RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 NDUFA4O00483 81 aa13.4□□□□□ -0.26
CD9-211ENST00000546073 PITX3O75364 302 aa13.4□□□□□ -0.26
CD9-211ENST00000546073 IAPPP10997 89 aa13.4□□□□□ -0.26
CD9-211ENST00000546073 FCGR2BP31994 310 aaPredicted RBP13.4□□□□□ -0.26
CD9-211ENST00000546073 IFITM3Q01628 133 aa13.4□□□□□ -0.26
CD9-211ENST00000546073 MARC2Q969Z3 335 aa13.4□□□□□ -0.26
CD9-211ENST00000546073 SLC35E1Q96K37 410 aa13.4□□□□□ -0.26
CD9-211ENST00000546073 C20orf24Q9BUV8 137 aa13.4□□□□□ -0.26
CD9-211ENST00000546073 MAGT1Q9H0U3 335 aa13.4□□□□□ -0.26
CD9-211ENST00000546073 STRAPQ9Y3F4 350 aaKnown RBP13.4□□□□□ -0.26
CD9-211ENST00000546073 DMRT1Q9Y5R6 373 aa13.4□□□□□ -0.26
CD9-211ENST00000546073 WNK1Q9H4A3 2382 aa13.4□□□□□ -0.26
CD9-211ENST00000546073 MGAM2Q2M2H8 2515 aa13.39□□□□□ -0.27
CD9-211ENST00000546073 SSNA1O43805 119 aa13.39□□□□□ -0.27
CD9-211ENST00000546073 FABP1P07148 127 aa13.39□□□□□ -0.27
CD9-211ENST00000546073 ELLP55199 621 aaPredicted RBP13.39□□□□□ -0.27
CD9-211ENST00000546073 KPRPQ5T749 579 aaPredicted RBP13.39□□□□□ -0.27
CD9-211ENST00000546073 LCN12Q6JVE5 192 aa13.39□□□□□ -0.27
CD9-211ENST00000546073 NARS2Q96I59 477 aaKnown RBP13.39□□□□□ -0.27
CD9-211ENST00000546073 GINS3Q9BRX5 216 aa13.39□□□□□ -0.27
CD9-211ENST00000546073 PTTG1O95997 202 aa13.38□□□□□ -0.27
CD9-211ENST00000546073 IGHV3-48P01763 117 aa13.38□□□□□ -0.27
CD9-211ENST00000546073 BSXQ3C1V8 233 aa13.38□□□□□ -0.27
CD9-211ENST00000546073 SPANXN5Q5MJ07 72 aa13.38□□□□□ -0.27
CD9-211ENST00000546073 ZBTB8BQ8NAP8 495 aaPredicted RBP13.38□□□□□ -0.27
CD9-211ENST00000546073 OR4X1Q8NH49 305 aa13.38□□□□□ -0.27
CD9-211ENST00000546073 RAB40CQ96S21 281 aa13.38□□□□□ -0.27
CD9-211ENST00000546073 MARVELD1Q9BSK0 173 aa13.38□□□□□ -0.27
CD9-211ENST00000546073 SIGLEC8Q9NYZ4 499 aa13.38□□□□□ -0.27
CD9-211ENST00000546073 TECRQ9NZ01 308 aaKnown RBP13.38□□□□□ -0.27
CD9-211ENST00000546073 PSENENQ9NZ42 101 aa13.38□□□□□ -0.27
CD9-211ENST00000546073 ZNF256Q9Y2P7 627 aaPredicted RBP13.38□□□□□ -0.27
CD9-211ENST00000546073 IGHV3-35A0A0C4DH35 117 aa13.37□□□□□ -0.27
CD9-211ENST00000546073 WIPF1O43516 503 aa13.37□□□□□ -0.27
CD9-211ENST00000546073 SSSCA1O60232 199 aa13.37□□□□□ -0.27
CD9-211ENST00000546073 CLN5O75503 358 aa13.37□□□□□ -0.27
CD9-211ENST00000546073 RLN2P04090 185 aa13.37□□□□□ -0.27
CD9-211ENST00000546073 GPX4P36969 197 aaPredicted RBP13.37□□□□□ -0.27
CD9-211ENST00000546073 CYCSP99999 105 aaKnown RBP13.37□□□□□ -0.27
CD9-211ENST00000546073 ID3Q02535 119 aa13.37□□□□□ -0.27
CD9-211ENST00000546073 OR2K2Q8NGT1 345 aa13.37□□□□□ -0.27
CD9-211ENST00000546073 CACNG8Q8WXS5 425 aa13.37□□□□□ -0.27
CD9-211ENST00000546073 C2orf50Q96LR7 162 aa13.37□□□□□ -0.27
CD9-211ENST00000546073 SCAF4O95104 1147 aaKnown RBP13.36□□□□□ -0.27
CD9-211ENST00000546073 POLR2GP62487 172 aaKnown RBP eCLIP13.36□□□□□ -0.27
CD9-211ENST00000546073 EGFEM1PQ0D2K5 195 aa13.36□□□□□ -0.27
CD9-211ENST00000546073 DEFB121Q5J5C9 76 aa13.36□□□□□ -0.27
CD9-211ENST00000546073 PVRIGQ6DKI7 326 aa13.36□□□□□ -0.27
CD9-211ENST00000546073 LAMTOR1Q6IAA8 161 aa13.36□□□□□ -0.27
CD9-211ENST00000546073 ZNF600Q6ZNG1 722 aa13.36□□□□□ -0.27
CD9-211ENST00000546073 OR4D5Q8NGN0 318 aa13.36□□□□□ -0.27
CD9-211ENST00000546073 OR1S2Q8NGQ3 325 aa13.36□□□□□ -0.27
CD9-211ENST00000546073 Q8WTZ3 238 aa13.36□□□□□ -0.27
CD9-211ENST00000546073 ACY3Q96HD9 319 aa13.36□□□□□ -0.27
CD9-211ENST00000546073 ZNF436Q9C0F3 470 aaPredicted RBP13.36□□□□□ -0.27
CD9-211ENST00000546073 DAZ1Q9NQZ3 744 aaKnown RBP13.36□□□□□ -0.27
CD9-211ENST00000546073 MRPL27Q9P0M9 148 aaKnown RBP13.36□□□□□ -0.27
CD9-211ENST00000546073 PFDN2Q9UHV9 154 aa13.36□□□□□ -0.27
CD9-211ENST00000546073 C2orf70A6NJV1 201 aa13.35□□□□□ -0.27
CD9-211ENST00000546073 CCSO14618 274 aa13.35□□□□□ -0.27
CD9-211ENST00000546073 TMEM50AO95807 157 aa13.35□□□□□ -0.27
CD9-211ENST00000546073 CTSGP08311 255 aa13.35□□□□□ -0.27
CD9-211ENST00000546073 FOLR2P14207 255 aa13.35□□□□□ -0.27
CD9-211ENST00000546073 BCAP31P51572 246 aa13.35□□□□□ -0.27
CD9-211ENST00000546073 RND2P52198 227 aa13.35□□□□□ -0.27
CD9-211ENST00000546073 TAS2R30P59541 319 aa13.35□□□□□ -0.27
CD9-211ENST00000546073 CD69Q07108 199 aa13.35□□□□□ -0.27
CD9-211ENST00000546073 RBPMS2Q6ZRY4 209 aaKnown RBP13.35□□□□□ -0.27
CD9-211ENST00000546073 SLC16A13Q7RTY0 426 aa13.35□□□□□ -0.27
CD9-211ENST00000546073 MRAPQ8TCY5 172 aa13.35□□□□□ -0.27
CD9-211ENST00000546073 OR10C1Q96KK4 312 aa13.35□□□□□ -0.27
CD9-211ENST00000546073 LSM5Q9Y4Y9 91 aaKnown RBP13.35□□□□□ -0.27
CD9-211ENST00000546073 C15orf62A8K5M9 175 aa13.34□□□□□ -0.27
CD9-211ENST00000546073 MPTX1A8MV57 137 aa13.34□□□□□ -0.27
CD9-211ENST00000546073 A8MWP6 167 aa13.34□□□□□ -0.27
CD9-211ENST00000546073 K7EMT4 169 aa13.34□□□□□ -0.27
CD9-211ENST00000546073 CSN3P07498 182 aa13.34□□□□□ -0.27
CD9-211ENST00000546073 CBLN1P23435 193 aa13.34□□□□□ -0.27
CD9-211ENST00000546073 S100A10P60903 97 aa13.34□□□□□ -0.27
CD9-211ENST00000546073 RGS21Q2M5E4 152 aa13.34□□□□□ -0.27
CD9-211ENST00000546073 GTSCR1Q86UQ5 136 aa13.34□□□□□ -0.27
CD9-211ENST00000546073 SMIM8Q96KF7 97 aa13.34□□□□□ -0.27
CD9-211ENST00000546073 CHRDL1Q9BU40 450 aa13.34□□□□□ -0.27
CD9-211ENST00000546073 TMEM231Q9H6L2 316 aa13.34□□□□□ -0.27
CD9-211ENST00000546073 TRAV14DV4A0A0A6YYC5 116 aa13.33□□□□□ -0.28
CD9-211ENST00000546073 ZFP92A6NM28 416 aa13.33□□□□□ -0.28
CD9-211ENST00000546073 GOSR2O14653 212 aa13.33□□□□□ -0.28
CD9-211ENST00000546073 IGLV1-51P01701 117 aa13.33□□□□□ -0.28
CD9-211ENST00000546073 OR10J1P30954 320 aa13.33□□□□□ -0.28
CD9-211ENST00000546073 S100A7P31151 101 aa13.33□□□□□ -0.28
CD9-211ENST00000546073 TMEM116Q8NCL8 245 aa13.33□□□□□ -0.28
CD9-211ENST00000546073 OR10P1Q8NGE3 313 aa13.33□□□□□ -0.28
CD9-211ENST00000546073 TMEM190Q8WZ59 177 aa13.33□□□□□ -0.28
CD9-211ENST00000546073 NPIPB3Q92617 1050 aa13.33□□□□□ -0.28
CD9-211ENST00000546073 AURKAIP1Q9NWT8 199 aaPredicted RBP13.33□□□□□ -0.28
CD9-211ENST00000546073 A0A1W2PS18 150 aa13.32□□□□□ -0.28
CD9-211ENST00000546073 H3BP45 60 aa13.32□□□□□ -0.28
CD9-211ENST00000546073 TSC22D2O75157 780 aa13.32□□□□□ -0.28
CD9-211ENST00000546073 CD5P06127 495 aa13.32□□□□□ -0.28
CD9-211ENST00000546073 GP9P14770 177 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms