RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 ZNF600Q6ZNG1 722 aa9.65□□□□□ -0.86
ACTN1-207ENST00000553290 IL17DQ8TAD2 202 aa9.65□□□□□ -0.86
ACTN1-207ENST00000553290 IL22RA2Q969J5 263 aa9.65□□□□□ -0.86
ACTN1-207ENST00000553290 GPR146Q96CH1 333 aa9.65□□□□□ -0.86
ACTN1-207ENST00000553290 GALNT14Q96FL9 552 aa9.65□□□□□ -0.86
ACTN1-207ENST00000553290 MCUBQ9NWR8 336 aa9.65□□□□□ -0.86
ACTN1-207ENST00000553290 UBQLN2Q9UHD9 624 aa9.65□□□□□ -0.86
ACTN1-207ENST00000553290 CCDC160A6NGH7 325 aa9.64□□□□□ -0.87
ACTN1-207ENST00000553290 FAUP35544 74 aaKnown RBP9.64□□□□□ -0.87
ACTN1-207ENST00000553290 OPRK1P41145 380 aa9.64□□□□□ -0.87
ACTN1-207ENST00000553290 CMC4P56277 68 aaPredicted RBP9.64□□□□□ -0.87
ACTN1-207ENST00000553290 AP3S2P59780 193 aa9.64□□□□□ -0.87
ACTN1-207ENST00000553290 TMEM187Q14656 261 aa9.64□□□□□ -0.87
ACTN1-207ENST00000553290 ZFAND6Q6FIF0 208 aa9.64□□□□□ -0.87
ACTN1-207ENST00000553290 TOMM20LQ6UXN7 152 aa9.64□□□□□ -0.87
ACTN1-207ENST00000553290 OR4X1Q8NH49 305 aa9.64□□□□□ -0.87
ACTN1-207ENST00000553290 RNF2Q99496 336 aa9.64□□□□□ -0.87
ACTN1-207ENST00000553290 HEYLQ9NQ87 328 aaPredicted RBP9.64□□□□□ -0.87
ACTN1-207ENST00000553290 CACNG5Q9UF02 275 aa9.64□□□□□ -0.87
ACTN1-207ENST00000553290 RPS10-NUDT3A0A1W2PQS6 291 aa9.63□□□□□ -0.87
ACTN1-207ENST00000553290 CEBPZOSA8MTT3 80 aa9.63□□□□□ -0.87
ACTN1-207ENST00000553290 CLN5O75503 358 aa9.63□□□□□ -0.87
ACTN1-207ENST00000553290 S100A5P33763 92 aa9.63□□□□□ -0.87
ACTN1-207ENST00000553290 APOC4P55056 127 aa9.63□□□□□ -0.87
ACTN1-207ENST00000553290 ODF3L2Q3SX64 289 aa9.63□□□□□ -0.87
ACTN1-207ENST00000553290 C2orf83Q53S99 150 aa9.63□□□□□ -0.87
ACTN1-207ENST00000553290 PYDC2Q56P42 97 aa9.63□□□□□ -0.87
ACTN1-207ENST00000553290 TMEM230Q96A57 120 aa9.63□□□□□ -0.87
ACTN1-207ENST00000553290 FNDC4Q9H6D8 234 aaPredicted RBP9.63□□□□□ -0.87
ACTN1-207ENST00000553290 VSIRQ9H7M9 311 aa9.63□□□□□ -0.87
ACTN1-207ENST00000553290 PUS1Q9Y606 427 aaKnown RBP eCLIP9.63□□□□□ -0.87
ACTN1-207ENST00000553290 TRAV30A0A087WSZ9 112 aa9.62□□□□□ -0.87
ACTN1-207ENST00000553290 IGHV3-49A0A0A0MS15 119 aa9.62□□□□□ -0.87
ACTN1-207ENST00000553290 PIGBOS1A0A0B4J2F0 54 aa9.62□□□□□ -0.87
ACTN1-207ENST00000553290 UBE2CO00762 179 aa9.62□□□□□ -0.87
ACTN1-207ENST00000553290 SULT1A3P0DMM9 295 aa9.62□□□□□ -0.87
ACTN1-207ENST00000553290 SULT1A4P0DMN0 295 aa9.62□□□□□ -0.87
ACTN1-207ENST00000553290 ANXA3P12429 323 aa9.62□□□□□ -0.87
ACTN1-207ENST00000553290 AKR1C4P17516 323 aa9.62□□□□□ -0.87
ACTN1-207ENST00000553290 PAFAH1B2P68402 229 aa9.62□□□□□ -0.87
ACTN1-207ENST00000553290 SRPXP78539 464 aa9.62□□□□□ -0.87
ACTN1-207ENST00000553290 KLF9Q13886 244 aaPredicted RBP9.62□□□□□ -0.87
ACTN1-207ENST00000553290 FAM90A2PQ658T7 463 aa9.62□□□□□ -0.87
ACTN1-207ENST00000553290 NOXA1Q86UR1 476 aa9.62□□□□□ -0.87
ACTN1-207ENST00000553290 TOMM5Q8N4H5 51 aa9.62□□□□□ -0.87
ACTN1-207ENST00000553290 RNASEH2CQ8TDP1 164 aaKnown RBP9.62□□□□□ -0.87
ACTN1-207ENST00000553290 DEDD2Q8WXF8 326 aa9.62□□□□□ -0.87
ACTN1-207ENST00000553290 OVOL2Q9BRP0 275 aa9.62□□□□□ -0.87
ACTN1-207ENST00000553290 ZFAND3Q9H8U3 227 aa9.62□□□□□ -0.87
ACTN1-207ENST00000553290 TP53TG1Q9Y2A0 90 aa9.62□□□□□ -0.87
ACTN1-207ENST00000553290 RYR3Q15413 4870 aa9.62□□□□□ -0.87
ACTN1-207ENST00000553290 IGHV3OR16-13A0A075B7E8 117 aa9.61□□□□□ -0.87
ACTN1-207ENST00000553290 IGHV3-74A0A0B4J1X5 117 aa9.61□□□□□ -0.87
ACTN1-207ENST00000553290 A0A0B4J2A0 478 aa9.61□□□□□ -0.87
ACTN1-207ENST00000553290 KIR2DL5BA0A0G2JN68 375 aa9.61□□□□□ -0.87
ACTN1-207ENST00000553290 KIR2DL5BA0A0G2JPC4 375 aa9.61□□□□□ -0.87
ACTN1-207ENST00000553290 A0A1B0GU03 582 aa9.61□□□□□ -0.87
ACTN1-207ENST00000553290 A0A1W2PS18 150 aa9.61□□□□□ -0.87
ACTN1-207ENST00000553290 SLC25A4P12235 298 aa9.61□□□□□ -0.87
ACTN1-207ENST00000553290 NPPCP23582 126 aa9.61□□□□□ -0.87
ACTN1-207ENST00000553290 CCR6P51684 374 aa9.61□□□□□ -0.87
ACTN1-207ENST00000553290 SUPT4H1P63272 117 aaKnown RBP9.61□□□□□ -0.87
ACTN1-207ENST00000553290 MLANAQ16655 118 aa9.61□□□□□ -0.87
ACTN1-207ENST00000553290 NMSQ5H8A3 153 aa9.61□□□□□ -0.87
ACTN1-207ENST00000553290 Q6ZWC4 215 aa9.61□□□□□ -0.87
ACTN1-207ENST00000553290 TCF24Q7RTU0 167 aa9.61□□□□□ -0.87
ACTN1-207ENST00000553290 KIR2DL5AQ8N109 375 aa9.61□□□□□ -0.87
ACTN1-207ENST00000553290 LGI3Q8N145 548 aa9.61□□□□□ -0.87
ACTN1-207ENST00000553290 SLC24A4Q8NFF2 622 aa9.61□□□□□ -0.87
ACTN1-207ENST00000553290 KIR2DL5BQ8NHK3 375 aa9.61□□□□□ -0.87
ACTN1-207ENST00000553290 ST8SIA2Q92186 375 aa9.61□□□□□ -0.87
ACTN1-207ENST00000553290 TRIM63Q969Q1 353 aa9.61□□□□□ -0.87
ACTN1-207ENST00000553290 TMEM231Q9H6L2 316 aa9.61□□□□□ -0.87
ACTN1-207ENST00000553290 MRPL36Q9P0J6 103 aaKnown RBP9.61□□□□□ -0.87
ACTN1-207ENST00000553290 SHPKQ9UHJ6 478 aa9.61□□□□□ -0.87
ACTN1-207ENST00000553290 V9GYH0 126 aa9.61□□□□□ -0.87
ACTN1-207ENST00000553290 CSMD3Q7Z407 3707 aa9.61□□□□□ -0.87
ACTN1-207ENST00000553290 TENM2Q9NT68 2774 aa9.6□□□□□ -0.87
ACTN1-207ENST00000553290 ZNF701M0R085 212 aaPredicted RBP9.6□□□□□ -0.87
ACTN1-207ENST00000553290 TFPI2P48307 235 aa9.6□□□□□ -0.87
ACTN1-207ENST00000553290 TNFRSF9Q07011 255 aa9.6□□□□□ -0.87
ACTN1-207ENST00000553290 SMCO1Q147U7 214 aa9.6□□□□□ -0.87
ACTN1-207ENST00000553290 TMEM128Q5BJH2 165 aa9.6□□□□□ -0.87
ACTN1-207ENST00000553290 ETFRF1Q6IPR1 90 aa9.6□□□□□ -0.87
ACTN1-207ENST00000553290 WFDC3Q8IUB2 231 aa9.6□□□□□ -0.87
ACTN1-207ENST00000553290 STPG3Q8N7X2 389 aa9.6□□□□□ -0.87
ACTN1-207ENST00000553290 METTL26Q96S19 204 aa9.6□□□□□ -0.87
ACTN1-207ENST00000553290 RBM38Q9H0Z9 239 aaKnown RBP9.6□□□□□ -0.87
ACTN1-207ENST00000553290 PRR13Q9NZ81 148 aa9.6□□□□□ -0.87
ACTN1-207ENST00000553290 IGKV3-7A0A075B6H7 116 aa9.59□□□□□ -0.87
ACTN1-207ENST00000553290 TRAV2A0A0B4J234 112 aa9.59□□□□□ -0.87
ACTN1-207ENST00000553290 DUXBA0A1W2PPF3 345 aa9.59□□□□□ -0.87
ACTN1-207ENST00000553290 DNASE2O00115 360 aaPredicted RBP9.59□□□□□ -0.87
ACTN1-207ENST00000553290 SPRY2O43597 315 aa9.59□□□□□ -0.87
ACTN1-207ENST00000553290 IGKV1-17P01599 117 aa9.59□□□□□ -0.87
ACTN1-207ENST00000553290 APOHP02749 345 aaPredicted RBP9.59□□□□□ -0.87
ACTN1-207ENST00000553290 NPY1RP25929 384 aa9.59□□□□□ -0.87
ACTN1-207ENST00000553290 CRYBB3P26998 211 aa9.59□□□□□ -0.87
ACTN1-207ENST00000553290 RND2P52198 227 aa9.59□□□□□ -0.87
ACTN1-207ENST00000553290 ZNF79Q15937 498 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms