RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 IGHV1-69-2A0A0G2JMI3 117 aa10.45□□□□□ -0.74
SHMT2-205ENST00000553474 FCN3O75636 299 aa10.45□□□□□ -0.74
SHMT2-205ENST00000553474 GCGP01275 180 aa10.45□□□□□ -0.74
SHMT2-205ENST00000553474 IGHV1-8P0DP01 117 aa10.45□□□□□ -0.74
SHMT2-205ENST00000553474 CHRNB4P30926 498 aa10.45□□□□□ -0.74
SHMT2-205ENST00000553474 COX19Q49B96 90 aa10.45□□□□□ -0.74
SHMT2-205ENST00000553474 ZNF114Q8NC26 417 aa10.45□□□□□ -0.74
SHMT2-205ENST00000553474 EAF1Q96JC9 268 aaPredicted RBP10.45□□□□□ -0.74
SHMT2-205ENST00000553474 TRAPPC1Q9Y5R8 145 aa10.45□□□□□ -0.74
SHMT2-205ENST00000553474 ARFGEF3Q5TH69 2177 aa10.45□□□□□ -0.74
SHMT2-205ENST00000553474 PSMB11A5LHX3 300 aa10.44□□□□□ -0.74
SHMT2-205ENST00000553474 HELTA6NFD8 242 aa10.44□□□□□ -0.74
SHMT2-205ENST00000553474 E7EQL1 145 aa10.44□□□□□ -0.74
SHMT2-205ENST00000553474 FOXH1O75593 365 aa10.44□□□□□ -0.74
SHMT2-205ENST00000553474 IGLV2-23P01705 113 aa10.44□□□□□ -0.74
SHMT2-205ENST00000553474 AMBPP02760 352 aa10.44□□□□□ -0.74
SHMT2-205ENST00000553474 CD3EP07766 207 aa10.44□□□□□ -0.74
SHMT2-205ENST00000553474 FBXL19-AS1Q494R0 122 aa10.44□□□□□ -0.74
SHMT2-205ENST00000553474 DMRTC2Q8IXT2 367 aaPredicted RBP10.44□□□□□ -0.74
SHMT2-205ENST00000553474 ZCCHC24Q8N2G6 241 aaKnown RBP10.44□□□□□ -0.74
SHMT2-205ENST00000553474 TEX45Q8NA69 505 aa10.44□□□□□ -0.74
SHMT2-205ENST00000553474 THAP8Q8NA92 274 aa10.44□□□□□ -0.74
SHMT2-205ENST00000553474 TMEM133Q9H2Q1 129 aa10.44□□□□□ -0.74
SHMT2-205ENST00000553474 DNAJC4Q9NNZ3 241 aa10.44□□□□□ -0.74
SHMT2-205ENST00000553474 ZNRD1Q9P1U0 126 aa10.44□□□□□ -0.74
SHMT2-205ENST00000553474 CTSZQ9UBR2 303 aa10.44□□□□□ -0.74
SHMT2-205ENST00000553474 OR7C2O60412 319 aa10.44□□□□□ -0.74
SHMT2-205ENST00000553474 ACTL6BO94805 426 aa10.44□□□□□ -0.74
SHMT2-205ENST00000553474 COMPP49747 757 aaPredicted RBP10.44□□□□□ -0.74
SHMT2-205ENST00000553474 GNG4P50150 75 aa10.44□□□□□ -0.74
SHMT2-205ENST00000553474 PRRX1P54821 245 aa10.44□□□□□ -0.74
SHMT2-205ENST00000553474 PKIAP61925 76 aa10.44□□□□□ -0.74
SHMT2-205ENST00000553474 PAX2Q02962 417 aa10.44□□□□□ -0.74
SHMT2-205ENST00000553474 PVRIGQ6DKI7 326 aa10.44□□□□□ -0.74
SHMT2-205ENST00000553474 LYPD2Q6UXB3 125 aa10.44□□□□□ -0.74
SHMT2-205ENST00000553474 OR10W1Q8NGF6 305 aa10.44□□□□□ -0.74
SHMT2-205ENST00000553474 PRDM13Q9H4Q3 707 aa10.44□□□□□ -0.74
SHMT2-205ENST00000553474 ZNF430Q9H8G1 570 aaPredicted RBP10.44□□□□□ -0.74
SHMT2-205ENST00000553474 CBY1Q9Y3M2 126 aa10.44□□□□□ -0.74
SHMT2-205ENST00000553474 RELNP78509 3460 aa10.44□□□□□ -0.74
SHMT2-205ENST00000553474 TSTD3H0UI37 97 aa10.43□□□□□ -0.74
SHMT2-205ENST00000553474 CORTO00230 105 aa10.43□□□□□ -0.74
SHMT2-205ENST00000553474 TIGITQ495A1 244 aa10.43□□□□□ -0.74
SHMT2-205ENST00000553474 MMD2Q8IY49 270 aa10.43□□□□□ -0.74
SHMT2-205ENST00000553474 STXBP6Q8NFX7 210 aa10.43□□□□□ -0.74
SHMT2-205ENST00000553474 TMEM37Q8WXS4 190 aa10.43□□□□□ -0.74
SHMT2-205ENST00000553474 ZNF503Q96F45 646 aa10.43□□□□□ -0.74
SHMT2-205ENST00000553474 OSTCQ9NRP0 149 aa10.43□□□□□ -0.74
SHMT2-205ENST00000553474 TCRBV4S1A1TA0A5B7 111 aa10.42□□□□□ -0.74
SHMT2-205ENST00000553474 PGPEP1LA6NFU8 196 aa10.42□□□□□ -0.74
SHMT2-205ENST00000553474 K7EN84 100 aa10.42□□□□□ -0.74
SHMT2-205ENST00000553474 PPOXP50336 477 aa10.42□□□□□ -0.74
SHMT2-205ENST00000553474 TAS2R60P59551 318 aa10.42□□□□□ -0.74
SHMT2-205ENST00000553474 ZNF90Q03938 601 aa10.42□□□□□ -0.74
SHMT2-205ENST00000553474 WT1-ASQ06250 92 aa10.42□□□□□ -0.74
SHMT2-205ENST00000553474 RPEL1Q2QD12 228 aa10.42□□□□□ -0.74
SHMT2-205ENST00000553474 C22orf15Q8WYQ4 148 aa10.42□□□□□ -0.74
SHMT2-205ENST00000553474 RNF5Q99942 180 aa10.42□□□□□ -0.74
SHMT2-205ENST00000553474 CGB1A6NKQ9 187 aa10.42□□□□□ -0.74
SHMT2-205ENST00000553474 ISLRO14498 428 aa10.42□□□□□ -0.74
SHMT2-205ENST00000553474 MT-ND6P03923 174 aa10.42□□□□□ -0.74
SHMT2-205ENST00000553474 REG1BP48304 166 aa10.42□□□□□ -0.74
SHMT2-205ENST00000553474 MOB3BQ86TA1 216 aa10.42□□□□□ -0.74
SHMT2-205ENST00000553474 GBGT1Q8N5D6 347 aa10.42□□□□□ -0.74
SHMT2-205ENST00000553474 BEND2Q8NDZ0 799 aa10.42□□□□□ -0.74
SHMT2-205ENST00000553474 TMEM190Q8WZ59 177 aa10.42□□□□□ -0.74
SHMT2-205ENST00000553474 AURKAIP1Q9NWT8 199 aaPredicted RBP10.42□□□□□ -0.74
SHMT2-205ENST00000553474 TRAV20A0A0B4J274 112 aa10.41□□□□□ -0.74
SHMT2-205ENST00000553474 COX7A2P2O60397 106 aa10.41□□□□□ -0.74
SHMT2-205ENST00000553474 IGLV1-47P01700 117 aa10.41□□□□□ -0.74
SHMT2-205ENST00000553474 CRYGCP07315 174 aa10.41□□□□□ -0.74
SHMT2-205ENST00000553474 CRYBB3P26998 211 aa10.41□□□□□ -0.74
SHMT2-205ENST00000553474 LGALS4P56470 323 aa10.41□□□□□ -0.74
SHMT2-205ENST00000553474 ERVFC1-1P60608 527 aa10.41□□□□□ -0.74
SHMT2-205ENST00000553474 ADORA2A-AS1P86434 159 aa10.41□□□□□ -0.74
SHMT2-205ENST00000553474 CLEC12BQ2HXU8 276 aa10.41□□□□□ -0.74
SHMT2-205ENST00000553474 CENPWQ5EE01 88 aa10.41□□□□□ -0.74
SHMT2-205ENST00000553474 C10orf113Q5VZT2 155 aa10.41□□□□□ -0.74
SHMT2-205ENST00000553474 C11orf42Q8N5U0 333 aa10.41□□□□□ -0.74
SHMT2-205ENST00000553474 FAM167A-AS1Q96KT0 104 aa10.41□□□□□ -0.74
SHMT2-205ENST00000553474 TMEM68Q96MH6 324 aa10.41□□□□□ -0.74
SHMT2-205ENST00000553474 CDC42EP3Q9UKI2 254 aa10.41□□□□□ -0.74
SHMT2-205ENST00000553474 AMMECR1Q9Y4X0 333 aaPredicted RBP10.41□□□□□ -0.74
SHMT2-205ENST00000553474 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.4□□□□□ -0.74
SHMT2-205ENST00000553474 FAM90A27PA6NNH2 459 aa10.4□□□□□ -0.74
SHMT2-205ENST00000553474 GGTLC3B5MD39 225 aa10.4□□□□□ -0.74
SHMT2-205ENST00000553474 UBE2L3P68036 154 aaKnown RBP10.4□□□□□ -0.74
SHMT2-205ENST00000553474 WDR73Q6P4I2 378 aa10.4□□□□□ -0.74
SHMT2-205ENST00000553474 C8orf46Q8TAG6 207 aa10.4□□□□□ -0.74
SHMT2-205ENST00000553474 SMIM12Q96EX1 92 aa10.4□□□□□ -0.74
SHMT2-205ENST00000553474 GNB1LQ9BYB4 327 aa10.4□□□□□ -0.74
SHMT2-205ENST00000553474 V9GYV3 84 aa10.4□□□□□ -0.74
SHMT2-205ENST00000553474 ROS1P08922 2347 aa10.4□□□□□ -0.74
SHMT2-205ENST00000553474 FLNCQ14315 2725 aa10.4□□□□□ -0.74
SHMT2-205ENST00000553474 SPTBN1Q01082 2364 aaKnown RBP10.4□□□□□ -0.75
SHMT2-205ENST00000553474 IGHV2-26A0A0B4J1V2 119 aa10.39□□□□□ -0.75
SHMT2-205ENST00000553474 E7EUB6 86 aa10.39□□□□□ -0.75
SHMT2-205ENST00000553474 SLC25A17O43808 307 aa10.39□□□□□ -0.75
SHMT2-205ENST00000553474 GZMBP10144 247 aa10.39□□□□□ -0.75
SHMT2-205ENST00000553474 SUMO1P63165 101 aaKnown RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms