RNA–Protein interactions for RNA: ENST00000546820.5

PTCH1-213, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 864 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-213ENST00000546820 WNK1Q9H4A3 2382 aa10.58□□□□□ -0.72
PTCH1-213ENST00000546820 OR2T8A6NH00 312 aa10.58□□□□□ -0.72
PTCH1-213ENST00000546820 PPP5D1E7EU14 171 aa10.58□□□□□ -0.72
PTCH1-213ENST00000546820 TGOLN2O43493 480 aa10.58□□□□□ -0.72
PTCH1-213ENST00000546820 OR2C1O95371 312 aa10.58□□□□□ -0.72
PTCH1-213ENST00000546820 GPX4P36969 197 aaPredicted RBP10.58□□□□□ -0.72
PTCH1-213ENST00000546820 KLF5Q13887 457 aaPredicted RBP10.58□□□□□ -0.72
PTCH1-213ENST00000546820 GPHB5Q86YW7 130 aa10.58□□□□□ -0.72
PTCH1-213ENST00000546820 CACNG8Q8WXS5 425 aa10.58□□□□□ -0.72
PTCH1-213ENST00000546820 DLX4Q92988 240 aaPredicted RBP10.58□□□□□ -0.72
PTCH1-213ENST00000546820 ELOVL1Q9BW60 279 aa10.58□□□□□ -0.72
PTCH1-213ENST00000546820 NMES1Q9C002 83 aa10.58□□□□□ -0.72
PTCH1-213ENST00000546820 MGAT4CQ9UBM8 478 aa10.58□□□□□ -0.72
PTCH1-213ENST00000546820 LSM5Q9Y4Y9 91 aaKnown RBP10.58□□□□□ -0.72
PTCH1-213ENST00000546820 TRAV30A0A087WSZ9 112 aa10.57□□□□□ -0.72
PTCH1-213ENST00000546820 SIX6O95475 246 aa10.57□□□□□ -0.72
PTCH1-213ENST00000546820 IGHV3-48P01763 117 aa10.57□□□□□ -0.72
PTCH1-213ENST00000546820 SYNJ2BPP57105 145 aa10.57□□□□□ -0.72
PTCH1-213ENST00000546820 C1QL4Q86Z23 238 aa10.57□□□□□ -0.72
PTCH1-213ENST00000546820 OR4X1Q8NH49 305 aa10.57□□□□□ -0.72
PTCH1-213ENST00000546820 PEMTQ9UBM1 199 aa10.57□□□□□ -0.72
PTCH1-213ENST00000546820 C15orf62A8K5M9 175 aa10.56□□□□□ -0.72
PTCH1-213ENST00000546820 K7EPK0 472 aa10.56□□□□□ -0.72
PTCH1-213ENST00000546820 TSC22D2O75157 780 aa10.56□□□□□ -0.72
PTCH1-213ENST00000546820 TMEM50AO95807 157 aa10.56□□□□□ -0.72
PTCH1-213ENST00000546820 CTSGP08311 255 aa10.56□□□□□ -0.72
PTCH1-213ENST00000546820 S100A10P60903 97 aa10.56□□□□□ -0.72
PTCH1-213ENST00000546820 RELQ04864 619 aaPredicted RBP10.56□□□□□ -0.72
PTCH1-213ENST00000546820 CD69Q07108 199 aa10.56□□□□□ -0.72
PTCH1-213ENST00000546820 IL15RAQ13261 267 aa10.56□□□□□ -0.72
PTCH1-213ENST00000546820 MLANAQ16655 118 aa10.56□□□□□ -0.72
PTCH1-213ENST00000546820 C11orf87Q6NUJ2 197 aa10.56□□□□□ -0.72
PTCH1-213ENST00000546820 TMEM170AQ8WVE7 144 aa10.56□□□□□ -0.72
PTCH1-213ENST00000546820 OR4C12Q96R67 309 aa10.56□□□□□ -0.72
PTCH1-213ENST00000546820 FNDC4Q9H6D8 234 aaPredicted RBP10.56□□□□□ -0.72
PTCH1-213ENST00000546820 ZC4H2Q9NQZ6 224 aa10.56□□□□□ -0.72
PTCH1-213ENST00000546820 RCL1Q9Y2P8 373 aaKnown RBP10.56□□□□□ -0.72
PTCH1-213ENST00000546820 ANK2Q01484 3957 aa10.55□□□□□ -0.72
PTCH1-213ENST00000546820 ZNF320A2RRD8 509 aa10.55□□□□□ -0.72
PTCH1-213ENST00000546820 SEC14L6B5MCN3 397 aa10.55□□□□□ -0.72
PTCH1-213ENST00000546820 H3BP45 60 aa10.55□□□□□ -0.72
PTCH1-213ENST00000546820 LGALS9O00182 355 aa10.55□□□□□ -0.72
PTCH1-213ENST00000546820 CLN5O75503 358 aa10.55□□□□□ -0.72
PTCH1-213ENST00000546820 SCAF4O95104 1147 aaKnown RBP10.55□□□□□ -0.72
PTCH1-213ENST00000546820 IGLL1P15814 213 aa10.55□□□□□ -0.72
PTCH1-213ENST00000546820 INSL3P51460 131 aa10.55□□□□□ -0.72
PTCH1-213ENST00000546820 BCAP31P51572 246 aa10.55□□□□□ -0.72
PTCH1-213ENST00000546820 PAX9P55771 341 aa10.55□□□□□ -0.72
PTCH1-213ENST00000546820 RAB32Q13637 225 aa10.55□□□□□ -0.72
PTCH1-213ENST00000546820 C9orf66Q5T8R8 295 aa10.55□□□□□ -0.72
PTCH1-213ENST00000546820 TMEM116Q8NCL8 245 aa10.55□□□□□ -0.72
PTCH1-213ENST00000546820 OR9G4Q8NGQ1 327 aa10.55□□□□□ -0.72
PTCH1-213ENST00000546820 SLC35E1Q96K37 410 aa10.55□□□□□ -0.72
PTCH1-213ENST00000546820 ZMAT5Q9UDW3 170 aaKnown RBP10.55□□□□□ -0.72
PTCH1-213ENST00000546820 F8W735 103 aaPredicted RBP10.54□□□□□ -0.72
PTCH1-213ENST00000546820 NDUFA4O00483 81 aa10.54□□□□□ -0.72
PTCH1-213ENST00000546820 PET100P0DJ07 73 aa10.54□□□□□ -0.72
PTCH1-213ENST00000546820 H2BFSP57053 126 aa10.54□□□□□ -0.72
PTCH1-213ENST00000546820 PRSS54Q6PEW0 395 aa10.54□□□□□ -0.72
PTCH1-213ENST00000546820 SLC16A13Q7RTY0 426 aa10.54□□□□□ -0.72
PTCH1-213ENST00000546820 OR10P1Q8NGE3 313 aa10.54□□□□□ -0.72
PTCH1-213ENST00000546820 CHRDL1Q9BU40 450 aa10.54□□□□□ -0.72
PTCH1-213ENST00000546820 UFC1Q9Y3C8 167 aa10.54□□□□□ -0.72
PTCH1-213ENST00000546820 SAP30O75446 220 aa10.53□□□□□ -0.72
PTCH1-213ENST00000546820 YIF1AO95070 293 aa10.53□□□□□ -0.72
PTCH1-213ENST00000546820 METTL15P1P0C7V9 234 aa10.53□□□□□ -0.72
PTCH1-213ENST00000546820 CAV2P51636 162 aa10.53□□□□□ -0.72
PTCH1-213ENST00000546820 RND2P52198 227 aa10.53□□□□□ -0.72
PTCH1-213ENST00000546820 RRAS2P62070 204 aaPredicted RBP10.53□□□□□ -0.72
PTCH1-213ENST00000546820 OXLD1Q5BKU9 147 aa10.53□□□□□ -0.72
PTCH1-213ENST00000546820 OR8G2PQ6IF36 304 aa10.53□□□□□ -0.72
PTCH1-213ENST00000546820 TMEM14EPQ6UXP3 125 aa10.53□□□□□ -0.72
PTCH1-213ENST00000546820 REC114Q7Z4M0 266 aa10.53□□□□□ -0.72
PTCH1-213ENST00000546820 ASB13Q8WXK3 278 aa10.53□□□□□ -0.72
PTCH1-213ENST00000546820 NPIPB3Q92617 1050 aa10.53□□□□□ -0.72
PTCH1-213ENST00000546820 ACY3Q96HD9 319 aa10.53□□□□□ -0.72
PTCH1-213ENST00000546820 ZNF436Q9C0F3 470 aaPredicted RBP10.53□□□□□ -0.72
PTCH1-213ENST00000546820 VWFP04275 2813 aa10.53□□□□□ -0.72
PTCH1-213ENST00000546820 IGHV3-35A0A0C4DH35 117 aa10.52□□□□□ -0.73
PTCH1-213ENST00000546820 E5RGE8 158 aa10.52□□□□□ -0.73
PTCH1-213ENST00000546820 DEDDO75618 318 aa10.52□□□□□ -0.73
PTCH1-213ENST00000546820 FABP1P07148 127 aa10.52□□□□□ -0.73
PTCH1-213ENST00000546820 OR10J1P30954 320 aa10.52□□□□□ -0.73
PTCH1-213ENST00000546820 ADMP35318 185 aa10.52□□□□□ -0.73
PTCH1-213ENST00000546820 ELLP55199 621 aaPredicted RBP10.52□□□□□ -0.73
PTCH1-213ENST00000546820 GAMTQ14353 236 aa10.52□□□□□ -0.73
PTCH1-213ENST00000546820 FCN2Q15485 313 aa10.52□□□□□ -0.73
PTCH1-213ENST00000546820 LRRC37A5PQ49AS3 106 aa10.52□□□□□ -0.73
PTCH1-213ENST00000546820 ZNF600Q6ZNG1 722 aa10.52□□□□□ -0.73
PTCH1-213ENST00000546820 OR1S2Q8NGQ3 325 aa10.52□□□□□ -0.73
PTCH1-213ENST00000546820 Q8WTZ3 238 aa10.52□□□□□ -0.73
PTCH1-213ENST00000546820 PPP1R1CQ8WVI7 109 aa10.52□□□□□ -0.73
PTCH1-213ENST00000546820 SLC25A31Q9H0C2 315 aa10.52□□□□□ -0.73
PTCH1-213ENST00000546820 SIGLEC8Q9NYZ4 499 aa10.52□□□□□ -0.73
PTCH1-213ENST00000546820 ZFP92A6NM28 416 aa10.51□□□□□ -0.73
PTCH1-213ENST00000546820 CXCL3P19876 107 aa10.51□□□□□ -0.73
PTCH1-213ENST00000546820 YPEL3P61236 119 aaPredicted RBP10.51□□□□□ -0.73
PTCH1-213ENST00000546820 FGL1Q08830 312 aa10.51□□□□□ -0.73
PTCH1-213ENST00000546820 MARC2Q969Z3 335 aa10.51□□□□□ -0.73
PTCH1-213ENST00000546820 C20orf24Q9BUV8 137 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms