RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 KRTAP27-1Q3LI81 207 aa11.64□□□□□ -0.55
CACNB3-209ENST00000548860 DMRTA1Q5VZB9 504 aa11.64□□□□□ -0.55
CACNB3-209ENST00000548860 TCF24Q7RTU0 167 aa11.64□□□□□ -0.55
CACNB3-209ENST00000548860 MUC15Q8N387 334 aa11.64□□□□□ -0.55
CACNB3-209ENST00000548860 APCSP02743 223 aa11.64□□□□□ -0.55
CACNB3-209ENST00000548860 LYPD2Q6UXB3 125 aa11.64□□□□□ -0.55
CACNB3-209ENST00000548860 LOC389332A0A1B0GUA5 103 aa11.63□□□□□ -0.55
CACNB3-209ENST00000548860 PROP1O75360 226 aa11.63□□□□□ -0.55
CACNB3-209ENST00000548860 TDRG1Q3Y452 100 aa11.63□□□□□ -0.55
CACNB3-209ENST00000548860 C2CD3Q4AC94 2353 aa11.63□□□□□ -0.55
CACNB3-209ENST00000548860 NOL4LQ96MY1 436 aaPredicted RBP11.63□□□□□ -0.55
CACNB3-209ENST00000548860 FBXL15Q9H469 300 aa11.63□□□□□ -0.55
CACNB3-209ENST00000548860 DNAJC4Q9NNZ3 241 aa11.63□□□□□ -0.55
CACNB3-209ENST00000548860 TRBV6-6A0A0A6YYG2 114 aa11.63□□□□□ -0.55
CACNB3-209ENST00000548860 SRRM4A7MD48 611 aaKnown RBP11.63□□□□□ -0.55
CACNB3-209ENST00000548860 IGKV3-15P01624 115 aa11.63□□□□□ -0.55
CACNB3-209ENST00000548860 CT45A6P0DMU7 189 aa11.63□□□□□ -0.55
CACNB3-209ENST00000548860 CT45A5P0DMU8 189 aa11.63□□□□□ -0.55
CACNB3-209ENST00000548860 CT45A7P0DMV0 189 aa11.63□□□□□ -0.55
CACNB3-209ENST00000548860 Q8NFD4 153 aa11.63□□□□□ -0.55
CACNB3-209ENST00000548860 GP6Q9HCN6 339 aa11.63□□□□□ -0.55
CACNB3-209ENST00000548860 TNFRSF19Q9NS68 423 aa11.63□□□□□ -0.55
CACNB3-209ENST00000548860 TBL2Q9Y4P3 447 aaKnown RBP11.63□□□□□ -0.55
CACNB3-209ENST00000548860 C15orf61A6NNL5 157 aa11.63□□□□□ -0.55
CACNB3-209ENST00000548860 C8orf88P0DMB2 117 aa11.63□□□□□ -0.55
CACNB3-209ENST00000548860 CCKARP32238 428 aa11.63□□□□□ -0.55
CACNB3-209ENST00000548860 MMDQ15546 238 aa11.63□□□□□ -0.55
CACNB3-209ENST00000548860 TMEM183BQ1AE95 376 aa11.63□□□□□ -0.55
CACNB3-209ENST00000548860 LINC00305Q7Z4B0 112 aa11.63□□□□□ -0.55
CACNB3-209ENST00000548860 DMXL1Q9Y485 3027 aa11.62□□□□□ -0.55
CACNB3-209ENST00000548860 TRAV8-1A0A0A6YYK1 113 aa11.62□□□□□ -0.55
CACNB3-209ENST00000548860 MPDU1O75352 247 aa11.62□□□□□ -0.55
CACNB3-209ENST00000548860 CRYABP02511 175 aaKnown RBP11.62□□□□□ -0.55
CACNB3-209ENST00000548860 CDKN1AP38936 164 aa11.62□□□□□ -0.55
CACNB3-209ENST00000548860 PRR30Q53SZ7 412 aaPredicted RBP11.62□□□□□ -0.55
CACNB3-209ENST00000548860 Q8TCH9 128 aa11.62□□□□□ -0.55
CACNB3-209ENST00000548860 SLC25A15Q9Y619 301 aa11.62□□□□□ -0.55
CACNB3-209ENST00000548860 MYO9AB2RTY4 2548 aa11.62□□□□□ -0.55
CACNB3-209ENST00000548860 USP9YO00507 2555 aaPredicted RBP11.62□□□□□ -0.55
CACNB3-209ENST00000548860 TRBV20OR9-2A0A075B6H5 130 aa11.62□□□□□ -0.55
CACNB3-209ENST00000548860 IGHV3-49A0A0A0MS15 119 aa11.62□□□□□ -0.55
CACNB3-209ENST00000548860 CGB1A6NKQ9 187 aa11.62□□□□□ -0.55
CACNB3-209ENST00000548860 KLF17Q5JT82 389 aaPredicted RBP11.62□□□□□ -0.55
CACNB3-209ENST00000548860 C22orf34Q6ZV56 151 aa11.62□□□□□ -0.55
CACNB3-209ENST00000548860 COL4A2P08572 1712 aa11.62□□□□□ -0.55
CACNB3-209ENST00000548860 STAG3L2P0CL84 134 aa11.62□□□□□ -0.55
CACNB3-209ENST00000548860 STAG3L3P0CL85 134 aa11.62□□□□□ -0.55
CACNB3-209ENST00000548860 COL8A1P27658 744 aa11.62□□□□□ -0.55
CACNB3-209ENST00000548860 SORL1Q92673 2214 aa11.61□□□□□ -0.55
CACNB3-209ENST00000548860 TIMM23BQ5SRD1 257 aa11.61□□□□□ -0.55
CACNB3-209ENST00000548860 DMRTC2Q8IXT2 367 aaPredicted RBP11.61□□□□□ -0.55
CACNB3-209ENST00000548860 TEX50A0A1B0GTY4 177 aa11.61□□□□□ -0.55
CACNB3-209ENST00000548860 YPEL1O60688 119 aa11.61□□□□□ -0.55
CACNB3-209ENST00000548860 SRSF7Q16629 238 aaKnown RBP eCLIP11.61□□□□□ -0.55
CACNB3-209ENST00000548860 ADTRPQ96IZ2 230 aa11.61□□□□□ -0.55
CACNB3-209ENST00000548860 YPEL2Q96QA6 119 aa11.61□□□□□ -0.55
CACNB3-209ENST00000548860 RNF2Q99496 336 aa11.61□□□□□ -0.55
CACNB3-209ENST00000548860 ZNF883P0CG24 379 aa11.61□□□□□ -0.55
CACNB3-209ENST00000548860 BRS3P32247 399 aa11.61□□□□□ -0.55
CACNB3-209ENST00000548860 SSBP2P81877 361 aaPredicted RBP11.61□□□□□ -0.55
CACNB3-209ENST00000548860 TNFSF13O75888 250 aa11.6□□□□□ -0.55
CACNB3-209ENST00000548860 GCGP01275 180 aa11.6□□□□□ -0.55
CACNB3-209ENST00000548860 KIR2DS2P43631 304 aa11.6□□□□□ -0.55
CACNB3-209ENST00000548860 C1orf229Q6ZS94 237 aaPredicted RBP11.6□□□□□ -0.55
CACNB3-209ENST00000548860 SSX8Q7RTT4 187 aa11.6□□□□□ -0.55
CACNB3-209ENST00000548860 OR5R1Q8NH85 324 aa11.6□□□□□ -0.55
CACNB3-209ENST00000548860 ELOVL5Q9NYP7 299 aa11.6□□□□□ -0.55
CACNB3-209ENST00000548860 IL36BQ9NZH7 164 aa11.6□□□□□ -0.55
CACNB3-209ENST00000548860 WNT2P09544 360 aa11.6□□□□□ -0.55
CACNB3-209ENST00000548860 ZNF138P52744 262 aa11.6□□□□□ -0.55
CACNB3-209ENST00000548860 SPATA45Q537H7 98 aa11.6□□□□□ -0.55
CACNB3-209ENST00000548860 TPSG1Q9NRR2 321 aa11.6□□□□□ -0.55
CACNB3-209ENST00000548860 KALRNO60229 2985 aa11.6□□□□□ -0.55
CACNB3-209ENST00000548860 C15orf65H3BRN8 121 aa11.6□□□□□ -0.55
CACNB3-209ENST00000548860 TCF21O43680 179 aa11.6□□□□□ -0.55
CACNB3-209ENST00000548860 SLC25A33Q9BSK2 321 aa11.6□□□□□ -0.55
CACNB3-209ENST00000548860 NGBQ9NPG2 151 aa11.6□□□□□ -0.55
CACNB3-209ENST00000548860 HSBP1L1C9JCN9 74 aa11.59□□□□□ -0.55
CACNB3-209ENST00000548860 VENTXO95231 258 aa11.59□□□□□ -0.55
CACNB3-209ENST00000548860 TDGF1P13385 188 aa11.59□□□□□ -0.55
CACNB3-209ENST00000548860 BTF3P20290 206 aaKnown RBP11.59□□□□□ -0.55
CACNB3-209ENST00000548860 SFTPCP11686 197 aa11.59□□□□□ -0.55
CACNB3-209ENST00000548860 RPL27AP46776 148 aaKnown RBP11.59□□□□□ -0.55
CACNB3-209ENST00000548860 RPL11P62913 178 aaKnown RBP11.59□□□□□ -0.55
CACNB3-209ENST00000548860 GOLT1AQ6ZVE7 132 aa11.59□□□□□ -0.55
CACNB3-209ENST00000548860 RNF24Q9Y225 148 aa11.59□□□□□ -0.55
CACNB3-209ENST00000548860 TNRC6AQ8NDV7 1962 aaKnown RBP11.59□□□□□ -0.55
CACNB3-209ENST00000548860 HTR1DP28221 377 aa11.59□□□□□ -0.55
CACNB3-209ENST00000548860 VAMP3Q15836 100 aa11.59□□□□□ -0.55
CACNB3-209ENST00000548860 TMEM177Q53S58 311 aa11.59□□□□□ -0.55
CACNB3-209ENST00000548860 MORN5Q5VZ52 161 aa11.59□□□□□ -0.55
CACNB3-209ENST00000548860 WFDC3Q8IUB2 231 aa11.59□□□□□ -0.55
CACNB3-209ENST00000548860 PLSCR4Q9NRQ2 329 aa11.59□□□□□ -0.55
CACNB3-209ENST00000548860 WNK1Q9H4A3 2382 aa11.59□□□□□ -0.55
CACNB3-209ENST00000548860 IGHV3-66A0A0C4DH42 116 aa11.58□□□□□ -0.55
CACNB3-209ENST00000548860 A0A1W2PN81 502 aa11.58□□□□□ -0.55
CACNB3-209ENST00000548860 SH2D7A6NKC9 451 aaPredicted RBP11.58□□□□□ -0.55
CACNB3-209ENST00000548860 P01737 135 aa11.58□□□□□ -0.55
CACNB3-209ENST00000548860 LMO1P25800 156 aa11.58□□□□□ -0.55
CACNB3-209ENST00000548860 CNTFRP26992 372 aa11.58□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms