RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 C9orf106Q8NAJ2 232 aa10.14□□□□□ -0.79
NPC1L1-204ENST00000546276 ATP5L2Q7Z4Y8 100 aa10.14□□□□□ -0.79
NPC1L1-204ENST00000546276 SPCS1Q9Y6A9 102 aa10.14□□□□□ -0.79
NPC1L1-204ENST00000546276 LY96Q9Y6Y9 160 aa10.14□□□□□ -0.79
NPC1L1-204ENST00000546276 FNDC1Q4ZHG4 1894 aaPredicted RBP10.14□□□□□ -0.79
NPC1L1-204ENST00000546276 PLXNA4Q9HCM2 1894 aa10.14□□□□□ -0.79
NPC1L1-204ENST00000546276 TTC9CQ8N5M4 171 aa10.14□□□□□ -0.79
NPC1L1-204ENST00000546276 SEPSECSQ9HD40 501 aaKnown RBP10.14□□□□□ -0.79
NPC1L1-204ENST00000546276 SEMA5BQ9P283 1151 aa10.14□□□□□ -0.79
NPC1L1-204ENST00000546276 FOXA2Q9Y261 457 aaPredicted RBP10.14□□□□□ -0.79
NPC1L1-204ENST00000546276 ZDBF2Q9HCK1 2354 aa10.14□□□□□ -0.79
NPC1L1-204ENST00000546276 DPF1Q92782 380 aa10.14□□□□□ -0.79
NPC1L1-204ENST00000546276 VOPP1Q96AW1 172 aa10.14□□□□□ -0.79
NPC1L1-204ENST00000546276 LPAR2Q9HBW0 351 aa10.14□□□□□ -0.79
NPC1L1-204ENST00000546276 THSD7BQ9C0I4 1608 aa10.13□□□□□ -0.79
NPC1L1-204ENST00000546276 SH2D7A6NKC9 451 aaPredicted RBP10.13□□□□□ -0.79
NPC1L1-204ENST00000546276 ATP5LO75964 103 aa10.13□□□□□ -0.79
NPC1L1-204ENST00000546276 FAM27E3Q08E93 113 aa10.13□□□□□ -0.79
NPC1L1-204ENST00000546276 TM4SF20Q53R12 229 aa10.13□□□□□ -0.79
NPC1L1-204ENST00000546276 MRPL52Q86TS9 123 aaKnown RBP10.13□□□□□ -0.79
NPC1L1-204ENST00000546276 NEUROG1Q92886 237 aa10.13□□□□□ -0.79
NPC1L1-204ENST00000546276 CHCHD1Q96BP2 118 aaKnown RBP10.13□□□□□ -0.79
NPC1L1-204ENST00000546276 H7C2G1 150 aa10.13□□□□□ -0.79
NPC1L1-204ENST00000546276 Q6P435 159 aa10.13□□□□□ -0.79
NPC1L1-204ENST00000546276 PRR7Q8TB68 274 aa10.13□□□□□ -0.79
NPC1L1-204ENST00000546276 ST20Q9HBF5 79 aa10.13□□□□□ -0.79
NPC1L1-204ENST00000546276 ICE1Q9Y2F5 2266 aa10.13□□□□□ -0.79
NPC1L1-204ENST00000546276 DLX6P56179 175 aa10.13□□□□□ -0.79
NPC1L1-204ENST00000546276 FAM53AQ6NSI3 398 aaPredicted RBP10.13□□□□□ -0.79
NPC1L1-204ENST00000546276 RNF115Q9Y4L5 304 aa10.13□□□□□ -0.79
NPC1L1-204ENST00000546276 MUC21A0A0G2JKD1 596 aa10.13□□□□□ -0.79
NPC1L1-204ENST00000546276 MUC21A0A140T8X8 626 aa10.13□□□□□ -0.79
NPC1L1-204ENST00000546276 A8MWP6 167 aa10.13□□□□□ -0.79
NPC1L1-204ENST00000546276 COX6CP09669 75 aa10.13□□□□□ -0.79
NPC1L1-204ENST00000546276 CCL3L1P16619 93 aa10.13□□□□□ -0.79
NPC1L1-204ENST00000546276 MUC21Q5SSG8 566 aa10.13□□□□□ -0.79
NPC1L1-204ENST00000546276 IGHV3-35A0A0C4DH35 117 aa10.12□□□□□ -0.79
NPC1L1-204ENST00000546276 SP9P0CG40 484 aa10.12□□□□□ -0.79
NPC1L1-204ENST00000546276 NUDT10Q8NFP7 164 aa10.12□□□□□ -0.79
NPC1L1-204ENST00000546276 ZNF524Q96C55 264 aa10.12□□□□□ -0.79
NPC1L1-204ENST00000546276 NUDT11Q96G61 164 aa10.12□□□□□ -0.79
NPC1L1-204ENST00000546276 ZNF257Q9Y2Q1 563 aa10.12□□□□□ -0.79
NPC1L1-204ENST00000546276 PHF3Q92576 2039 aaKnown RBP10.12□□□□□ -0.79
NPC1L1-204ENST00000546276 B9A039 149 aa10.12□□□□□ -0.79
NPC1L1-204ENST00000546276 H3BUT2 72 aa10.12□□□□□ -0.79
NPC1L1-204ENST00000546276 PFN1P07737 140 aaKnown RBP10.12□□□□□ -0.79
NPC1L1-204ENST00000546276 AREGP15514 252 aa10.12□□□□□ -0.79
NPC1L1-204ENST00000546276 FER1L6-AS1Q8NA97 138 aa10.12□□□□□ -0.79
NPC1L1-204ENST00000546276 SYT8Q8NBV8 401 aa10.12□□□□□ -0.79
NPC1L1-204ENST00000546276 ESPL1Q14674 2120 aa10.12□□□□□ -0.79
NPC1L1-204ENST00000546276 ETV2O00321 342 aaPredicted RBP10.12□□□□□ -0.79
NPC1L1-204ENST00000546276 LGALS3P17931 250 aaKnown RBP10.12□□□□□ -0.79
NPC1L1-204ENST00000546276 NPPCP23582 126 aa10.12□□□□□ -0.79
NPC1L1-204ENST00000546276 LOC105371242A0A075B767 164 aa10.12□□□□□ -0.79
NPC1L1-204ENST00000546276 TRAV5A0A0B4J249 113 aa10.12□□□□□ -0.79
NPC1L1-204ENST00000546276 C19orf67A6NJJ6 358 aa10.12□□□□□ -0.79
NPC1L1-204ENST00000546276 WISP1O95388 367 aa10.12□□□□□ -0.79
NPC1L1-204ENST00000546276 C20orf204Q6ZNR8 217 aa10.12□□□□□ -0.79
NPC1L1-204ENST00000546276 C5orf30Q96GV9 206 aa10.12□□□□□ -0.79
NPC1L1-204ENST00000546276 FOXC2Q99958 501 aa10.12□□□□□ -0.79
NPC1L1-204ENST00000546276 FAM181BA6NEQ2 426 aa10.11□□□□□ -0.79
NPC1L1-204ENST00000546276 C15orf62A8K5M9 175 aa10.11□□□□□ -0.79
NPC1L1-204ENST00000546276 NTN3O00634 580 aaPredicted RBP10.11□□□□□ -0.79
NPC1L1-204ENST00000546276 RASL11AQ6T310 242 aa10.11□□□□□ -0.79
NPC1L1-204ENST00000546276 S4R3C0 116 aa10.11□□□□□ -0.79
NPC1L1-204ENST00000546276 HEATR5AQ86XA9 2040 aa10.11□□□□□ -0.79
NPC1L1-204ENST00000546276 EREGO14944 169 aa10.11□□□□□ -0.79
NPC1L1-204ENST00000546276 GPX1P07203 203 aa10.11□□□□□ -0.79
NPC1L1-204ENST00000546276 DPM3Q9P2X0 92 aa10.11□□□□□ -0.79
NPC1L1-204ENST00000546276 IGKV1-6A0A0C4DH72 117 aa10.11□□□□□ -0.79
NPC1L1-204ENST00000546276 SRRM5B3KS81 715 aa10.11□□□□□ -0.79
NPC1L1-204ENST00000546276 C9orf172C9J069 976 aa10.11□□□□□ -0.79
NPC1L1-204ENST00000546276 LILRA1O75019 489 aa10.11□□□□□ -0.79
NPC1L1-204ENST00000546276 FOXH1O75593 365 aa10.11□□□□□ -0.79
NPC1L1-204ENST00000546276 TMEM50AO95807 157 aa10.11□□□□□ -0.79
NPC1L1-204ENST00000546276 B3GALT5-AS1P59052 145 aa10.11□□□□□ -0.79
NPC1L1-204ENST00000546276 ZNF585BQ52M93 769 aa10.11□□□□□ -0.79
NPC1L1-204ENST00000546276 BMPERQ8N8U9 685 aa10.11□□□□□ -0.79
NPC1L1-204ENST00000546276 C21orf62Q9NYP8 219 aa10.11□□□□□ -0.79
NPC1L1-204ENST00000546276 SPRR3Q9UBC9 169 aa10.11□□□□□ -0.79
NPC1L1-204ENST00000546276 PLXNA2O75051 1894 aa10.11□□□□□ -0.79
NPC1L1-204ENST00000546276 WIPF3A6NGB9 483 aa10.1□□□□□ -0.79
NPC1L1-204ENST00000546276 NTF4P34130 210 aa10.1□□□□□ -0.79
NPC1L1-204ENST00000546276 LIME1Q9H400 295 aa10.1□□□□□ -0.79
NPC1L1-204ENST00000546276 JKAMPQ9P055 326 aa10.1□□□□□ -0.79
NPC1L1-204ENST00000546276 CEP250Q9BV73 2442 aa10.1□□□□□ -0.79
NPC1L1-204ENST00000546276 LINC00473A8K010 186 aa10.1□□□□□ -0.79
NPC1L1-204ENST00000546276 C17orf100A8MU93 164 aa10.1□□□□□ -0.79
NPC1L1-204ENST00000546276 PF4V1P10720 104 aa10.1□□□□□ -0.79
NPC1L1-204ENST00000546276 CSRP1P21291 193 aaKnown RBP10.1□□□□□ -0.79
NPC1L1-204ENST00000546276 EBLN2Q6P2I7 272 aa10.1□□□□□ -0.79
NPC1L1-204ENST00000546276 OR4X2Q8NGF9 303 aa10.1□□□□□ -0.79
NPC1L1-204ENST00000546276 EEF1AKMT3Q96AZ1 226 aa10.1□□□□□ -0.79
NPC1L1-204ENST00000546276 ZNF256Q9Y2P7 627 aaPredicted RBP10.1□□□□□ -0.79
NPC1L1-204ENST00000546276 C3orf79P0CE67 100 aa10.1□□□□□ -0.79
NPC1L1-204ENST00000546276 CD33P20138 364 aa10.1□□□□□ -0.79
NPC1L1-204ENST00000546276 TDGF1P3P51864 188 aa10.1□□□□□ -0.79
NPC1L1-204ENST00000546276 IL15RAQ13261 267 aa10.1□□□□□ -0.79
NPC1L1-204ENST00000546276 OR10W1Q8NGF6 305 aa10.1□□□□□ -0.79
NPC1L1-204ENST00000546276 TRAV3A0A0B4J244 114 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms