RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 TMEM14EPQ6UXP3 125 aa16.34■□□□□ 0.21
VPS29-206ENST00000549578 OR4F17Q8NGA8 305 aa16.34■□□□□ 0.21
VPS29-206ENST00000549578 OR1N2Q8NGR9 330 aa16.34■□□□□ 0.21
VPS29-206ENST00000549578 OR4F4Q96R69 305 aa16.34■□□□□ 0.21
VPS29-206ENST00000549578 ZC4H2Q9NQZ6 224 aa16.34■□□□□ 0.21
VPS29-206ENST00000549578 VWFP04275 2813 aa16.34■□□□□ 0.21
VPS29-206ENST00000549578 WNK1Q9H4A3 2382 aa16.33■□□□□ 0.2
VPS29-206ENST00000549578 A0A1B0GVG6 124 aa16.33■□□□□ 0.2
VPS29-206ENST00000549578 FAM24AA6NFZ4 105 aa16.33■□□□□ 0.2
VPS29-206ENST00000549578 CLEC3BP05452 202 aa16.33■□□□□ 0.2
VPS29-206ENST00000549578 CD69Q07108 199 aa16.33■□□□□ 0.2
VPS29-206ENST00000549578 Q56UQ5 140 aa16.33■□□□□ 0.2
VPS29-206ENST00000549578 OR8G2PQ6IF36 304 aa16.33■□□□□ 0.2
VPS29-206ENST00000549578 RNF126Q9BV68 326 aa16.33■□□□□ 0.2
VPS29-206ENST00000549578 TRAV14DV4A0A0A6YYC5 116 aa16.32■□□□□ 0.2
VPS29-206ENST00000549578 RPS10-NUDT3A0A1W2PQS6 291 aa16.32■□□□□ 0.2
VPS29-206ENST00000549578 OR2T8A6NH00 312 aa16.32■□□□□ 0.2
VPS29-206ENST00000549578 HSPB1P04792 205 aaKnown RBP16.32■□□□□ 0.2
VPS29-206ENST00000549578 PET100P0DJ07 73 aa16.32■□□□□ 0.2
VPS29-206ENST00000549578 MFAP4P55083 255 aa16.32■□□□□ 0.2
VPS29-206ENST00000549578 RAP2BP61225 183 aa16.32■□□□□ 0.2
VPS29-206ENST00000549578 ZNF616Q08AN1 781 aa16.32■□□□□ 0.2
VPS29-206ENST00000549578 SLC16A13Q7RTY0 426 aa16.32■□□□□ 0.2
VPS29-206ENST00000549578 ASB13Q8WXK3 278 aa16.32■□□□□ 0.2
VPS29-206ENST00000549578 DPF1Q92782 380 aa16.32■□□□□ 0.2
VPS29-206ENST00000549578 RANGRFQ9HD47 186 aaPredicted RBP16.32■□□□□ 0.2
VPS29-206ENST00000549578 LYRM2Q9NU23 88 aaPredicted RBP16.32■□□□□ 0.2
VPS29-206ENST00000549578 MBD2Q9UBB5 411 aa16.32■□□□□ 0.2
VPS29-206ENST00000549578 TRRAPQ9Y4A5 3859 aa16.32■□□□□ 0.2
VPS29-206ENST00000549578 PMS2P5A8MQ11 134 aa16.31■□□□□ 0.2
VPS29-206ENST00000549578 PRSS46E5RG02 174 aa16.31■□□□□ 0.2
VPS29-206ENST00000549578 E5RGE8 158 aa16.31■□□□□ 0.2
VPS29-206ENST00000549578 BMPR1BO00238 502 aa16.31■□□□□ 0.2
VPS29-206ENST00000549578 FHL3Q13643 280 aa16.31■□□□□ 0.2
VPS29-206ENST00000549578 Q5BKY6 102 aa16.31■□□□□ 0.2
VPS29-206ENST00000549578 PRSS54Q6PEW0 395 aa16.31■□□□□ 0.2
VPS29-206ENST00000549578 IGSF23A1L1A6 192 aa16.3■□□□□ 0.2
VPS29-206ENST00000549578 LINC01619G3V211 115 aa16.3■□□□□ 0.2
VPS29-206ENST00000549578 PF4P02776 101 aa16.3■□□□□ 0.2
VPS29-206ENST00000549578 ARL3P36405 182 aa16.3■□□□□ 0.2
VPS29-206ENST00000549578 MYCNOSP40205 109 aa16.3■□□□□ 0.2
VPS29-206ENST00000549578 ETFRF1Q6IPR1 90 aa16.3■□□□□ 0.2
VPS29-206ENST00000549578 HAPLN4Q86UW8 402 aa16.3■□□□□ 0.2
VPS29-206ENST00000549578 CST7O76096 145 aa16.29■□□□□ 0.2
VPS29-206ENST00000549578 SLC25A4P12235 298 aa16.29■□□□□ 0.2
VPS29-206ENST00000549578 RND2P52198 227 aa16.29■□□□□ 0.2
VPS29-206ENST00000549578 SLURP1P55000 103 aa16.29■□□□□ 0.2
VPS29-206ENST00000549578 ARL16Q0P5N6 197 aa16.29■□□□□ 0.2
VPS29-206ENST00000549578 FAM209BQ5JX69 171 aa16.29■□□□□ 0.2
VPS29-206ENST00000549578 TMEM252Q8N6L7 170 aa16.29■□□□□ 0.2
VPS29-206ENST00000549578 OR2T35Q8NGX2 323 aa16.29■□□□□ 0.2
VPS29-206ENST00000549578 ACY3Q96HD9 319 aa16.29■□□□□ 0.2
VPS29-206ENST00000549578 TXN2Q99757 166 aa16.29■□□□□ 0.2
VPS29-206ENST00000549578 TGOLN2O43493 480 aa16.29■□□□□ 0.2
VPS29-206ENST00000549578 GNG7O60262 68 aa16.29■□□□□ 0.2
VPS29-206ENST00000549578 HOXD3P31249 432 aaPredicted RBP16.29■□□□□ 0.2
VPS29-206ENST00000549578 FCGR2BP31994 310 aaPredicted RBP16.29■□□□□ 0.2
VPS29-206ENST00000549578 GPX4P36969 197 aaPredicted RBP16.29■□□□□ 0.2
VPS29-206ENST00000549578 P2RY1P47900 373 aa16.29■□□□□ 0.2
VPS29-206ENST00000549578 NPBWR1P48145 328 aa16.29■□□□□ 0.2
VPS29-206ENST00000549578 ACOT7LQ6ZUV0 252 aa16.29■□□□□ 0.2
VPS29-206ENST00000549578 OR4X1Q8NH49 305 aa16.29■□□□□ 0.2
VPS29-206ENST00000549578 THAP6Q8TBB0 222 aa16.29■□□□□ 0.2
VPS29-206ENST00000549578 BSCL2Q96G97 398 aaPredicted RBP16.29■□□□□ 0.2
VPS29-206ENST00000549578 CHRDL1Q9BU40 450 aa16.29■□□□□ 0.2
VPS29-206ENST00000549578 GAMTQ14353 236 aa16.28■□□□□ 0.2
VPS29-206ENST00000549578 OR10P1Q8NGE3 313 aa16.28■□□□□ 0.2
VPS29-206ENST00000549578 CACNG8Q8WXS5 425 aa16.28■□□□□ 0.2
VPS29-206ENST00000549578 DCUN1D4Q92564 292 aa16.28■□□□□ 0.2
VPS29-206ENST00000549578 NPIPB3Q92617 1050 aa16.28■□□□□ 0.2
VPS29-206ENST00000549578 SLC35E1Q96K37 410 aa16.28■□□□□ 0.2
VPS29-206ENST00000549578 ATP6V0BQ99437 205 aa16.28■□□□□ 0.2
VPS29-206ENST00000549578 IGHV3-35A0A0C4DH35 117 aa16.27■□□□□ 0.2
VPS29-206ENST00000549578 GGCTO75223 188 aaKnown RBP16.27■□□□□ 0.2
VPS29-206ENST00000549578 CLN5O75503 358 aa16.27■□□□□ 0.2
VPS29-206ENST00000549578 OR2C1O95371 312 aa16.27■□□□□ 0.2
VPS29-206ENST00000549578 CTSGP08311 255 aa16.27■□□□□ 0.2
VPS29-206ENST00000549578 LYL1P12980 280 aa16.27■□□□□ 0.2
VPS29-206ENST00000549578 ADMP35318 185 aa16.27■□□□□ 0.2
VPS29-206ENST00000549578 FGL1Q08830 312 aa16.27■□□□□ 0.2
VPS29-206ENST00000549578 RPEL1Q2QD12 228 aa16.27■□□□□ 0.2
VPS29-206ENST00000549578 TMEM217Q8N7C4 229 aa16.27■□□□□ 0.2
VPS29-206ENST00000549578 TMEM116Q8NCL8 245 aa16.27■□□□□ 0.2
VPS29-206ENST00000549578 GAR1Q9NY12 217 aaKnown RBP16.27■□□□□ 0.2
VPS29-206ENST00000549578 G3V3Q6 166 aa16.26■□□□□ 0.19
VPS29-206ENST00000549578 SMLR1H3BR10 107 aa16.26■□□□□ 0.19
VPS29-206ENST00000549578 ZP3P21754 424 aa16.26■□□□□ 0.19
VPS29-206ENST00000549578 SULT1A1P50225 295 aa16.26■□□□□ 0.19
VPS29-206ENST00000549578 STX12Q86Y82 276 aa16.26■□□□□ 0.19
VPS29-206ENST00000549578 NUPL2O15504 423 aaKnown RBP16.25■□□□□ 0.19
VPS29-206ENST00000549578 EWSR1Q01844 656 aaKnown RBP eCLIP16.25■□□□□ 0.19
VPS29-206ENST00000549578 SPSB3Q6PJ21 355 aa16.25■□□□□ 0.19
VPS29-206ENST00000549578 LINC00482Q8N8I6 264 aa16.25■□□□□ 0.19
VPS29-206ENST00000549578 DLX4Q92988 240 aaPredicted RBP16.25■□□□□ 0.19
VPS29-206ENST00000549578 SLC25A31Q9H0C2 315 aa16.25■□□□□ 0.19
VPS29-206ENST00000549578 DLK1P80370 383 aa16.24■□□□□ 0.19
VPS29-206ENST00000549578 NHLH2Q02577 135 aa16.24■□□□□ 0.19
VPS29-206ENST00000549578 SLC38A11Q08AI6 406 aa16.24■□□□□ 0.19
VPS29-206ENST00000549578 SMCO3A2RU48 225 aa16.24■□□□□ 0.19
VPS29-206ENST00000549578 IGLC1P0CG04 106 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms