT2-211ENST00000554310 SMAD5-AS1Q9Y6J3 95 aa9.96□□□□□ -0.82
SHMT2-211ENST00000554310 PPP5D1E7EU14 171 aa9.95□□□□□ -0.82
SHMT2-211ENST00000554310 JTBO76095 146 aa9.95□□□□□ -0.82
SHMT2-211ENST00000554310 IGKV1-39P01597 117 aa9.95□□□□□ -0.82
SHMT2-211ENST00000554310 IGKV1D-39P04432 117 aa9.95□□□□□ -0.82
SHMT2-211ENST00000554310 ARL3P36405 182 aa9.95□□□□□ -0.82
SHMT2-211ENST00000554310 TOR2AQ5JU69 321 aa9.95□□□□□ -0.82
SHMT2-211ENST00000554310 FAM74A1Q5RGS3 127 aa9.95□□□□□ -0.82
SHMT2-211ENST00000554310 CLEC19AQ6UXS0 136 aa9.95□□□□□ -0.82
SHMT2-211ENST00000554310 HAPLN4Q86UW8 402 aa9.95□□□□□ -0.82
SHMT2-211ENST00000554310 OR1L6Q8NGR2 347 aa9.95□□□□□ -0.82
SHMT2-211ENST00000554310 OR4A16Q8NH70 328 aa9.95□□□□□ -0.82
SHMT2-211ENST00000554310 RNF141Q8WVD5 230 aa9.95□□□□□ -0.82
SHMT2-211ENST00000554310 GPR146Q96CH1 333 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms