RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 RNF183Q96D59 192 aa16.8■□□□□ 0.28
CHD4-214ENST00000545942 DIRAS2Q96HU8 199 aa16.8■□□□□ 0.28
CHD4-214ENST00000545942 RTBDNQ9BSG5 229 aaPredicted RBP16.8■□□□□ 0.28
CHD4-214ENST00000545942 RABL2AQ9UBK7 228 aaPredicted RBP16.8■□□□□ 0.28
CHD4-214ENST00000545942 RABL2BQ9UNT1 228 aa16.8■□□□□ 0.28
CHD4-214ENST00000545942 CTDSPLO15194 276 aa16.79■□□□□ 0.28
CHD4-214ENST00000545942 AKAIN1P0CW23 69 aa16.79■□□□□ 0.28
CHD4-214ENST00000545942 OPRK1P41145 380 aa16.79■□□□□ 0.28
CHD4-214ENST00000545942 SPCS3P61009 180 aa16.79■□□□□ 0.28
CHD4-214ENST00000545942 IL18Q14116 193 aa16.79■□□□□ 0.28
CHD4-214ENST00000545942 AARDQ4LEZ3 155 aa16.79■□□□□ 0.28
CHD4-214ENST00000545942 Q6ZRM9 215 aa16.79■□□□□ 0.28
CHD4-214ENST00000545942 TCF24Q7RTU0 167 aa16.79■□□□□ 0.28
CHD4-214ENST00000545942 GBGT1Q8N5D6 347 aa16.79■□□□□ 0.28
CHD4-214ENST00000545942 GLYATL2Q8WU03 294 aa16.79■□□□□ 0.28
CHD4-214ENST00000545942 ST8SIA2Q92186 375 aa16.79■□□□□ 0.28
CHD4-214ENST00000545942 RBPMSQ93062 196 aaKnown RBP16.79■□□□□ 0.28
CHD4-214ENST00000545942 VSIRQ9H7M9 311 aa16.79■□□□□ 0.28
CHD4-214ENST00000545942 NAA60Q9H7X0 242 aa16.79■□□□□ 0.28
CHD4-214ENST00000545942 ZFAND3Q9H8U3 227 aa16.79■□□□□ 0.28
CHD4-214ENST00000545942 CCDC59Q9P031 241 aaKnown RBP16.79■□□□□ 0.28
CHD4-214ENST00000545942 RPL5P46777 297 aaKnown RBP16.78■□□□□ 0.28
CHD4-214ENST00000545942 DHODHQ02127 395 aa16.78■□□□□ 0.28
CHD4-214ENST00000545942 BSXQ3C1V8 233 aa16.78■□□□□ 0.28
CHD4-214ENST00000545942 OR4C16Q8NGL9 310 aa16.78■□□□□ 0.28
CHD4-214ENST00000545942 OR52E5Q8NH55 327 aa16.78■□□□□ 0.28
CHD4-214ENST00000545942 DYNC2LI1Q8TCX1 351 aa16.78■□□□□ 0.28
CHD4-214ENST00000545942 FNDC4Q9H6D8 234 aaPredicted RBP16.78■□□□□ 0.28
CHD4-214ENST00000545942 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.78■□□□□ 0.28
CHD4-214ENST00000545942 A0A1B0GU03 582 aa16.77■□□□□ 0.28
CHD4-214ENST00000545942 CLN5O75503 358 aa16.77■□□□□ 0.28
CHD4-214ENST00000545942 SCGB2A1O75556 95 aa16.77■□□□□ 0.28
CHD4-214ENST00000545942 ZNF124Q15973 351 aa16.77■□□□□ 0.28
CHD4-214ENST00000545942 OR4X1Q8NH49 305 aa16.77■□□□□ 0.28
CHD4-214ENST00000545942 LHFPL5Q8TAF8 219 aa16.77■□□□□ 0.28
CHD4-214ENST00000545942 PRRT1Q99946 306 aa16.77■□□□□ 0.28
CHD4-214ENST00000545942 BCL7BQ9BQE9 202 aa16.77■□□□□ 0.28
CHD4-214ENST00000545942 GPR132Q9UNW8 380 aa16.77■□□□□ 0.28
CHD4-214ENST00000545942 CXorf65A6NEN9 183 aa16.76■□□□□ 0.27
CHD4-214ENST00000545942 APOHP02749 345 aaPredicted RBP16.76■□□□□ 0.27
CHD4-214ENST00000545942 TMBIM6P55061 237 aa16.76■□□□□ 0.27
CHD4-214ENST00000545942 SELENOHQ8IZQ5 122 aaKnown RBP16.76■□□□□ 0.27
CHD4-214ENST00000545942 CSTL1Q9H114 145 aa16.76■□□□□ 0.27
CHD4-214ENST00000545942 TMEM231Q9H6L2 316 aa16.76■□□□□ 0.27
CHD4-214ENST00000545942 MRPL36Q9P0J6 103 aaKnown RBP16.76■□□□□ 0.27
CHD4-214ENST00000545942 IGHV3-66A0A0C4DH42 116 aa16.75■□□□□ 0.27
CHD4-214ENST00000545942 CRYM-AS1A6NIL9 109 aa16.75■□□□□ 0.27
CHD4-214ENST00000545942 DFFBO76075 338 aa16.75■□□□□ 0.27
CHD4-214ENST00000545942 NPPCP23582 126 aa16.75■□□□□ 0.27
CHD4-214ENST00000545942 HTR2BP41595 481 aa16.75■□□□□ 0.27
CHD4-214ENST00000545942 EWSR1Q01844 656 aaKnown RBP eCLIP16.75■□□□□ 0.27
CHD4-214ENST00000545942 PMS2P11Q13670 270 aa16.75■□□□□ 0.27
CHD4-214ENST00000545942 MLANAQ16655 118 aa16.75■□□□□ 0.27
CHD4-214ENST00000545942 TMEM268Q5VZI3 342 aa16.75■□□□□ 0.27
CHD4-214ENST00000545942 LILRB2Q8N423 598 aa16.75■□□□□ 0.27
CHD4-214ENST00000545942 OR51S1Q8NGJ8 323 aa16.75■□□□□ 0.27
CHD4-214ENST00000545942 MS4A6AQ9H2W1 248 aa16.75■□□□□ 0.27
CHD4-214ENST00000545942 MPTX1A8MV57 137 aa16.74■□□□□ 0.27
CHD4-214ENST00000545942 DNASE2O00115 360 aaPredicted RBP16.74■□□□□ 0.27
CHD4-214ENST00000545942 ATF4P18848 351 aaPredicted RBP16.74■□□□□ 0.27
CHD4-214ENST00000545942 RPL11P62913 178 aaKnown RBP16.74■□□□□ 0.27
CHD4-214ENST00000545942 HEYLQ9NQ87 328 aaPredicted RBP16.74■□□□□ 0.27
CHD4-214ENST00000545942 CACNG5Q9UF02 275 aa16.74■□□□□ 0.27
CHD4-214ENST00000545942 HYDINQ4G0P3 5121 aa16.74■□□□□ 0.27
CHD4-214ENST00000545942 TRAV2A0A0B4J234 112 aa16.73■□□□□ 0.27
CHD4-214ENST00000545942 RPS10-NUDT3A0A1W2PQS6 291 aa16.73■□□□□ 0.27
CHD4-214ENST00000545942 A0A1W2PS18 150 aa16.73■□□□□ 0.27
CHD4-214ENST00000545942 ANKRD20A5PA0PJZ0 165 aa16.73■□□□□ 0.27
CHD4-214ENST00000545942 NUPR2A6NF83 97 aa16.73■□□□□ 0.27
CHD4-214ENST00000545942 GSTZ1O43708 216 aaPredicted RBP16.73■□□□□ 0.27
CHD4-214ENST00000545942 TMEM217Q8N7C4 229 aa16.73■□□□□ 0.27
CHD4-214ENST00000545942 TMEM230Q96A57 120 aa16.73■□□□□ 0.27
CHD4-214ENST00000545942 GPR146Q96CH1 333 aa16.73■□□□□ 0.27
CHD4-214ENST00000545942 METTL26Q96S19 204 aa16.73■□□□□ 0.27
CHD4-214ENST00000545942 RSL24D1Q9UHA3 163 aaKnown RBP16.73■□□□□ 0.27
CHD4-214ENST00000545942 TMEM56-RWDD3S4R434 201 aa16.73■□□□□ 0.27
CHD4-214ENST00000545942 TRAV30A0A087WSZ9 112 aa16.72■□□□□ 0.27
CHD4-214ENST00000545942 C2orf83Q53S99 150 aa16.72■□□□□ 0.27
CHD4-214ENST00000545942 SCP2D1Q9UJQ7 156 aa16.72■□□□□ 0.27
CHD4-214ENST00000545942 CEBPZOSA8MTT3 80 aa16.71■□□□□ 0.27
CHD4-214ENST00000545942 NOL3O60936 208 aaKnown RBP16.71■□□□□ 0.27
CHD4-214ENST00000545942 IGKV1-17P01599 117 aa16.71■□□□□ 0.27
CHD4-214ENST00000545942 CRYBB3P26998 211 aa16.71■□□□□ 0.27
CHD4-214ENST00000545942 GATAD1Q8WUU5 269 aa16.71■□□□□ 0.27
CHD4-214ENST00000545942 CACFD1Q9UGQ2 172 aa16.71■□□□□ 0.27
CHD4-214ENST00000545942 KCNIP3Q9Y2W7 256 aa16.71■□□□□ 0.27
CHD4-214ENST00000545942 DEFB131AP59861 70 aa16.7■□□□□ 0.26
CHD4-214ENST00000545942 TIGITQ495A1 244 aa16.7■□□□□ 0.26
CHD4-214ENST00000545942 SLC24A4Q8NFF2 622 aa16.7■□□□□ 0.26
CHD4-214ENST00000545942 RNASEH2CQ8TDP1 164 aaKnown RBP16.7■□□□□ 0.26
CHD4-214ENST00000545942 IL22RA2Q969J5 263 aa16.7■□□□□ 0.26
CHD4-214ENST00000545942 NARS2Q96I59 477 aaKnown RBP16.7■□□□□ 0.26
CHD4-214ENST00000545942 SCGB3A2Q96PL1 93 aa16.7■□□□□ 0.26
CHD4-214ENST00000545942 SLIRPQ9GZT3 109 aaKnown RBP16.7■□□□□ 0.26
CHD4-214ENST00000545942 RABAC1Q9UI14 185 aa16.7■□□□□ 0.26
CHD4-214ENST00000545942 SLC25A4P12235 298 aa16.7■□□□□ 0.26
CHD4-214ENST00000545942 TMEM187Q14656 261 aa16.7■□□□□ 0.26
CHD4-214ENST00000545942 LEMD1Q68G75 181 aa16.7■□□□□ 0.26
CHD4-214ENST00000545942 CEMP1Q6PRD7 247 aaPredicted RBP16.7■□□□□ 0.26
CHD4-214ENST00000545942 RARRES2Q99969 163 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms