RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 C5orf30Q96GV9 206 aa10.03□□□□□ -0.8
CDX2-202ENST00000548877 SEC22AQ96IW7 307 aa10.03□□□□□ -0.8
CDX2-202ENST00000548877 TMEM56Q96MV1 263 aa10.03□□□□□ -0.8
CDX2-202ENST00000548877 MFFQ9GZY8 342 aa10.03□□□□□ -0.8
CDX2-202ENST00000548877 ZNF257Q9Y2Q1 563 aa10.03□□□□□ -0.8
CDX2-202ENST00000548877 TMEM56-RWDD3S4R434 201 aa10.03□□□□□ -0.8
CDX2-202ENST00000548877 IGKV1D-13A0A0B4J2D9 117 aa10.02□□□□□ -0.81
CDX2-202ENST00000548877 ARPC5O15511 151 aa10.02□□□□□ -0.81
CDX2-202ENST00000548877 PGLYRP1O75594 196 aaPredicted RBP10.02□□□□□ -0.81
CDX2-202ENST00000548877 ATG12O94817 140 aa10.02□□□□□ -0.81
CDX2-202ENST00000548877 MPC2O95563 127 aa10.02□□□□□ -0.81
CDX2-202ENST00000548877 CDS2O95674 445 aa10.02□□□□□ -0.81
CDX2-202ENST00000548877 SERPINE2P07093 398 aa10.02□□□□□ -0.81
CDX2-202ENST00000548877 HOXB5P09067 269 aa10.02□□□□□ -0.81
CDX2-202ENST00000548877 IGKV1-13P0DP09 117 aa10.02□□□□□ -0.81
CDX2-202ENST00000548877 F2RP25116 425 aa10.02□□□□□ -0.81
CDX2-202ENST00000548877 UCP1P25874 307 aa10.02□□□□□ -0.81
CDX2-202ENST00000548877 PRR20EP86478 221 aa10.02□□□□□ -0.81
CDX2-202ENST00000548877 PRR20CP86479 221 aa10.02□□□□□ -0.81
CDX2-202ENST00000548877 PRR20DP86480 221 aa10.02□□□□□ -0.81
CDX2-202ENST00000548877 PRR20BP86481 221 aa10.02□□□□□ -0.81
CDX2-202ENST00000548877 PRR20AP86496 221 aa10.02□□□□□ -0.81
CDX2-202ENST00000548877 IFITM2Q01629 132 aa10.02□□□□□ -0.81
CDX2-202ENST00000548877 DEFB135Q30KP9 77 aa10.02□□□□□ -0.81
CDX2-202ENST00000548877 FAM106AQ4KMX7 169 aa10.02□□□□□ -0.81
CDX2-202ENST00000548877 Q5BKY6 102 aa10.02□□□□□ -0.81
CDX2-202ENST00000548877 GGNBP1Q5YKI7 109 aa10.02□□□□□ -0.81
CDX2-202ENST00000548877 ACOT7LQ6ZUV0 252 aa10.02□□□□□ -0.81
CDX2-202ENST00000548877 ZNF645Q8N7E2 425 aa10.02□□□□□ -0.81
CDX2-202ENST00000548877 OSR1Q8TAX0 266 aaPredicted RBP10.02□□□□□ -0.81
CDX2-202ENST00000548877 MARC2Q969Z3 335 aa10.02□□□□□ -0.81
CDX2-202ENST00000548877 CCL28Q9NRJ3 127 aa10.02□□□□□ -0.81
CDX2-202ENST00000548877 FAM212BQ9NTI7 297 aaPredicted RBP10.02□□□□□ -0.81
CDX2-202ENST00000548877 BOLA1Q9Y3E2 137 aa10.02□□□□□ -0.81
CDX2-202ENST00000548877 DNAH2Q9P225 4427 aa10.02□□□□□ -0.81
CDX2-202ENST00000548877 DYNC1H1Q14204 4646 aaKnown RBP10.02□□□□□ -0.81
CDX2-202ENST00000548877 TRAV14DV4A0A0A6YYC5 116 aa10.01□□□□□ -0.81
CDX2-202ENST00000548877 ADAP1O75689 374 aa10.01□□□□□ -0.81
CDX2-202ENST00000548877 OR2J3O76001 311 aa10.01□□□□□ -0.81
CDX2-202ENST00000548877 SCAF4O95104 1147 aaKnown RBP10.01□□□□□ -0.81
CDX2-202ENST00000548877 CATR1Q13166 79 aa10.01□□□□□ -0.81
CDX2-202ENST00000548877 OPCMLQ14982 345 aa10.01□□□□□ -0.81
CDX2-202ENST00000548877 THOC7Q6I9Y2 204 aaKnown RBP10.01□□□□□ -0.81
CDX2-202ENST00000548877 PRSS54Q6PEW0 395 aa10.01□□□□□ -0.81
CDX2-202ENST00000548877 TMUB2Q71RG4 321 aa10.01□□□□□ -0.81
CDX2-202ENST00000548877 MMD2Q8IY49 270 aa10.01□□□□□ -0.81
CDX2-202ENST00000548877 OR2C3Q8N628 320 aa10.01□□□□□ -0.81
CDX2-202ENST00000548877 RBPMSQ93062 196 aaKnown RBP10.01□□□□□ -0.81
CDX2-202ENST00000548877 ADTRPQ96IZ2 230 aa10.01□□□□□ -0.81
CDX2-202ENST00000548877 CCDC140Q96MF4 163 aa10.01□□□□□ -0.81
CDX2-202ENST00000548877 OR2D2Q9H210 308 aa10.01□□□□□ -0.81
CDX2-202ENST00000548877 ZNF430Q9H8G1 570 aaPredicted RBP10.01□□□□□ -0.81
CDX2-202ENST00000548877 TNFSF18Q9UNG2 199 aa10.01□□□□□ -0.81
CDX2-202ENST00000548877 KANTRA0A1W2PQU2 76 aa10□□□□□ -0.81
CDX2-202ENST00000548877 NPIPB5A8MRT5 1133 aa10□□□□□ -0.81
CDX2-202ENST00000548877 TSC22D2O75157 780 aa10□□□□□ -0.81
CDX2-202ENST00000548877 MED14OSP0DP75 135 aa10□□□□□ -0.81
CDX2-202ENST00000548877 SLC25A6P12236 298 aa10□□□□□ -0.81
CDX2-202ENST00000548877 DUTP33316 252 aaKnown RBP10□□□□□ -0.81
CDX2-202ENST00000548877 ELLP55199 621 aaPredicted RBP10□□□□□ -0.81
CDX2-202ENST00000548877 SP6Q3SY56 376 aa10□□□□□ -0.81
CDX2-202ENST00000548877 LRRC37A5PQ49AS3 106 aa10□□□□□ -0.81
CDX2-202ENST00000548877 TMEM268Q5VZI3 342 aa10□□□□□ -0.81
CDX2-202ENST00000548877 ZNF66Q6ZN08 573 aa10□□□□□ -0.81
CDX2-202ENST00000548877 LINC00336Q6ZUF6 198 aa10□□□□□ -0.81
CDX2-202ENST00000548877 KCNRGQ8N5I3 272 aa10□□□□□ -0.81
CDX2-202ENST00000548877 STPG3Q8N7X2 389 aa10□□□□□ -0.81
CDX2-202ENST00000548877 OR1L6Q8NGR2 347 aa10□□□□□ -0.81
CDX2-202ENST00000548877 FANCD2OSQ96PS1 177 aa10□□□□□ -0.81
CDX2-202ENST00000548877 TP53RKQ96S44 253 aa10□□□□□ -0.81
CDX2-202ENST00000548877 SPAG8Q99932 426 aaPredicted RBP10□□□□□ -0.81
CDX2-202ENST00000548877 ARL6Q9H0F7 186 aa10□□□□□ -0.81
CDX2-202ENST00000548877 MRPL27Q9P0M9 148 aaKnown RBP10□□□□□ -0.81
CDX2-202ENST00000548877 GSKIPQ9P0R6 139 aa10□□□□□ -0.81
CDX2-202ENST00000548877 FBXL7Q9UJT9 491 aa10□□□□□ -0.81
CDX2-202ENST00000548877 A0A1B0GVY2 172 aa9.99□□□□□ -0.81
CDX2-202ENST00000548877 TEX22C9J3V5 150 aa9.99□□□□□ -0.81
CDX2-202ENST00000548877 ACTL6BO94805 426 aa9.99□□□□□ -0.81
CDX2-202ENST00000548877 CRYZL1O95825 349 aa9.99□□□□□ -0.81
CDX2-202ENST00000548877 CRYGCP07315 174 aa9.99□□□□□ -0.81
CDX2-202ENST00000548877 CXCL2P19875 107 aa9.99□□□□□ -0.81
CDX2-202ENST00000548877 ARL3P36405 182 aa9.99□□□□□ -0.81
CDX2-202ENST00000548877 IL15RAQ13261 267 aa9.99□□□□□ -0.81
CDX2-202ENST00000548877 TEX261Q6UWH6 196 aa9.99□□□□□ -0.81
CDX2-202ENST00000548877 BTNL8Q6UX41 500 aa9.99□□□□□ -0.81
CDX2-202ENST00000548877 SLC51BQ86UW2 128 aa9.99□□□□□ -0.81
CDX2-202ENST00000548877 CD300LFQ8TDQ1 290 aa9.99□□□□□ -0.81
CDX2-202ENST00000548877 OR10C1Q96KK4 312 aa9.99□□□□□ -0.81
CDX2-202ENST00000548877 HSD17B10Q99714 261 aaKnown RBP9.99□□□□□ -0.81
CDX2-202ENST00000548877 MBD2Q9UBB5 411 aa9.99□□□□□ -0.81
CDX2-202ENST00000548877 SELENOKQ9Y6D0 94 aa9.99□□□□□ -0.81
CDX2-202ENST00000548877 U3KQ87 197 aa9.99□□□□□ -0.81
CDX2-202ENST00000548877 ABCA13Q86UQ4 5058 aa9.98□□□□□ -0.81
CDX2-202ENST00000548877 DNAH11Q96DT5 4516 aa9.98□□□□□ -0.81
CDX2-202ENST00000548877 ZNF320A2RRD8 509 aa9.98□□□□□ -0.81
CDX2-202ENST00000548877 LINC00473A8K010 186 aa9.98□□□□□ -0.81
CDX2-202ENST00000548877 E5RGE8 158 aa9.98□□□□□ -0.81
CDX2-202ENST00000548877 TSPAN4O14817 238 aa9.98□□□□□ -0.81
CDX2-202ENST00000548877 ST8SIA3O43173 380 aa9.98□□□□□ -0.81
CDX2-202ENST00000548877 SAA1P0DJI8 122 aaPredicted RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms