RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 FAM90A9PA6NNJ1 464 aa9.52□□□□□ -0.89
CCDC38-202ENST00000546386 PYYP10082 97 aa9.52□□□□□ -0.89
CCDC38-202ENST00000546386 NPPCP23582 126 aa9.52□□□□□ -0.89
CCDC38-202ENST00000546386 TAGLN2P37802 199 aaKnown RBP9.52□□□□□ -0.89
CCDC38-202ENST00000546386 FXYD3Q14802 87 aa9.52□□□□□ -0.89
CCDC38-202ENST00000546386 C10orf91Q5T1B1 145 aa9.52□□□□□ -0.89
CCDC38-202ENST00000546386 C8orf46Q8TAG6 207 aa9.52□□□□□ -0.89
CCDC38-202ENST00000546386 CFHR4Q92496 578 aa9.52□□□□□ -0.89
CCDC38-202ENST00000546386 WNT10AQ9GZT5 417 aa9.52□□□□□ -0.89
CCDC38-202ENST00000546386 ZNF257Q9Y2Q1 563 aa9.52□□□□□ -0.89
CCDC38-202ENST00000546386 IGHV2-70DA0A0C4DH43 119 aa9.51□□□□□ -0.89
CCDC38-202ENST00000546386 MDFIC2A0A1B0GVS7 189 aa9.51□□□□□ -0.89
CCDC38-202ENST00000546386 CYB5BO43169 146 aa9.51□□□□□ -0.89
CCDC38-202ENST00000546386 AVPP01185 164 aa9.51□□□□□ -0.89
CCDC38-202ENST00000546386 LINC00869P0C866 280 aa9.51□□□□□ -0.89
CCDC38-202ENST00000546386 COMPP49747 757 aaPredicted RBP9.51□□□□□ -0.89
CCDC38-202ENST00000546386 CD69Q07108 199 aa9.51□□□□□ -0.89
CCDC38-202ENST00000546386 ACOT6Q3I5F7 207 aaPredicted RBP9.51□□□□□ -0.89
CCDC38-202ENST00000546386 VSTM2AQ8TAG5 236 aa9.51□□□□□ -0.89
CCDC38-202ENST00000546386 ASCL2Q99929 193 aa9.51□□□□□ -0.89
CCDC38-202ENST00000546386 FKBP11Q9NYL4 201 aa9.51□□□□□ -0.89
CCDC38-202ENST00000546386 CTXND1A0A1B0GTU2 59 aa9.51□□□□□ -0.89
CCDC38-202ENST00000546386 C11orf94C9JXX5 98 aa9.51□□□□□ -0.89
CCDC38-202ENST00000546386 MT-CO2P00403 227 aa9.51□□□□□ -0.89
CCDC38-202ENST00000546386 RBP4P02753 201 aa9.51□□□□□ -0.89
CCDC38-202ENST00000546386 LGALS7P47929 136 aa9.51□□□□□ -0.89
CCDC38-202ENST00000546386 PAX2Q02962 417 aa9.51□□□□□ -0.89
CCDC38-202ENST00000546386 ADIRFQ15847 76 aa9.51□□□□□ -0.89
CCDC38-202ENST00000546386 SLC35E3Q7Z769 313 aa9.51□□□□□ -0.89
CCDC38-202ENST00000546386 OR11H6Q8NGC7 330 aa9.51□□□□□ -0.89
CCDC38-202ENST00000546386 OR1B1Q8NGR6 318 aa9.51□□□□□ -0.89
CCDC38-202ENST00000546386 SIRPDQ9H106 197 aa9.51□□□□□ -0.89
CCDC38-202ENST00000546386 YTHDF2Q9Y5A9 579 aaKnown RBP9.51□□□□□ -0.89
CCDC38-202ENST00000546386 PDZD2O15018 2839 aa9.5□□□□□ -0.89
CCDC38-202ENST00000546386 AKAP9Q99996 3911 aa9.5□□□□□ -0.89
CCDC38-202ENST00000546386 OTOGQ6ZRI0 2925 aa9.5□□□□□ -0.89
CCDC38-202ENST00000546386 CENPVL3A0A0U1RRI6 287 aa9.5□□□□□ -0.89
CCDC38-202ENST00000546386 TEX22C9J3V5 150 aa9.5□□□□□ -0.89
CCDC38-202ENST00000546386 NDUFB4O95168 129 aa9.5□□□□□ -0.89
CCDC38-202ENST00000546386 CX3CL1P78423 397 aa9.5□□□□□ -0.89
CCDC38-202ENST00000546386 MEF2BQ02080 365 aaPredicted RBP9.5□□□□□ -0.89
CCDC38-202ENST00000546386 C9orf152Q5JTZ5 239 aa9.5□□□□□ -0.89
CCDC38-202ENST00000546386 FAM90A2PQ658T7 463 aa9.5□□□□□ -0.89
CCDC38-202ENST00000546386 SPNS3Q6ZMD2 512 aa9.5□□□□□ -0.89
CCDC38-202ENST00000546386 MBD3L1Q8WWY6 194 aa9.5□□□□□ -0.89
CCDC38-202ENST00000546386 HSPB9Q9BQS6 159 aa9.5□□□□□ -0.89
CCDC38-202ENST00000546386 KPTNQ9Y664 436 aa9.5□□□□□ -0.89
CCDC38-202ENST00000546386 A0A0U1RQK1 487 aa9.5□□□□□ -0.89
CCDC38-202ENST00000546386 NBR2O15453 112 aa9.5□□□□□ -0.89
CCDC38-202ENST00000546386 ECSCRQ19T08 205 aa9.5□□□□□ -0.89
CCDC38-202ENST00000546386 ZNF506Q5JVG8 444 aa9.5□□□□□ -0.89
CCDC38-202ENST00000546386 HIST2H2BDQ6DRA6 164 aa9.5□□□□□ -0.89
CCDC38-202ENST00000546386 CLEC2AQ6UVW9 174 aa9.5□□□□□ -0.89
CCDC38-202ENST00000546386 BLNKQ8WV28 456 aa9.5□□□□□ -0.89
CCDC38-202ENST00000546386 LINC00479Q96M42 142 aa9.5□□□□□ -0.89
CCDC38-202ENST00000546386 MS4A10Q96PG2 267 aa9.5□□□□□ -0.89
CCDC38-202ENST00000546386 SMIM7Q9BQ49 75 aa9.5□□□□□ -0.89
CCDC38-202ENST00000546386 ZNF355PQ9NSJ1 428 aa9.5□□□□□ -0.89
CCDC38-202ENST00000546386 G3V318 75 aa9.49□□□□□ -0.89
CCDC38-202ENST00000546386 HBE1P02100 147 aa9.49□□□□□ -0.89
CCDC38-202ENST00000546386 TMEM11P17152 192 aa9.49□□□□□ -0.89
CCDC38-202ENST00000546386 PDLIM4P50479 330 aa9.49□□□□□ -0.89
CCDC38-202ENST00000546386 TMEM30BQ3MIR4 351 aa9.49□□□□□ -0.89
CCDC38-202ENST00000546386 C2orf83Q53S99 150 aa9.49□□□□□ -0.89
CCDC38-202ENST00000546386 PRR31Q5SQ13 230 aa9.49□□□□□ -0.89
CCDC38-202ENST00000546386 MMD2Q8IY49 270 aa9.49□□□□□ -0.89
CCDC38-202ENST00000546386 NHLRC2Q8NBF2 726 aa9.49□□□□□ -0.89
CCDC38-202ENST00000546386 DUX5Q96PT3 197 aa9.49□□□□□ -0.89
CCDC38-202ENST00000546386 RPH3ALQ9UNE2 315 aa9.49□□□□□ -0.89
CCDC38-202ENST00000546386 SCO2A0A1W2PP80 73 aa9.49□□□□□ -0.89
CCDC38-202ENST00000546386 NUDT19A8MXV4 375 aa9.49□□□□□ -0.89
CCDC38-202ENST00000546386 ODF3BA8MYP8 253 aa9.49□□□□□ -0.89
CCDC38-202ENST00000546386 PSMB3P49720 205 aa9.49□□□□□ -0.89
CCDC38-202ENST00000546386 LCNL1Q6ZST4 164 aa9.49□□□□□ -0.89
CCDC38-202ENST00000546386 ZNF114Q8NC26 417 aa9.49□□□□□ -0.89
CCDC38-202ENST00000546386 OR4X1Q8NH49 305 aa9.49□□□□□ -0.89
CCDC38-202ENST00000546386 AJUBAQ96IF1 538 aa9.49□□□□□ -0.89
CCDC38-202ENST00000546386 SLC35E1Q96K37 410 aa9.49□□□□□ -0.89
CCDC38-202ENST00000546386 NIPSNAP3BQ9BS92 247 aa9.49□□□□□ -0.89
CCDC38-202ENST00000546386 C7orf69Q9H7B7 122 aa9.49□□□□□ -0.89
CCDC38-202ENST00000546386 VAX2Q9UIW0 290 aa9.49□□□□□ -0.89
CCDC38-202ENST00000546386 AMMECR1Q9Y4X0 333 aaPredicted RBP9.49□□□□□ -0.89
CCDC38-202ENST00000546386 SORL1Q92673 2214 aa9.49□□□□□ -0.89
CCDC38-202ENST00000546386 IGKV1D-37A0A075B6S9 117 aa9.48□□□□□ -0.89
CCDC38-202ENST00000546386 CRYGBP07316 175 aa9.48□□□□□ -0.89
CCDC38-202ENST00000546386 TMEM144Q7Z5S9 345 aa9.48□□□□□ -0.89
CCDC38-202ENST00000546386 SLC45A2Q9UMX9 530 aa9.48□□□□□ -0.89
CCDC38-202ENST00000546386 IGHV3OR16-13A0A075B7E8 117 aa9.48□□□□□ -0.89
CCDC38-202ENST00000546386 IGHV3-74A0A0B4J1X5 117 aa9.48□□□□□ -0.89
CCDC38-202ENST00000546386 RNF223E7ERA6 249 aa9.48□□□□□ -0.89
CCDC38-202ENST00000546386 CRYBA1P05813 215 aa9.48□□□□□ -0.89
CCDC38-202ENST00000546386 COX6B1P14854 86 aa9.48□□□□□ -0.89
CCDC38-202ENST00000546386 CENPVQ7Z7K6 275 aaPredicted RBP9.48□□□□□ -0.89
CCDC38-202ENST00000546386 C8orf31Q8N9H6 132 aa9.48□□□□□ -0.89
CCDC38-202ENST00000546386 PIMREGQ9BSJ6 248 aa9.48□□□□□ -0.89
CCDC38-202ENST00000546386 PARLQ9H300 379 aa9.48□□□□□ -0.89
CCDC38-202ENST00000546386 HIF1ANQ9NWT6 349 aa9.48□□□□□ -0.89
CCDC38-202ENST00000546386 NOTCH3Q9UM47 2321 aa9.48□□□□□ -0.89
CCDC38-202ENST00000546386 TGIF2-C20orf24A0A0A6YYL0 155 aa9.47□□□□□ -0.89
CCDC38-202ENST00000546386 M0R1W7 72 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms