RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 TXN2Q99757 166 aa11.84□□□□□ -0.51
CDK4-215ENST00000553237 SLC25A21Q9BQT8 299 aaPredicted RBP11.84□□□□□ -0.51
CDK4-215ENST00000553237 PDCD10Q9BUL8 212 aa11.84□□□□□ -0.51
CDK4-215ENST00000553237 SMPXQ9UHP9 88 aa11.84□□□□□ -0.51
CDK4-215ENST00000553237 IGHV3OR16-13A0A075B7E8 117 aa11.83□□□□□ -0.52
CDK4-215ENST00000553237 IGHV3-74A0A0B4J1X5 117 aa11.83□□□□□ -0.52
CDK4-215ENST00000553237 LINC00854A0A1B0GVQ3 168 aa11.83□□□□□ -0.52
CDK4-215ENST00000553237 GNG7O60262 68 aa11.83□□□□□ -0.52
CDK4-215ENST00000553237 FCGR2BP31994 310 aaPredicted RBP11.83□□□□□ -0.52
CDK4-215ENST00000553237 SUPT4H1P63272 117 aaKnown RBP11.83□□□□□ -0.52
CDK4-215ENST00000553237 TMEM116Q8NCL8 245 aa11.83□□□□□ -0.52
CDK4-215ENST00000553237 GPR146Q96CH1 333 aa11.83□□□□□ -0.52
CDK4-215ENST00000553237 RNF2Q99496 336 aa11.83□□□□□ -0.52
CDK4-215ENST00000553237 RHPN1-AS1Q9BWJ2 59 aa11.83□□□□□ -0.52
CDK4-215ENST00000553237 DYNC2H1Q8NCM8 4307 aaKnown RBP11.82□□□□□ -0.52
CDK4-215ENST00000553237 IGHV7-4-1A0A0J9YVY3 117 aa11.82□□□□□ -0.52
CDK4-215ENST00000553237 A6NHS1 94 aa11.82□□□□□ -0.52
CDK4-215ENST00000553237 CHEK1O14757 476 aa11.82□□□□□ -0.52
CDK4-215ENST00000553237 HOXA1P49639 335 aaPredicted RBP11.82□□□□□ -0.52
CDK4-215ENST00000553237 CCR6P51684 374 aa11.82□□□□□ -0.52
CDK4-215ENST00000553237 DUSP18Q8NEJ0 188 aa11.82□□□□□ -0.52
CDK4-215ENST00000553237 IL22RA2Q969J5 263 aa11.82□□□□□ -0.52
CDK4-215ENST00000553237 ENY2Q9NPA8 101 aa11.82□□□□□ -0.52
CDK4-215ENST00000553237 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.82□□□□□ -0.52
CDK4-215ENST00000553237 CACNG5Q9UF02 275 aa11.82□□□□□ -0.52
CDK4-215ENST00000553237 IGKV3-7A0A075B6H7 116 aa11.81□□□□□ -0.52
CDK4-215ENST00000553237 TRAV14DV4A0A0A6YYC5 116 aa11.81□□□□□ -0.52
CDK4-215ENST00000553237 OR4C46A6NHA9 309 aa11.81□□□□□ -0.52
CDK4-215ENST00000553237 INS-IGF2F8WCM5 200 aa11.81□□□□□ -0.52
CDK4-215ENST00000553237 RNASE2P10153 161 aaKnown RBP11.81□□□□□ -0.52
CDK4-215ENST00000553237 ANXA3P12429 323 aa11.81□□□□□ -0.52
CDK4-215ENST00000553237 IL7P13232 177 aa11.81□□□□□ -0.52
CDK4-215ENST00000553237 NPBWR1P48145 328 aa11.81□□□□□ -0.52
CDK4-215ENST00000553237 TFPI2P48307 235 aa11.81□□□□□ -0.52
CDK4-215ENST00000553237 SUB1P53999 127 aaKnown RBP eCLIP11.81□□□□□ -0.52
CDK4-215ENST00000553237 ODF3L2Q3SX64 289 aa11.81□□□□□ -0.52
CDK4-215ENST00000553237 TMEM128Q5BJH2 165 aa11.81□□□□□ -0.52
CDK4-215ENST00000553237 TOMM20LQ6UXN7 152 aa11.81□□□□□ -0.52
CDK4-215ENST00000553237 LYZL2Q7Z4W2 148 aa11.81□□□□□ -0.52
CDK4-215ENST00000553237 OR10C1Q96KK4 312 aa11.81□□□□□ -0.52
CDK4-215ENST00000553237 OVOL2Q9BRP0 275 aa11.81□□□□□ -0.52
CDK4-215ENST00000553237 CSMD3Q7Z407 3707 aa11.81□□□□□ -0.52
CDK4-215ENST00000553237 NAP1L6A6NFF2 107 aa11.8□□□□□ -0.52
CDK4-215ENST00000553237 SPCS3P61009 180 aa11.8□□□□□ -0.52
CDK4-215ENST00000553237 RBMS2Q15434 407 aaKnown RBP11.8□□□□□ -0.52
CDK4-215ENST00000553237 MLANAQ16655 118 aa11.8□□□□□ -0.52
CDK4-215ENST00000553237 CNPY1Q3B7I2 92 aa11.8□□□□□ -0.52
CDK4-215ENST00000553237 AARDQ4LEZ3 155 aa11.8□□□□□ -0.52
CDK4-215ENST00000553237 LGI3Q8N145 548 aa11.8□□□□□ -0.52
CDK4-215ENST00000553237 A0A0B4J2A0 478 aa11.79□□□□□ -0.52
CDK4-215ENST00000553237 LCE6AA0A183 80 aa11.79□□□□□ -0.52
CDK4-215ENST00000553237 TMEM50AO95807 157 aa11.79□□□□□ -0.52
CDK4-215ENST00000553237 APOHP02749 345 aaPredicted RBP11.79□□□□□ -0.52
CDK4-215ENST00000553237 RPL35AP18077 110 aaKnown RBP11.79□□□□□ -0.52
CDK4-215ENST00000553237 VAMP1P23763 118 aa11.79□□□□□ -0.52
CDK4-215ENST00000553237 SRPXP78539 464 aa11.79□□□□□ -0.52
CDK4-215ENST00000553237 PVRIGQ6DKI7 326 aa11.79□□□□□ -0.52
CDK4-215ENST00000553237 CENPSQ8N2Z9 138 aa11.79□□□□□ -0.52
CDK4-215ENST00000553237 GBGT1Q8N5D6 347 aa11.79□□□□□ -0.52
CDK4-215ENST00000553237 OR52E5Q8NH55 327 aa11.79□□□□□ -0.52
CDK4-215ENST00000553237 MRPL36Q9P0J6 103 aaKnown RBP11.79□□□□□ -0.52
CDK4-215ENST00000553237 SHPKQ9UHJ6 478 aa11.79□□□□□ -0.52
CDK4-215ENST00000553237 PUS1Q9Y606 427 aaKnown RBP eCLIP11.79□□□□□ -0.52
CDK4-215ENST00000553237 STARD9Q9P2P6 4700 aa11.79□□□□□ -0.52
CDK4-215ENST00000553237 IGHV3-66A0A0C4DH42 116 aa11.78□□□□□ -0.52
CDK4-215ENST00000553237 CENPXA8MT69 81 aa11.78□□□□□ -0.52
CDK4-215ENST00000553237 NDUFB6O95139 128 aa11.78□□□□□ -0.52
CDK4-215ENST00000553237 SULT1A3P0DMM9 295 aa11.78□□□□□ -0.52
CDK4-215ENST00000553237 SULT1A4P0DMN0 295 aa11.78□□□□□ -0.52
CDK4-215ENST00000553237 OPRK1P41145 380 aa11.78□□□□□ -0.52
CDK4-215ENST00000553237 APOC4P55056 127 aa11.78□□□□□ -0.52
CDK4-215ENST00000553237 PPP1R1AQ13522 171 aa11.78□□□□□ -0.52
CDK4-215ENST00000553237 NMSQ5H8A3 153 aa11.78□□□□□ -0.52
CDK4-215ENST00000553237 ZNF600Q6ZNG1 722 aa11.78□□□□□ -0.52
CDK4-215ENST00000553237 APRG1Q8IVJ8 170 aa11.78□□□□□ -0.52
CDK4-215ENST00000553237 IL17DQ8TAD2 202 aa11.78□□□□□ -0.52
CDK4-215ENST00000553237 GINS3Q9BRX5 216 aa11.78□□□□□ -0.52
CDK4-215ENST00000553237 FNDC4Q9H6D8 234 aaPredicted RBP11.78□□□□□ -0.52
CDK4-215ENST00000553237 CORTO00230 105 aa11.77□□□□□ -0.53
CDK4-215ENST00000553237 NXPH3O95157 252 aa11.77□□□□□ -0.53
CDK4-215ENST00000553237 SFT2D2O95562 160 aa11.77□□□□□ -0.53
CDK4-215ENST00000553237 BTCP35070 178 aa11.77□□□□□ -0.53
CDK4-215ENST00000553237 ZNF124Q15973 351 aa11.77□□□□□ -0.53
CDK4-215ENST00000553237 DEFB135Q30KP9 77 aa11.77□□□□□ -0.53
CDK4-215ENST00000553237 TCF24Q7RTU0 167 aa11.77□□□□□ -0.53
CDK4-215ENST00000553237 WFDC3Q8IUB2 231 aa11.77□□□□□ -0.53
CDK4-215ENST00000553237 LILRB2Q8N423 598 aa11.77□□□□□ -0.53
CDK4-215ENST00000553237 ST8SIA2Q92186 375 aa11.77□□□□□ -0.53
CDK4-215ENST00000553237 C7orf50Q9BRJ6 194 aaKnown RBP11.77□□□□□ -0.53
CDK4-215ENST00000553237 FLVCR2Q9UPI3 526 aa11.77□□□□□ -0.53
CDK4-215ENST00000553237 PIGBOS1A0A0B4J2F0 54 aa11.76□□□□□ -0.53
CDK4-215ENST00000553237 A0A1B0GU03 582 aa11.76□□□□□ -0.53
CDK4-215ENST00000553237 CEBPZOSA8MTT3 80 aa11.76□□□□□ -0.53
CDK4-215ENST00000553237 PLA2G10O15496 165 aa11.76□□□□□ -0.53
CDK4-215ENST00000553237 SPRY2O43597 315 aa11.76□□□□□ -0.53
CDK4-215ENST00000553237 SMCO1Q147U7 214 aa11.76□□□□□ -0.53
CDK4-215ENST00000553237 FAM90A2PQ658T7 463 aa11.76□□□□□ -0.53
CDK4-215ENST00000553237 LINC00299Q6ZSB3 139 aa11.76□□□□□ -0.53
CDK4-215ENST00000553237 ZFAND3Q9H8U3 227 aa11.76□□□□□ -0.53
CDK4-215ENST00000553237 HEYLQ9NQ87 328 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms