RNA–Protein interactions for RNA: ENST00000548097.5

KRT4-201, Transcript of keratin 4, humanhuman

TSL 1 (best)

Gene KRT4, Length 1,839 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4-201ENST00000548097 FAM223AQ8IWN6 122 aa13.27□□□□□ -0.28
KRT4-201ENST00000548097 RNASEH2CQ8TDP1 164 aaKnown RBP13.27□□□□□ -0.28
KRT4-201ENST00000548097 CCDC140Q96MF4 163 aa13.27□□□□□ -0.28
KRT4-201ENST00000548097 SMIM3Q9BZL3 60 aa13.27□□□□□ -0.28
KRT4-201ENST00000548097 KLK9Q9UKQ9 250 aa13.27□□□□□ -0.28
KRT4-201ENST00000548097 COL6A5A8TX70 2615 aa13.27□□□□□ -0.28
KRT4-201ENST00000548097 CORTO00230 105 aa13.27□□□□□ -0.29
KRT4-201ENST00000548097 BRI3O95415 125 aa13.27□□□□□ -0.29
KRT4-201ENST00000548097 SULT1A1P50225 295 aa13.27□□□□□ -0.29
KRT4-201ENST00000548097 NSUN5P1Q3KNT7 163 aa13.27□□□□□ -0.29
KRT4-201ENST00000548097 ACSM6Q6P461 480 aa13.27□□□□□ -0.29
KRT4-201ENST00000548097 CLEC19AQ6UXS0 136 aa13.27□□□□□ -0.29
KRT4-201ENST00000548097 SLC16A13Q7RTY0 426 aa13.27□□□□□ -0.29
KRT4-201ENST00000548097 NOXA1Q86UR1 476 aa13.27□□□□□ -0.29
KRT4-201ENST00000548097 KLHL30-AS1Q8NEE0 82 aa13.27□□□□□ -0.29
KRT4-201ENST00000548097 OR10P1Q8NGE3 313 aa13.27□□□□□ -0.29
KRT4-201ENST00000548097 ACY3Q96HD9 319 aa13.27□□□□□ -0.29
KRT4-201ENST00000548097 TNFSF18Q9UNG2 199 aa13.27□□□□□ -0.29
KRT4-201ENST00000548097 RNF222A6NCQ9 220 aa13.26□□□□□ -0.29
KRT4-201ENST00000548097 F8W735 103 aaPredicted RBP13.26□□□□□ -0.29
KRT4-201ENST00000548097 STX12Q86Y82 276 aa13.26□□□□□ -0.29
KRT4-201ENST00000548097 C21orf62Q9NYP8 219 aa13.26□□□□□ -0.29
KRT4-201ENST00000548097 SMCO3A2RU48 225 aa13.25□□□□□ -0.29
KRT4-201ENST00000548097 OR2T8A6NH00 312 aa13.25□□□□□ -0.29
KRT4-201ENST00000548097 PPP5D1E7EU14 171 aa13.25□□□□□ -0.29
KRT4-201ENST00000548097 GPR183P32249 361 aa13.25□□□□□ -0.29
KRT4-201ENST00000548097 RND2P52198 227 aa13.25□□□□□ -0.29
KRT4-201ENST00000548097 SLC38A11Q08AI6 406 aa13.25□□□□□ -0.29
KRT4-201ENST00000548097 GAMTQ14353 236 aa13.25□□□□□ -0.29
KRT4-201ENST00000548097 CLINT1Q14677 625 aa13.25□□□□□ -0.29
KRT4-201ENST00000548097 Q56UQ5 140 aa13.25□□□□□ -0.29
KRT4-201ENST00000548097 C12orf54Q6X4T0 127 aa13.25□□□□□ -0.29
KRT4-201ENST00000548097 C8orf86Q6ZUL3 223 aa13.25□□□□□ -0.29
KRT4-201ENST00000548097 OR5C1Q8NGR4 320 aa13.25□□□□□ -0.29
KRT4-201ENST00000548097 ZNF502Q8TBZ5 544 aa13.25□□□□□ -0.29
KRT4-201ENST00000548097 NPIPB3Q92617 1050 aa13.25□□□□□ -0.29
KRT4-201ENST00000548097 EEF1AKMT3Q96AZ1 226 aa13.25□□□□□ -0.29
KRT4-201ENST00000548097 USMG5Q96IX5 58 aa13.25□□□□□ -0.29
KRT4-201ENST00000548097 UBE2E2Q96LR5 201 aa13.25□□□□□ -0.29
KRT4-201ENST00000548097 SLC25A31Q9H0C2 315 aa13.25□□□□□ -0.29
KRT4-201ENST00000548097 A0A0G2JLM5 398 aa13.25□□□□□ -0.29
KRT4-201ENST00000548097 ADARB2-AS1A8MUL3 147 aa13.25□□□□□ -0.29
KRT4-201ENST00000548097 NUDT19A8MXV4 375 aa13.25□□□□□ -0.29
KRT4-201ENST00000548097 CLEC3BP05452 202 aa13.25□□□□□ -0.29
KRT4-201ENST00000548097 NKX2-5P52952 324 aaPredicted RBP13.25□□□□□ -0.29
KRT4-201ENST00000548097 ATP5IP56385 69 aaPredicted RBP13.25□□□□□ -0.29
KRT4-201ENST00000548097 CXorf58Q96LI9 332 aa13.25□□□□□ -0.29
KRT4-201ENST00000548097 CITED1Q99966 193 aa13.25□□□□□ -0.29
KRT4-201ENST00000548097 TSSC4Q9Y5U2 329 aaPredicted RBP13.25□□□□□ -0.29
KRT4-201ENST00000548097 IGHV3-35A0A0C4DH35 117 aa13.24□□□□□ -0.29
KRT4-201ENST00000548097 C1QBP02746 253 aa13.24□□□□□ -0.29
KRT4-201ENST00000548097 CDX1P47902 265 aaPredicted RBP13.24□□□□□ -0.29
KRT4-201ENST00000548097 EIF2B2P49770 351 aaKnown RBP13.24□□□□□ -0.29
KRT4-201ENST00000548097 RIPPLY3P57055 190 aa13.24□□□□□ -0.29
KRT4-201ENST00000548097 LILRB2Q8N423 598 aa13.24□□□□□ -0.29
KRT4-201ENST00000548097 C3orf56Q8N813 242 aa13.24□□□□□ -0.29
KRT4-201ENST00000548097 INO80EQ8NBZ0 244 aaPredicted RBP13.24□□□□□ -0.29
KRT4-201ENST00000548097 VN1R17PQ8TDU5 208 aa13.24□□□□□ -0.29
KRT4-201ENST00000548097 HSPB11Q9Y547 144 aa13.24□□□□□ -0.29
KRT4-201ENST00000548097 RPS10-NUDT3A0A1W2PQS6 291 aa13.23□□□□□ -0.29
KRT4-201ENST00000548097 MFAP4P55083 255 aa13.23□□□□□ -0.29
KRT4-201ENST00000548097 ZNF343Q6P1L6 599 aa13.23□□□□□ -0.29
KRT4-201ENST00000548097 AQP10Q96PS8 301 aa13.23□□□□□ -0.29
KRT4-201ENST00000548097 MFFQ9GZY8 342 aa13.23□□□□□ -0.29
KRT4-201ENST00000548097 WFDC1Q9HC57 220 aa13.23□□□□□ -0.29
KRT4-201ENST00000548097 STAB1Q9NY15 2570 aa13.23□□□□□ -0.29
KRT4-201ENST00000548097 I3L521 148 aa13.23□□□□□ -0.29
KRT4-201ENST00000548097 LGALS1P09382 135 aaKnown RBP13.23□□□□□ -0.29
KRT4-201ENST00000548097 CXCL2P19875 107 aa13.23□□□□□ -0.29
KRT4-201ENST00000548097 GPX4P36969 197 aaPredicted RBP13.23□□□□□ -0.29
KRT4-201ENST00000548097 NUP62P37198 522 aaPredicted RBP13.23□□□□□ -0.29
KRT4-201ENST00000548097 ZFP69Q49AA0 526 aa13.23□□□□□ -0.29
KRT4-201ENST00000548097 SLC35E1Q96K37 410 aa13.23□□□□□ -0.29
KRT4-201ENST00000548097 CHRDL1Q9BU40 450 aa13.23□□□□□ -0.29
KRT4-201ENST00000548097 IGHV4OR15-8A0A075B7B6 117 aa13.22□□□□□ -0.29
KRT4-201ENST00000548097 IGKV1OR2-108A0A075B7D4 117 aa13.22□□□□□ -0.29
KRT4-201ENST00000548097 A0A087WW49 117 aa13.22□□□□□ -0.29
KRT4-201ENST00000548097 TRBV7-1A0A0A6YYK4 115 aa13.22□□□□□ -0.29
KRT4-201ENST00000548097 GNG7O60262 68 aa13.22□□□□□ -0.29
KRT4-201ENST00000548097 AKR1C1Q04828 323 aa13.22□□□□□ -0.29
KRT4-201ENST00000548097 ETFRF1Q6IPR1 90 aa13.22□□□□□ -0.29
KRT4-201ENST00000548097 OR1S2Q8NGQ3 325 aa13.22□□□□□ -0.29
KRT4-201ENST00000548097 C4orf3Q8WVX3 66 aa13.22□□□□□ -0.29
KRT4-201ENST00000548097 FBXL17Q9UF56 701 aa13.22□□□□□ -0.29
KRT4-201ENST00000548097 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.21□□□□□ -0.29
KRT4-201ENST00000548097 UBE2L5PA0A1B0GUS4 154 aa13.21□□□□□ -0.29
KRT4-201ENST00000548097 S100A11P31949 105 aa13.21□□□□□ -0.29
KRT4-201ENST00000548097 HBG1P69891 147 aa13.21□□□□□ -0.29
KRT4-201ENST00000548097 HBG2P69892 147 aa13.21□□□□□ -0.29
KRT4-201ENST00000548097 DLK1P80370 383 aa13.21□□□□□ -0.29
KRT4-201ENST00000548097 BAXQ07812 192 aa13.21□□□□□ -0.29
KRT4-201ENST00000548097 OR11H1Q8NG94 326 aa13.21□□□□□ -0.29
KRT4-201ENST00000548097 OR4X1Q8NH49 305 aa13.21□□□□□ -0.29
KRT4-201ENST00000548097 CACNG8Q8WXS5 425 aa13.21□□□□□ -0.29
KRT4-201ENST00000548097 ZNF747Q9BV97 191 aa13.21□□□□□ -0.29
KRT4-201ENST00000548097 PEF1Q9UBV8 284 aaKnown RBP13.21□□□□□ -0.29
KRT4-201ENST00000548097 CLN5O75503 358 aa13.2□□□□□ -0.3
KRT4-201ENST00000548097 ADMP35318 185 aa13.2□□□□□ -0.3
KRT4-201ENST00000548097 ARL3P36405 182 aa13.2□□□□□ -0.3
KRT4-201ENST00000548097 TIGITQ495A1 244 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms