RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 LBHQ53QV2 105 aaPredicted RBP12.03□□□□□ -0.48
HOXC11-202ENST00000546378 COMMD5Q9GZQ3 224 aa12.03□□□□□ -0.48
HOXC11-202ENST00000546378 CDC42EP3Q9UKI2 254 aa12.03□□□□□ -0.48
HOXC11-202ENST00000546378 CBY1Q9Y3M2 126 aa12.03□□□□□ -0.48
HOXC11-202ENST00000546378 SLC35E4Q6ICL7 350 aa12.02□□□□□ -0.48
HOXC11-202ENST00000546378 Q6ZSR3 168 aa12.02□□□□□ -0.48
HOXC11-202ENST00000546378 MDS2Q8NDY4 140 aa12.02□□□□□ -0.48
HOXC11-202ENST00000546378 COL5A1P20908 1838 aaPredicted RBP12.02□□□□□ -0.48
HOXC11-202ENST00000546378 SETD2Q9BYW2 2564 aaPredicted RBP12.02□□□□□ -0.49
HOXC11-202ENST00000546378 DOPEY2Q9Y3R5 2298 aa12.02□□□□□ -0.49
HOXC11-202ENST00000546378 ZNF891A8MT65 544 aaPredicted RBP12.02□□□□□ -0.49
HOXC11-202ENST00000546378 PPOXP50336 477 aa12.02□□□□□ -0.49
HOXC11-202ENST00000546378 DIAPH2-AS1Q14236 149 aa12.02□□□□□ -0.49
HOXC11-202ENST00000546378 GABRA6Q16445 453 aa12.02□□□□□ -0.49
HOXC11-202ENST00000546378 SP5Q6BEB4 398 aaPredicted RBP12.02□□□□□ -0.49
HOXC11-202ENST00000546378 CA7P43166 264 aa12.01□□□□□ -0.49
HOXC11-202ENST00000546378 CCL17Q92583 94 aa12.01□□□□□ -0.49
HOXC11-202ENST00000546378 MBNL3Q9NUK0 354 aaKnown RBP12.01□□□□□ -0.49
HOXC11-202ENST00000546378 CALYQ9NYX4 217 aa12.01□□□□□ -0.49
HOXC11-202ENST00000546378 TIMM9Q9Y5J7 89 aa12.01□□□□□ -0.49
HOXC11-202ENST00000546378 IGKV1D-17A0A075B6S4 117 aa12.01□□□□□ -0.49
HOXC11-202ENST00000546378 IGKV1OR2-108A0A075B7D4 117 aa12.01□□□□□ -0.49
HOXC11-202ENST00000546378 FAM90A26D6RGX4 464 aa12.01□□□□□ -0.49
HOXC11-202ENST00000546378 BMPR1BO00238 502 aa12.01□□□□□ -0.49
HOXC11-202ENST00000546378 CCL25O15444 150 aa12.01□□□□□ -0.49
HOXC11-202ENST00000546378 ZNF146Q15072 292 aa12.01□□□□□ -0.49
HOXC11-202ENST00000546378 Q6ZS49 121 aa12.01□□□□□ -0.49
HOXC11-202ENST00000546378 CXXC4Q9H2H0 198 aa12.01□□□□□ -0.49
HOXC11-202ENST00000546378 IL19Q9UHD0 177 aa12.01□□□□□ -0.49
HOXC11-202ENST00000546378 SLC45A2Q9UMX9 530 aa12.01□□□□□ -0.49
HOXC11-202ENST00000546378 SERTM2A0A1B0GWG4 89 aa12.01□□□□□ -0.49
HOXC11-202ENST00000546378 K7EM74 188 aa12.01□□□□□ -0.49
HOXC11-202ENST00000546378 ISLRO14498 428 aa12.01□□□□□ -0.49
HOXC11-202ENST00000546378 Q71RC1 249 aaPredicted RBP12.01□□□□□ -0.49
HOXC11-202ENST00000546378 RAB37Q96AX2 223 aa12.01□□□□□ -0.49
HOXC11-202ENST00000546378 HIGD1CA8MV81 97 aa12□□□□□ -0.49
HOXC11-202ENST00000546378 MPV17L2Q567V2 206 aa12□□□□□ -0.49
HOXC11-202ENST00000546378 CT45A1Q5HYN5 189 aa12□□□□□ -0.49
HOXC11-202ENST00000546378 C9orf106Q8NAJ2 232 aa12□□□□□ -0.49
HOXC11-202ENST00000546378 CT45A3Q8NHU0 189 aa12□□□□□ -0.49
HOXC11-202ENST00000546378 HARBI1Q96MB7 349 aa12□□□□□ -0.49
HOXC11-202ENST00000546378 SRRM4A7MD48 611 aaKnown RBP12□□□□□ -0.49
HOXC11-202ENST00000546378 ZNF324O75467 553 aaPredicted RBP12□□□□□ -0.49
HOXC11-202ENST00000546378 NUDT3O95989 172 aa12□□□□□ -0.49
HOXC11-202ENST00000546378 FOXL1Q12952 345 aa12□□□□□ -0.49
HOXC11-202ENST00000546378 KRTAP27-1Q3LI81 207 aa12□□□□□ -0.49
HOXC11-202ENST00000546378 TMEM144Q7Z5S9 345 aa12□□□□□ -0.49
HOXC11-202ENST00000546378 ANKHD1Q8IWZ3 2542 aaKnown RBP12□□□□□ -0.49
HOXC11-202ENST00000546378 TRAV17A0A0B4J275 112 aa11.99□□□□□ -0.49
HOXC11-202ENST00000546378 KIR2DL5BA0A0G2JN68 375 aa11.99□□□□□ -0.49
HOXC11-202ENST00000546378 KIR2DL5BA0A0G2JPC4 375 aa11.99□□□□□ -0.49
HOXC11-202ENST00000546378 PAFAH1B2P68402 229 aa11.99□□□□□ -0.49
HOXC11-202ENST00000546378 RPL19P84098 196 aaKnown RBP11.99□□□□□ -0.49
HOXC11-202ENST00000546378 C11orf53Q8IXP5 236 aa11.99□□□□□ -0.49
HOXC11-202ENST00000546378 KIR2DL5AQ8N109 375 aa11.99□□□□□ -0.49
HOXC11-202ENST00000546378 ZADH2Q8N4Q0 377 aa11.99□□□□□ -0.49
HOXC11-202ENST00000546378 TSKUQ8WUA8 353 aa11.99□□□□□ -0.49
HOXC11-202ENST00000546378 V9GYV3 84 aa11.99□□□□□ -0.49
HOXC11-202ENST00000546378 DSCAMO60469 2012 aa11.99□□□□□ -0.49
HOXC11-202ENST00000546378 OR4S2Q8NH73 311 aa11.99□□□□□ -0.49
HOXC11-202ENST00000546378 TMEM45BQ96B21 275 aa11.99□□□□□ -0.49
HOXC11-202ENST00000546378 SAP30LQ9HAJ7 183 aa11.99□□□□□ -0.49
HOXC11-202ENST00000546378 AMMECR1Q9Y4X0 333 aaPredicted RBP11.99□□□□□ -0.49
HOXC11-202ENST00000546378 PGPA6NDG6 321 aa11.99□□□□□ -0.49
HOXC11-202ENST00000546378 NHLH1Q02575 133 aa11.99□□□□□ -0.49
HOXC11-202ENST00000546378 MSMPQ1L6U9 139 aa11.99□□□□□ -0.49
HOXC11-202ENST00000546378 COA6Q5JTJ3 125 aaKnown RBP11.99□□□□□ -0.49
HOXC11-202ENST00000546378 E7EUB6 86 aa11.98□□□□□ -0.49
HOXC11-202ENST00000546378 ERVK11-1P61568 191 aa11.98□□□□□ -0.49
HOXC11-202ENST00000546378 LINC00596Q86U02 117 aa11.98□□□□□ -0.49
HOXC11-202ENST00000546378 Q8NFD4 153 aa11.98□□□□□ -0.49
HOXC11-202ENST00000546378 UQCR10Q9UDW1 63 aa11.98□□□□□ -0.49
HOXC11-202ENST00000546378 IGKV3D-15A0A087WSY6 115 aa11.98□□□□□ -0.49
HOXC11-202ENST00000546378 A0A087X0K7 114 aa11.98□□□□□ -0.49
HOXC11-202ENST00000546378 PDLIM4P50479 330 aa11.98□□□□□ -0.49
HOXC11-202ENST00000546378 Q8N7P7 452 aa11.98□□□□□ -0.49
HOXC11-202ENST00000546378 OR8B3Q8NGG8 313 aa11.98□□□□□ -0.49
HOXC11-202ENST00000546378 DAZAP1Q96EP5 407 aaKnown RBP11.98□□□□□ -0.49
HOXC11-202ENST00000546378 SLC25A17O43808 307 aa11.98□□□□□ -0.49
HOXC11-202ENST00000546378 LDLRAD2Q5SZI1 272 aa11.98□□□□□ -0.49
HOXC11-202ENST00000546378 FAM214BQ7L5A3 538 aa11.98□□□□□ -0.49
HOXC11-202ENST00000546378 C1orf174Q8IYL3 243 aa11.98□□□□□ -0.49
HOXC11-202ENST00000546378 OR10X1Q8NGY0 326 aa11.98□□□□□ -0.49
HOXC11-202ENST00000546378 KCNS1Q96KK3 526 aa11.98□□□□□ -0.49
HOXC11-202ENST00000546378 LINC00470Q9BZP3 86 aa11.98□□□□□ -0.49
HOXC11-202ENST00000546378 C2CD3Q4AC94 2353 aa11.97□□□□□ -0.49
HOXC11-202ENST00000546378 hADV38S2A0JD32 116 aa11.97□□□□□ -0.49
HOXC11-202ENST00000546378 HSPE1P61604 102 aaKnown RBP11.97□□□□□ -0.49
HOXC11-202ENST00000546378 DEFB104AQ8WTQ1 72 aa11.97□□□□□ -0.49
HOXC11-202ENST00000546378 PARD6GQ9BYG4 376 aaPredicted RBP11.97□□□□□ -0.49
HOXC11-202ENST00000546378 HILPDAQ9Y5L2 63 aa11.97□□□□□ -0.49
HOXC11-202ENST00000546378 COL27A1Q8IZC6 1860 aaPredicted RBP11.97□□□□□ -0.49
HOXC11-202ENST00000546378 TYMSP04818 313 aa11.97□□□□□ -0.49
HOXC11-202ENST00000546378 WFDC8Q8IUA0 241 aa11.97□□□□□ -0.49
HOXC11-202ENST00000546378 GCSAMQ8N6F7 178 aa11.97□□□□□ -0.49
HOXC11-202ENST00000546378 OR8A1Q8NGG7 326 aa11.97□□□□□ -0.49
HOXC11-202ENST00000546378 CORO2AQ92828 525 aa11.97□□□□□ -0.49
HOXC11-202ENST00000546378 BET1LQ9NYM9 111 aa11.97□□□□□ -0.49
HOXC11-202ENST00000546378 SORL1Q92673 2214 aa11.96□□□□□ -0.49
HOXC11-202ENST00000546378 TRGV10A0A0A0MS01 117 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms