RNA–Protein interactions for RNA: ENST00000550267.1

VPS29-208, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 810 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-208ENST00000550267 FCER2P06734 321 aa7.47□□□□□ -1.21
VPS29-208ENST00000550267 MYL9P24844 172 aa7.47□□□□□ -1.21
VPS29-208ENST00000550267 G6PCP35575 357 aa7.47□□□□□ -1.21
VPS29-208ENST00000550267 TMEM17Q86X19 198 aa7.47□□□□□ -1.21
VPS29-208ENST00000550267 BEST4Q8NFU0 473 aa7.47□□□□□ -1.21
VPS29-208ENST00000550267 PINX1Q96BK5 328 aaKnown RBP7.47□□□□□ -1.21
VPS29-208ENST00000550267 GRAMD2BQ96HH9 432 aa7.47□□□□□ -1.21
VPS29-208ENST00000550267 CCDC90BQ9GZT6 254 aa7.47□□□□□ -1.21
VPS29-208ENST00000550267 A0A1B0GU03 582 aa7.46□□□□□ -1.22
VPS29-208ENST00000550267 LPAR6P43657 344 aa7.46□□□□□ -1.22
VPS29-208ENST00000550267 RNF212Q495C1 297 aa7.46□□□□□ -1.22
VPS29-208ENST00000550267 ZNF600Q6ZNG1 722 aa7.46□□□□□ -1.22
VPS29-208ENST00000550267 FCAMRQ8WWV6 532 aa7.46□□□□□ -1.22
VPS29-208ENST00000550267 TMEM231Q9H6L2 316 aa7.46□□□□□ -1.22
VPS29-208ENST00000550267 PRNDQ9UKY0 176 aa7.46□□□□□ -1.22
VPS29-208ENST00000550267 RGS10O43665 173 aa7.45□□□□□ -1.22
VPS29-208ENST00000550267 RLN1P04808 185 aa7.45□□□□□ -1.22
VPS29-208ENST00000550267 SPART-AS1P0CW21 52 aa7.45□□□□□ -1.22
VPS29-208ENST00000550267 F2RP25116 425 aa7.45□□□□□ -1.22
VPS29-208ENST00000550267 GNRHRP30968 328 aa7.45□□□□□ -1.22
VPS29-208ENST00000550267 EMP1P54849 157 aa7.45□□□□□ -1.22
VPS29-208ENST00000550267 TPRA1Q86W33 373 aa7.45□□□□□ -1.22
VPS29-208ENST00000550267 HOGA1Q86XE5 327 aa7.45□□□□□ -1.22
VPS29-208ENST00000550267 DCANP1Q8TF63 244 aa7.45□□□□□ -1.22
VPS29-208ENST00000550267 MOB3AQ96BX8 217 aa7.45□□□□□ -1.22
VPS29-208ENST00000550267 FAM210BQ96KR6 192 aa7.45□□□□□ -1.22
VPS29-208ENST00000550267 RAB40CQ96S21 281 aa7.45□□□□□ -1.22
VPS29-208ENST00000550267 DUSP21Q9H596 190 aa7.45□□□□□ -1.22
VPS29-208ENST00000550267 XCL2Q9UBD3 114 aa7.45□□□□□ -1.22
VPS29-208ENST00000550267 A0A1W2PS18 150 aa7.44□□□□□ -1.22
VPS29-208ENST00000550267 PGLYRP1O75594 196 aaPredicted RBP7.44□□□□□ -1.22
VPS29-208ENST00000550267 SCGNO76038 276 aa7.44□□□□□ -1.22
VPS29-208ENST00000550267 HTN3P15516 51 aa7.44□□□□□ -1.22
VPS29-208ENST00000550267 NPPCP23582 126 aa7.44□□□□□ -1.22
VPS29-208ENST00000550267 P2RY1P47900 373 aa7.44□□□□□ -1.22
VPS29-208ENST00000550267 PSMG4Q5JS54 123 aa7.44□□□□□ -1.22
VPS29-208ENST00000550267 OGFRL1Q5TC84 451 aaPredicted RBP7.44□□□□□ -1.22
VPS29-208ENST00000550267 C22orf42Q6IC83 251 aa7.44□□□□□ -1.22
VPS29-208ENST00000550267 CADM3Q8N126 398 aa7.44□□□□□ -1.22
VPS29-208ENST00000550267 ZNF114Q8NC26 417 aa7.44□□□□□ -1.22
VPS29-208ENST00000550267 C1QTNF4Q9BXJ3 329 aa7.44□□□□□ -1.22
VPS29-208ENST00000550267 FKBP11Q9NYL4 201 aa7.44□□□□□ -1.22
VPS29-208ENST00000550267 TPRKBQ9Y3C4 175 aa7.44□□□□□ -1.22
VPS29-208ENST00000550267 TRAV18A0A075B6X5 111 aa7.43□□□□□ -1.22
VPS29-208ENST00000550267 TRDV1A0A1B0GX56 115 aa7.43□□□□□ -1.22
VPS29-208ENST00000550267 TMEM50AO95807 157 aa7.43□□□□□ -1.22
VPS29-208ENST00000550267 NPBWR1P48145 328 aa7.43□□□□□ -1.22
VPS29-208ENST00000550267 PPP5CP53041 499 aa7.43□□□□□ -1.22
VPS29-208ENST00000550267 HERV-K104P61576 105 aa7.43□□□□□ -1.22
VPS29-208ENST00000550267 ZNF367Q7RTV3 350 aa7.43□□□□□ -1.22
VPS29-208ENST00000550267 TSPAN14Q8NG11 270 aa7.43□□□□□ -1.22
VPS29-208ENST00000550267 LGALS14Q8TCE9 139 aa7.43□□□□□ -1.22
VPS29-208ENST00000550267 DAPK2Q9UIK4 370 aa7.43□□□□□ -1.22
VPS29-208ENST00000550267 IGHV3OR16-12A0A075B7B8 117 aa7.42□□□□□ -1.22
VPS29-208ENST00000550267 HELTA6NFD8 242 aa7.42□□□□□ -1.22
VPS29-208ENST00000550267 CRYBB3P26998 211 aa7.42□□□□□ -1.22
VPS29-208ENST00000550267 FGF9P31371 208 aaPredicted RBP7.42□□□□□ -1.22
VPS29-208ENST00000550267 NUTF2P61970 127 aaKnown RBP7.42□□□□□ -1.22
VPS29-208ENST00000550267 PRCDQ00LT1 54 aa7.42□□□□□ -1.22
VPS29-208ENST00000550267 DHRS2Q13268 280 aa7.42□□□□□ -1.22
VPS29-208ENST00000550267 SPINK9Q5DT21 86 aa7.42□□□□□ -1.22
VPS29-208ENST00000550267 FAM222AQ5U5X8 452 aa7.42□□□□□ -1.22
VPS29-208ENST00000550267 TMEM88Q6PEY1 159 aa7.42□□□□□ -1.22
VPS29-208ENST00000550267 PRSS48Q7RTY5 328 aa7.42□□□□□ -1.22
VPS29-208ENST00000550267 C6orf223Q8N319 242 aa7.42□□□□□ -1.22
VPS29-208ENST00000550267 OR5AP2Q8NGF4 316 aa7.42□□□□□ -1.22
VPS29-208ENST00000550267 BORCS5Q969J3 196 aa7.42□□□□□ -1.22
VPS29-208ENST00000550267 METTL26Q96S19 204 aa7.42□□□□□ -1.22
VPS29-208ENST00000550267 NEU1Q99519 415 aa7.42□□□□□ -1.22
VPS29-208ENST00000550267 TSC22D3Q99576 134 aa7.42□□□□□ -1.22
VPS29-208ENST00000550267 NIPSNAP3BQ9BS92 247 aa7.42□□□□□ -1.22
VPS29-208ENST00000550267 NDUFB11Q9NX14 153 aa7.42□□□□□ -1.22
VPS29-208ENST00000550267 RHBDL2Q9NX52 303 aa7.42□□□□□ -1.22
VPS29-208ENST00000550267 DKK2Q9UBU2 259 aa7.42□□□□□ -1.22
VPS29-208ENST00000550267 AGRNO00468 2067 aa7.41□□□□□ -1.22
VPS29-208ENST00000550267 TMEM189A5PLL7 270 aa7.41□□□□□ -1.22
VPS29-208ENST00000550267 MEIS3P1A6NDR6 274 aa7.41□□□□□ -1.22
VPS29-208ENST00000550267 ZNF705FA8MVS1 300 aaPredicted RBP7.41□□□□□ -1.22
VPS29-208ENST00000550267 H3BMM0 161 aa7.41□□□□□ -1.22
VPS29-208ENST00000550267 ZNF705DP0CH99 300 aaPredicted RBP7.41□□□□□ -1.22
VPS29-208ENST00000550267 ZNF705BP0CI00 300 aaPredicted RBP7.41□□□□□ -1.22
VPS29-208ENST00000550267 ERHP84090 104 aaKnown RBP7.41□□□□□ -1.22
VPS29-208ENST00000550267 ZNF705AQ6ZN79 300 aaPredicted RBP7.41□□□□□ -1.22
VPS29-208ENST00000550267 SPATA12Q7Z6I5 190 aa7.41□□□□□ -1.22
VPS29-208ENST00000550267 OR4A16Q8NH70 328 aa7.41□□□□□ -1.22
VPS29-208ENST00000550267 YTHDF1Q9BYJ9 559 aaKnown RBP7.41□□□□□ -1.22
VPS29-208ENST00000550267 RNF167Q9H6Y7 350 aa7.41□□□□□ -1.22
VPS29-208ENST00000550267 EHFQ9NZC4 300 aa7.41□□□□□ -1.22
VPS29-208ENST00000550267 MRPL36Q9P0J6 103 aaKnown RBP7.41□□□□□ -1.22
VPS29-208ENST00000550267 RRP15Q9Y3B9 282 aaKnown RBP7.41□□□□□ -1.22
VPS29-208ENST00000550267 TMED3Q9Y3Q3 217 aa7.41□□□□□ -1.22
VPS29-208ENST00000550267 NBDYA0A0U1RRE5 68 aa7.4□□□□□ -1.22
VPS29-208ENST00000550267 FXYD7P58549 80 aa7.4□□□□□ -1.22
VPS29-208ENST00000550267 HSPE1P61604 102 aaKnown RBP7.4□□□□□ -1.22
VPS29-208ENST00000550267 TBCEQ15813 527 aaPredicted RBP7.4□□□□□ -1.22
VPS29-208ENST00000550267 KCTD21Q4G0X4 260 aa7.4□□□□□ -1.22
VPS29-208ENST00000550267 OR5H6Q8NGV6 325 aa7.4□□□□□ -1.22
VPS29-208ENST00000550267 TMEM230Q96A57 120 aa7.4□□□□□ -1.22
VPS29-208ENST00000550267 SLC25A38Q96DW6 304 aa7.4□□□□□ -1.22
VPS29-208ENST00000550267 NARS2Q96I59 477 aaKnown RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms