RNA–Protein interactions for RNA: ENST00000549727.1

ATP2B1-206, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 2

Gene ATP2B1, Length 1,430 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-206ENST00000549727 MRGPRDQ8TDS7 321 aa3.84□□□□□ -1.79
ATP2B1-206ENST00000549727 RXFP4Q8TDU9 374 aa3.84□□□□□ -1.79
ATP2B1-206ENST00000549727 CLDN23Q96B33 292 aa3.84□□□□□ -1.79
ATP2B1-206ENST00000549727 FAM19A4Q96LR4 140 aa3.84□□□□□ -1.79
ATP2B1-206ENST00000549727 IMMP1LQ96LU5 166 aa3.84□□□□□ -1.79
ATP2B1-206ENST00000549727 C12orf57Q99622 126 aa3.84□□□□□ -1.79
ATP2B1-206ENST00000549727 FAAP24Q9BTP7 215 aa3.84□□□□□ -1.79
ATP2B1-206ENST00000549727 SLC35B3Q9H1N7 401 aa3.84□□□□□ -1.79
ATP2B1-206ENST00000549727 MS4A6AQ9H2W1 248 aa3.84□□□□□ -1.79
ATP2B1-206ENST00000549727 PLEKHF2Q9H8W4 249 aa3.84□□□□□ -1.79
ATP2B1-206ENST00000549727 RPS10P5Q9NQ39 176 aa3.84□□□□□ -1.79
ATP2B1-206ENST00000549727 TMEM38BQ9NVV0 291 aa3.84□□□□□ -1.79
ATP2B1-206ENST00000549727 CACFD1Q9UGQ2 172 aa3.84□□□□□ -1.79
ATP2B1-206ENST00000549727 AK3Q9UIJ7 227 aa3.84□□□□□ -1.79
ATP2B1-206ENST00000549727 MCTS1Q9ULC4 181 aaKnown RBP3.84□□□□□ -1.79
ATP2B1-206ENST00000549727 ADAMTS9Q9P2N4 1935 aa3.83□□□□□ -1.8
ATP2B1-206ENST00000549727 CHD7Q9P2D1 2997 aa3.83□□□□□ -1.8
ATP2B1-206ENST00000549727 IGHV3OR16-9A0A0B4J2B5 98 aa3.83□□□□□ -1.8
ATP2B1-206ENST00000549727 IGKV1D-13A0A0B4J2D9 117 aa3.83□□□□□ -1.8
ATP2B1-206ENST00000549727 CENPVL3A0A0U1RRI6 287 aa3.83□□□□□ -1.8
ATP2B1-206ENST00000549727 C3orf85A0A1B0GTC6 90 aa3.83□□□□□ -1.8
ATP2B1-206ENST00000549727 ZNF729A6NN14 1252 aaPredicted RBP3.83□□□□□ -1.8
ATP2B1-206ENST00000549727 COLCA2A8K830 154 aa3.83□□□□□ -1.8
ATP2B1-206ENST00000549727 C15orf65H3BRN8 121 aa3.83□□□□□ -1.8
ATP2B1-206ENST00000549727 RPL36A-HNRNPH2H7BZ11 118 aa3.83□□□□□ -1.8
ATP2B1-206ENST00000549727 CNIH1O95406 144 aa3.83□□□□□ -1.8
ATP2B1-206ENST00000549727 MMP7P09237 267 aaPredicted RBP3.83□□□□□ -1.8
ATP2B1-206ENST00000549727 OR5AC1P0C628 307 aa3.83□□□□□ -1.8
ATP2B1-206ENST00000549727 NBEAP1P0C6P0 100 aa3.83□□□□□ -1.8
ATP2B1-206ENST00000549727 SMIM6P0DI80 62 aa3.83□□□□□ -1.8
ATP2B1-206ENST00000549727 IGKV1-13P0DP09 117 aa3.83□□□□□ -1.8
ATP2B1-206ENST00000549727 CD99P14209 185 aa3.83□□□□□ -1.8
ATP2B1-206ENST00000549727 ZNF14P17017 642 aaPredicted RBP3.83□□□□□ -1.8
ATP2B1-206ENST00000549727 TSPOP30536 169 aa3.83□□□□□ -1.8
ATP2B1-206ENST00000549727 MYCNOSP40205 109 aa3.83□□□□□ -1.8
ATP2B1-206ENST00000549727 TCL1AP56279 114 aa3.83□□□□□ -1.8
ATP2B1-206ENST00000549727 FXYD4P59646 89 aa3.83□□□□□ -1.8
ATP2B1-206ENST00000549727 OR8G1Q15617 311 aa3.83□□□□□ -1.8
ATP2B1-206ENST00000549727 RSPO1Q2MKA7 263 aaPredicted RBP3.83□□□□□ -1.8
ATP2B1-206ENST00000549727 MPV17LQ2QL34 196 aa3.83□□□□□ -1.8
ATP2B1-206ENST00000549727 TMEM97Q5BJF2 176 aa3.83□□□□□ -1.8
ATP2B1-206ENST00000549727 SLC35E4Q6ICL7 350 aa3.83□□□□□ -1.8
ATP2B1-206ENST00000549727 GUSBP11Q6P575 273 aa3.83□□□□□ -1.8
ATP2B1-206ENST00000549727 LINC00596Q86U02 117 aa3.83□□□□□ -1.8
ATP2B1-206ENST00000549727 MKXQ8IYA7 352 aa3.83□□□□□ -1.8
ATP2B1-206ENST00000549727 SFT2D1Q8WV19 159 aa3.83□□□□□ -1.8
ATP2B1-206ENST00000549727 MAFIPQ8WZ33 124 aa3.83□□□□□ -1.8
ATP2B1-206ENST00000549727 TCEAL3Q969E4 200 aa3.83□□□□□ -1.8
ATP2B1-206ENST00000549727 IL22RA2Q969J5 263 aa3.83□□□□□ -1.8
ATP2B1-206ENST00000549727 RBMXL1Q96E39 390 aaKnown RBP3.83□□□□□ -1.8
ATP2B1-206ENST00000549727 CLEC7AQ9BXN2 247 aa3.83□□□□□ -1.8
ATP2B1-206ENST00000549727 OCR1Q9BZK8 76 aa3.83□□□□□ -1.8
ATP2B1-206ENST00000549727 TREM2Q9NZC2 230 aa3.83□□□□□ -1.8
ATP2B1-206ENST00000549727 RP1P56715 2156 aa3.83□□□□□ -1.8
ATP2B1-206ENST00000549727 EXPH5Q8NEV8 1989 aa3.82□□□□□ -1.8
ATP2B1-206ENST00000549727 SEC16AO15027 2179 aa3.82□□□□□ -1.8
ATP2B1-206ENST00000549727 ALPK2Q86TB3 2170 aa3.82□□□□□ -1.8
ATP2B1-206ENST00000549727 IGHV1OR15-1A0A075B7D0 117 aa3.82□□□□□ -1.8
ATP2B1-206ENST00000549727 TRAV9-2A0A087WT02 112 aa3.82□□□□□ -1.8
ATP2B1-206ENST00000549727 IGHV3-15A0A0B4J1V0 119 aa3.82□□□□□ -1.8
ATP2B1-206ENST00000549727 A0A0J9YW62 118 aa3.82□□□□□ -1.8
ATP2B1-206ENST00000549727 C7orf77A4D0Y5 90 aa3.82□□□□□ -1.8
ATP2B1-206ENST00000549727 SMIM1B2RUZ4 78 aa3.82□□□□□ -1.8
ATP2B1-206ENST00000549727 B4DEV8 164 aa3.82□□□□□ -1.8
ATP2B1-206ENST00000549727 TRAPPC2LH3BP13 241 aa3.82□□□□□ -1.8
ATP2B1-206ENST00000549727 GEMIN2O14893 280 aaKnown RBP3.82□□□□□ -1.8
ATP2B1-206ENST00000549727 ANGPTL7O43827 346 aa3.82□□□□□ -1.8
ATP2B1-206ENST00000549727 PITX3O75364 302 aa3.82□□□□□ -1.8
ATP2B1-206ENST00000549727 OR7C1O76099 320 aaPredicted RBP3.82□□□□□ -1.8
ATP2B1-206ENST00000549727 PPYP01298 95 aa3.82□□□□□ -1.8
ATP2B1-206ENST00000549727 CCL3P10147 92 aa3.82□□□□□ -1.8
ATP2B1-206ENST00000549727 COX6A1P12074 109 aa3.82□□□□□ -1.8
ATP2B1-206ENST00000549727 SLC25A6P12236 298 aa3.82□□□□□ -1.8
ATP2B1-206ENST00000549727 ZNF32P17041 273 aa3.82□□□□□ -1.8
ATP2B1-206ENST00000549727 VDAC1P21796 283 aa3.82□□□□□ -1.8
ATP2B1-206ENST00000549727 NFYBP25208 207 aa3.82□□□□□ -1.8
ATP2B1-206ENST00000549727 OPRM1P35372 400 aa3.82□□□□□ -1.8
ATP2B1-206ENST00000549727 RBM11P57052 281 aaKnown RBP3.82□□□□□ -1.8
ATP2B1-206ENST00000549727 PSG4Q00888 419 aa3.82□□□□□ -1.8
ATP2B1-206ENST00000549727 LRRC75BQ2VPJ9 315 aa3.82□□□□□ -1.8
ATP2B1-206ENST00000549727 CEACAM16Q2WEN9 425 aa3.82□□□□□ -1.8
ATP2B1-206ENST00000549727 SP6Q3SY56 376 aa3.82□□□□□ -1.8
ATP2B1-206ENST00000549727 ZNF774Q6NX45 483 aa3.82□□□□□ -1.8
ATP2B1-206ENST00000549727 Q6ZVH6 145 aa3.82□□□□□ -1.8
ATP2B1-206ENST00000549727 LYZL2Q7Z4W2 148 aa3.82□□□□□ -1.8
ATP2B1-206ENST00000549727 ZIC4Q8N9L1 334 aa3.82□□□□□ -1.8
ATP2B1-206ENST00000549727 SUMF2Q8NBJ7 301 aa3.82□□□□□ -1.8
ATP2B1-206ENST00000549727 OR10AD1Q8NGE0 317 aa3.82□□□□□ -1.8
ATP2B1-206ENST00000549727 OR2G3Q8NGZ4 309 aa3.82□□□□□ -1.8
ATP2B1-206ENST00000549727 OR10J5Q8NHC4 309 aa3.82□□□□□ -1.8
ATP2B1-206ENST00000549727 MALSU1Q96EH3 234 aa3.82□□□□□ -1.8
ATP2B1-206ENST00000549727 BTF3L4Q96K17 158 aa3.82□□□□□ -1.8
ATP2B1-206ENST00000549727 PRAC1Q96KF2 57 aa3.82□□□□□ -1.8
ATP2B1-206ENST00000549727 LITAFQ99732 161 aa3.82□□□□□ -1.8
ATP2B1-206ENST00000549727 ADAT1Q9BUB4 502 aaKnown RBP3.82□□□□□ -1.8
ATP2B1-206ENST00000549727 SMIM3Q9BZL3 60 aa3.82□□□□□ -1.8
ATP2B1-206ENST00000549727 LINC00470Q9BZP3 86 aa3.82□□□□□ -1.8
ATP2B1-206ENST00000549727 OR2H1Q9GZK4 316 aa3.82□□□□□ -1.8
ATP2B1-206ENST00000549727 TMEM222Q9H0R3 208 aa3.82□□□□□ -1.8
ATP2B1-206ENST00000549727 SH2D2AQ9NP31 389 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms