RNA–Protein interactions for RNA: ENST00000547372.5

RBFOX1-208, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-208ENST00000547372 ZNF784Q8NCA9 323 aaPredicted RBP9.86□□□□□ -0.83
RBFOX1-208ENST00000547372 RAB1CQ92928 201 aa9.86□□□□□ -0.83
RBFOX1-208ENST00000547372 S1PR3Q99500 378 aa9.86□□□□□ -0.83
RBFOX1-208ENST00000547372 SH2D2AQ9NP31 389 aa9.86□□□□□ -0.83
RBFOX1-208ENST00000547372 FZR1Q9UM11 496 aa9.86□□□□□ -0.83
RBFOX1-208ENST00000547372 PTPRZ1P23471 2315 aaPredicted RBP9.86□□□□□ -0.83
RBFOX1-208ENST00000547372 OR2H2O95918 312 aa9.85□□□□□ -0.83
RBFOX1-208ENST00000547372 COX8AP10176 69 aa9.85□□□□□ -0.83
RBFOX1-208ENST00000547372 SNRNP40Q96DI7 357 aaKnown RBP9.85□□□□□ -0.83
RBFOX1-208ENST00000547372 MBNL3Q9NUK0 354 aaKnown RBP9.85□□□□□ -0.83
RBFOX1-208ENST00000547372 NBASA2RRP1 2371 aa9.85□□□□□ -0.83
RBFOX1-208ENST00000547372 TRAV24A0A0B4J272 114 aa9.85□□□□□ -0.83
RBFOX1-208ENST00000547372 KBTBD11-OT1A0A1B0GTJ5 212 aa9.85□□□□□ -0.83
RBFOX1-208ENST00000547372 SLC25A17O43808 307 aa9.85□□□□□ -0.83
RBFOX1-208ENST00000547372 INSL3P51460 131 aa9.85□□□□□ -0.83
RBFOX1-208ENST00000547372 FA2HQ7L5A8 372 aa9.85□□□□□ -0.83
RBFOX1-208ENST00000547372 WFDC3Q8IUB2 231 aa9.85□□□□□ -0.83
RBFOX1-208ENST00000547372 C5orf30Q96GV9 206 aa9.85□□□□□ -0.83
RBFOX1-208ENST00000547372 OR2V2Q96R30 315 aa9.85□□□□□ -0.83
RBFOX1-208ENST00000547372 FAM173AQ9BQD7 235 aa9.85□□□□□ -0.83
RBFOX1-208ENST00000547372 TIMM23BQ5SRD1 257 aa9.85□□□□□ -0.83
RBFOX1-208ENST00000547372 TUSC5Q8IXB3 177 aa9.85□□□□□ -0.83
RBFOX1-208ENST00000547372 MRAP2Q96G30 205 aa9.85□□□□□ -0.83
RBFOX1-208ENST00000547372 TMUB1Q9BVT8 246 aa9.85□□□□□ -0.83
RBFOX1-208ENST00000547372 MED13LQ71F56 2210 aa9.84□□□□□ -0.83
RBFOX1-208ENST00000547372 THADAQ6YHU6 1953 aa9.84□□□□□ -0.83
RBFOX1-208ENST00000547372 LOC389332A0A1B0GUA5 103 aa9.84□□□□□ -0.83
RBFOX1-208ENST00000547372 SMIM27A0A1W2PRY6 76 aa9.84□□□□□ -0.83
RBFOX1-208ENST00000547372 TMEM30CPA0ZSE6 113 aa9.84□□□□□ -0.83
RBFOX1-208ENST00000547372 TFF1P04155 84 aa9.84□□□□□ -0.83
RBFOX1-208ENST00000547372 OPRK1P41145 380 aa9.84□□□□□ -0.83
RBFOX1-208ENST00000547372 ZNF826PQ6ZT77 177 aa9.84□□□□□ -0.83
RBFOX1-208ENST00000547372 URB1-AS1Q96HZ7 61 aa9.84□□□□□ -0.83
RBFOX1-208ENST00000547372 TAAR6Q96RI8 345 aa9.84□□□□□ -0.83
RBFOX1-208ENST00000547372 RALYQ9UKM9 306 aaKnown RBP9.84□□□□□ -0.83
RBFOX1-208ENST00000547372 H3BMG7 143 aa9.84□□□□□ -0.83
RBFOX1-208ENST00000547372 SCGB1A1P11684 91 aa9.84□□□□□ -0.83
RBFOX1-208ENST00000547372 LIFP15018 202 aa9.84□□□□□ -0.83
RBFOX1-208ENST00000547372 HERV-K104P63124 156 aa9.84□□□□□ -0.83
RBFOX1-208ENST00000547372 GUSBP11Q6P575 273 aa9.84□□□□□ -0.83
RBFOX1-208ENST00000547372 LRRC29Q8WV35 223 aa9.84□□□□□ -0.83
RBFOX1-208ENST00000547372 ADTRPQ96IZ2 230 aa9.84□□□□□ -0.83
RBFOX1-208ENST00000547372 TNCP24821 2201 aa9.83□□□□□ -0.84
RBFOX1-208ENST00000547372 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.83□□□□□ -0.84
RBFOX1-208ENST00000547372 B5MCH6 92 aa9.83□□□□□ -0.84
RBFOX1-208ENST00000547372 PLAUP00749 431 aa9.83□□□□□ -0.84
RBFOX1-208ENST00000547372 IGHV3-48P01763 117 aa9.83□□□□□ -0.84
RBFOX1-208ENST00000547372 SMIM13P0DJ93 91 aa9.83□□□□□ -0.84
RBFOX1-208ENST00000547372 SMIM17P0DL12 118 aa9.83□□□□□ -0.84
RBFOX1-208ENST00000547372 FCER1GP30273 86 aa9.83□□□□□ -0.84
RBFOX1-208ENST00000547372 FOLR3P41439 243 aa9.83□□□□□ -0.84
RBFOX1-208ENST00000547372 TAS2R45P59539 299 aa9.83□□□□□ -0.84
RBFOX1-208ENST00000547372 UBE2L3P68036 154 aaKnown RBP9.83□□□□□ -0.84
RBFOX1-208ENST00000547372 C3AR1Q16581 482 aa9.83□□□□□ -0.84
RBFOX1-208ENST00000547372 TMEM249Q2WGJ8 235 aa9.83□□□□□ -0.84
RBFOX1-208ENST00000547372 TEPPQ6URK8 271 aa9.83□□□□□ -0.84
RBFOX1-208ENST00000547372 Q8N7P7 452 aa9.83□□□□□ -0.84
RBFOX1-208ENST00000547372 RBMXL3Q8N7X1 1067 aaKnown RBP9.83□□□□□ -0.84
RBFOX1-208ENST00000547372 NCR2O95944 276 aa9.83□□□□□ -0.84
RBFOX1-208ENST00000547372 LIPFP07098 398 aa9.83□□□□□ -0.84
RBFOX1-208ENST00000547372 RNFT1Q5M7Z0 435 aa9.83□□□□□ -0.84
RBFOX1-208ENST00000547372 SPAG8Q99932 426 aaPredicted RBP9.83□□□□□ -0.84
RBFOX1-208ENST00000547372 TMEM265A0A087WTH1 108 aa9.83□□□□□ -0.84
RBFOX1-208ENST00000547372 TEX50A0A1B0GTY4 177 aa9.83□□□□□ -0.84
RBFOX1-208ENST00000547372 SPINK8P0C7L1 97 aa9.83□□□□□ -0.84
RBFOX1-208ENST00000547372 DEFB108BQ8NET1 73 aa9.83□□□□□ -0.84
RBFOX1-208ENST00000547372 C1RLQ9NZP8 487 aa9.83□□□□□ -0.84
RBFOX1-208ENST00000547372 TIMM8AO60220 97 aaPredicted RBP9.82□□□□□ -0.84
RBFOX1-208ENST00000547372 CYB561P49447 251 aa9.82□□□□□ -0.84
RBFOX1-208ENST00000547372 ALKBH6Q3KRA9 238 aa9.82□□□□□ -0.84
RBFOX1-208ENST00000547372 LCNL1Q6ZST4 164 aa9.82□□□□□ -0.84
RBFOX1-208ENST00000547372 PRSS3P2Q8NHM4 247 aa9.82□□□□□ -0.84
RBFOX1-208ENST00000547372 RNF183Q96D59 192 aa9.82□□□□□ -0.84
RBFOX1-208ENST00000547372 MS4A6AQ9H2W1 248 aa9.82□□□□□ -0.84
RBFOX1-208ENST00000547372 NHP2Q9NX24 153 aaKnown RBP9.82□□□□□ -0.84
RBFOX1-208ENST00000547372 GGTLC3B5MD39 225 aa9.82□□□□□ -0.84
RBFOX1-208ENST00000547372 MOB1BQ7L9L4 216 aa9.82□□□□□ -0.84
RBFOX1-208ENST00000547372 CNEP1R1Q8N9A8 125 aa9.82□□□□□ -0.84
RBFOX1-208ENST00000547372 H1FXQ92522 213 aaKnown RBP9.82□□□□□ -0.84
RBFOX1-208ENST00000547372 SPTBN5Q9NRC6 3674 aaKnown RBP9.82□□□□□ -0.84
RBFOX1-208ENST00000547372 EP300Q09472 2414 aaPredicted RBP9.82□□□□□ -0.84
RBFOX1-208ENST00000547372 HOXA4Q00056 320 aaPredicted RBP9.82□□□□□ -0.84
RBFOX1-208ENST00000547372 SFTA2Q6UW10 78 aa9.82□□□□□ -0.84
RBFOX1-208ENST00000547372 MOB3BQ86TA1 216 aa9.82□□□□□ -0.84
RBFOX1-208ENST00000547372 PCP2Q8IVA1 136 aa9.82□□□□□ -0.84
RBFOX1-208ENST00000547372 COLQQ9Y215 455 aaPredicted RBP9.82□□□□□ -0.84
RBFOX1-208ENST00000547372 LY96Q9Y6Y9 160 aa9.82□□□□□ -0.84
RBFOX1-208ENST00000547372 PCNX1Q96RV3 2341 aa9.81□□□□□ -0.84
RBFOX1-208ENST00000547372 PRUNE2Q8WUY3 3088 aa9.81□□□□□ -0.84
RBFOX1-208ENST00000547372 A8MWL6 223 aa9.81□□□□□ -0.84
RBFOX1-208ENST00000547372 CCL7P80098 99 aa9.81□□□□□ -0.84
RBFOX1-208ENST00000547372 ABHD17BQ5VST6 288 aa9.81□□□□□ -0.84
RBFOX1-208ENST00000547372 C20orf78Q9BR46 151 aa9.81□□□□□ -0.84
RBFOX1-208ENST00000547372 TTTY13Q9BZ97 58 aa9.81□□□□□ -0.84
RBFOX1-208ENST00000547372 TRAV5A0A0B4J249 113 aa9.81□□□□□ -0.84
RBFOX1-208ENST00000547372 OR9G9P0C7N8 305 aa9.81□□□□□ -0.84
RBFOX1-208ENST00000547372 FAM120AOSQ5T036 256 aa9.81□□□□□ -0.84
RBFOX1-208ENST00000547372 FGF23Q9GZV9 251 aaPredicted RBP9.81□□□□□ -0.84
RBFOX1-208ENST00000547372 ARFGEF3Q5TH69 2177 aa9.81□□□□□ -0.84
RBFOX1-208ENST00000547372 A0A1B0GWB2 263 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms