RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 TRAV2A0A0B4J234 112 aa12.75□□□□□ -0.37
CHMP1A-205ENST00000548650 DFFBO76075 338 aa12.75□□□□□ -0.37
CHMP1A-205ENST00000548650 TMEM50AO95807 157 aa12.75□□□□□ -0.37
CHMP1A-205ENST00000548650 ETV6P41212 452 aa12.75□□□□□ -0.37
CHMP1A-205ENST00000548650 TAS2R19P59542 299 aa12.75□□□□□ -0.37
CHMP1A-205ENST00000548650 PAFAH1B2P68402 229 aa12.75□□□□□ -0.37
CHMP1A-205ENST00000548650 SCGB2B2Q4G0G5 96 aa12.75□□□□□ -0.37
CHMP1A-205ENST00000548650 AARDQ4LEZ3 155 aa12.75□□□□□ -0.37
CHMP1A-205ENST00000548650 FAM24BQ8N5W8 94 aa12.75□□□□□ -0.37
CHMP1A-205ENST00000548650 ZFAND1Q8TCF1 268 aa12.75□□□□□ -0.37
CHMP1A-205ENST00000548650 MARCH1Q8TCQ1 289 aa12.75□□□□□ -0.37
CHMP1A-205ENST00000548650 C15orf40Q8WUR7 153 aa12.75□□□□□ -0.37
CHMP1A-205ENST00000548650 C11orf68Q9H3H3 251 aaKnown RBP12.75□□□□□ -0.37
CHMP1A-205ENST00000548650 KLK5Q9Y337 293 aaPredicted RBP12.75□□□□□ -0.37
CHMP1A-205ENST00000548650 AGRNO00468 2067 aa12.74□□□□□ -0.37
CHMP1A-205ENST00000548650 FRAS1Q86XX4 4008 aa12.74□□□□□ -0.37
CHMP1A-205ENST00000548650 GABARAPH6UMI1 98 aa12.74□□□□□ -0.37
CHMP1A-205ENST00000548650 CLN5O75503 358 aa12.74□□□□□ -0.37
CHMP1A-205ENST00000548650 B3GALNT1O75752 331 aa12.74□□□□□ -0.37
CHMP1A-205ENST00000548650 RAB3DO95716 219 aa12.74□□□□□ -0.37
CHMP1A-205ENST00000548650 OPRK1P41145 380 aa12.74□□□□□ -0.37
CHMP1A-205ENST00000548650 FAAP20Q6NZ36 180 aa12.74□□□□□ -0.37
CHMP1A-205ENST00000548650 STEAP1BQ6NZ63 245 aa12.74□□□□□ -0.37
CHMP1A-205ENST00000548650 Q6ZRM9 215 aa12.74□□□□□ -0.37
CHMP1A-205ENST00000548650 LHFPL5Q8TAF8 219 aa12.74□□□□□ -0.37
CHMP1A-205ENST00000548650 PHLDA1Q8WV24 401 aaPredicted RBP12.74□□□□□ -0.37
CHMP1A-205ENST00000548650 RRNAD1Q96FB5 475 aaKnown RBP12.74□□□□□ -0.37
CHMP1A-205ENST00000548650 TMEM222Q9H0R3 208 aa12.74□□□□□ -0.37
CHMP1A-205ENST00000548650 CA1P00915 261 aaPredicted RBP12.73□□□□□ -0.37
CHMP1A-205ENST00000548650 OR5AC1P0C628 307 aa12.73□□□□□ -0.37
CHMP1A-205ENST00000548650 SUB1P53999 127 aaKnown RBP eCLIP12.73□□□□□ -0.37
CHMP1A-205ENST00000548650 DEFB131AP59861 70 aa12.73□□□□□ -0.37
CHMP1A-205ENST00000548650 SPCS2Q15005 226 aa12.73□□□□□ -0.37
CHMP1A-205ENST00000548650 LEMD1Q68G75 181 aa12.73□□□□□ -0.37
CHMP1A-205ENST00000548650 OR4X1Q8NH49 305 aa12.73□□□□□ -0.37
CHMP1A-205ENST00000548650 RNASE11Q8TAA1 199 aaKnown RBP12.73□□□□□ -0.37
CHMP1A-205ENST00000548650 RARRES2Q99969 163 aa12.73□□□□□ -0.37
CHMP1A-205ENST00000548650 TMEM231Q9H6L2 316 aa12.73□□□□□ -0.37
CHMP1A-205ENST00000548650 ENY2Q9NPA8 101 aa12.73□□□□□ -0.37
CHMP1A-205ENST00000548650 CDS2O95674 445 aa12.72□□□□□ -0.37
CHMP1A-205ENST00000548650 IGKV1-17P01599 117 aa12.72□□□□□ -0.37
CHMP1A-205ENST00000548650 RPL5P46777 297 aaKnown RBP12.72□□□□□ -0.37
CHMP1A-205ENST00000548650 SSBP1Q04837 148 aaKnown RBP12.72□□□□□ -0.37
CHMP1A-205ENST00000548650 FAM219AQ8IW50 185 aa12.72□□□□□ -0.37
CHMP1A-205ENST00000548650 OR11H2Q8NH07 326 aa12.72□□□□□ -0.37
CHMP1A-205ENST00000548650 SMIM4Q8WVI0 70 aa12.72□□□□□ -0.37
CHMP1A-205ENST00000548650 NAA60Q9H7X0 242 aa12.72□□□□□ -0.37
CHMP1A-205ENST00000548650 DNASE2O00115 360 aaPredicted RBP12.71□□□□□ -0.37
CHMP1A-205ENST00000548650 CRYBB3P26998 211 aa12.71□□□□□ -0.37
CHMP1A-205ENST00000548650 SPCS3P61009 180 aa12.71□□□□□ -0.37
CHMP1A-205ENST00000548650 RPL11P62913 178 aaKnown RBP12.71□□□□□ -0.37
CHMP1A-205ENST00000548650 MRPS10P82664 201 aaKnown RBP12.71□□□□□ -0.37
CHMP1A-205ENST00000548650 MEF2DQ14814 521 aa12.71□□□□□ -0.37
CHMP1A-205ENST00000548650 MLANAQ16655 118 aa12.71□□□□□ -0.37
CHMP1A-205ENST00000548650 OR52E5Q8NH55 327 aa12.71□□□□□ -0.37
CHMP1A-205ENST00000548650 GLYATL2Q8WU03 294 aa12.71□□□□□ -0.37
CHMP1A-205ENST00000548650 METTL26Q96S19 204 aa12.71□□□□□ -0.37
CHMP1A-205ENST00000548650 RTBDNQ9BSG5 229 aaPredicted RBP12.71□□□□□ -0.37
CHMP1A-205ENST00000548650 RABAC1Q9UI14 185 aa12.71□□□□□ -0.37
CHMP1A-205ENST00000548650 C14orf166Q9Y224 244 aaKnown RBP12.71□□□□□ -0.37
CHMP1A-205ENST00000548650 K7EQG2 157 aa12.7□□□□□ -0.38
CHMP1A-205ENST00000548650 RGS5O15539 181 aa12.7□□□□□ -0.38
CHMP1A-205ENST00000548650 NPPCP23582 126 aa12.7□□□□□ -0.38
CHMP1A-205ENST00000548650 P2RY1P47900 373 aa12.7□□□□□ -0.38
CHMP1A-205ENST00000548650 NANOS2P60321 138 aaKnown RBP12.7□□□□□ -0.38
CHMP1A-205ENST00000548650 SURF2Q15527 256 aaPredicted RBP12.7□□□□□ -0.38
CHMP1A-205ENST00000548650 TIGITQ495A1 244 aa12.7□□□□□ -0.38
CHMP1A-205ENST00000548650 STXBP6Q8NFX7 210 aa12.7□□□□□ -0.38
CHMP1A-205ENST00000548650 RAB2BQ8WUD1 216 aa12.7□□□□□ -0.38
CHMP1A-205ENST00000548650 RBPMSQ93062 196 aaKnown RBP12.7□□□□□ -0.38
CHMP1A-205ENST00000548650 CACNG5Q9UF02 275 aa12.7□□□□□ -0.38
CHMP1A-205ENST00000548650 A0A1W2PS18 150 aa12.69□□□□□ -0.38
CHMP1A-205ENST00000548650 CTDSP2O14595 271 aa12.69□□□□□ -0.38
CHMP1A-205ENST00000548650 SCGB2A1O75556 95 aa12.69□□□□□ -0.38
CHMP1A-205ENST00000548650 IGLC1P0CG04 106 aa12.69□□□□□ -0.38
CHMP1A-205ENST00000548650 HTR2BP41595 481 aa12.69□□□□□ -0.38
CHMP1A-205ENST00000548650 TMBIM6P55061 237 aa12.69□□□□□ -0.38
CHMP1A-205ENST00000548650 TMEM187Q14656 261 aa12.69□□□□□ -0.38
CHMP1A-205ENST00000548650 TRPT1Q86TN4 253 aaKnown RBP12.69□□□□□ -0.38
CHMP1A-205ENST00000548650 SELENOHQ8IZQ5 122 aaKnown RBP12.69□□□□□ -0.38
CHMP1A-205ENST00000548650 RPP25LQ8N5L8 163 aaKnown RBP12.69□□□□□ -0.38
CHMP1A-205ENST00000548650 OR4C16Q8NGL9 310 aa12.69□□□□□ -0.38
CHMP1A-205ENST00000548650 DCANP1Q8TF63 244 aa12.69□□□□□ -0.38
CHMP1A-205ENST00000548650 TMEM170AQ8WVE7 144 aa12.69□□□□□ -0.38
CHMP1A-205ENST00000548650 GRAMD2BQ96HH9 432 aa12.69□□□□□ -0.38
CHMP1A-205ENST00000548650 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.69□□□□□ -0.38
CHMP1A-205ENST00000548650 TEX13DA0A0J9YY54 714 aaPredicted RBP12.68□□□□□ -0.38
CHMP1A-205ENST00000548650 RPS10-NUDT3A0A1W2PQS6 291 aa12.68□□□□□ -0.38
CHMP1A-205ENST00000548650 CRYM-AS1A6NIL9 109 aa12.68□□□□□ -0.38
CHMP1A-205ENST00000548650 DEFB4AO15263 64 aa12.68□□□□□ -0.38
CHMP1A-205ENST00000548650 GIG44P09565 113 aaPredicted RBP12.68□□□□□ -0.38
CHMP1A-205ENST00000548650 PRSS54Q6PEW0 395 aa12.68□□□□□ -0.38
CHMP1A-205ENST00000548650 SLC24A4Q8NFF2 622 aa12.68□□□□□ -0.38
CHMP1A-205ENST00000548650 C11orf45Q8TAV5 145 aa12.68□□□□□ -0.38
CHMP1A-205ENST00000548650 MFFQ9GZY8 342 aa12.68□□□□□ -0.38
CHMP1A-205ENST00000548650 TRAV30A0A087WSZ9 112 aa12.67□□□□□ -0.38
CHMP1A-205ENST00000548650 DISC1C4P0D8 188 aa12.67□□□□□ -0.38
CHMP1A-205ENST00000548650 NOL3O60936 208 aaKnown RBP12.67□□□□□ -0.38
CHMP1A-205ENST00000548650 ZNF688P0C7X2 276 aa12.67□□□□□ -0.38
CHMP1A-205ENST00000548650 AKAIN1P0CW23 69 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms