RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 TRAV3A0A0B4J244 114 aa5.25□□□□□ -1.57
SNHG1-225ENST00000545920 TEX50A0A1B0GTY4 177 aa5.25□□□□□ -1.57
SNHG1-225ENST00000545920 TCRBV4S1A1TA0A5B7 111 aa5.25□□□□□ -1.57
SNHG1-225ENST00000545920 PSMB11A5LHX3 300 aa5.25□□□□□ -1.57
SNHG1-225ENST00000545920 PGPEP1LA6NFU8 196 aa5.25□□□□□ -1.57
SNHG1-225ENST00000545920 A8MWL6 223 aa5.25□□□□□ -1.57
SNHG1-225ENST00000545920 GGTLC3B5MD39 225 aa5.25□□□□□ -1.57
SNHG1-225ENST00000545920 SLC17A3O00476 420 aa5.25□□□□□ -1.57
SNHG1-225ENST00000545920 PEX7O00628 323 aa5.25□□□□□ -1.57
SNHG1-225ENST00000545920 CRXO43186 299 aaPredicted RBP5.25□□□□□ -1.57
SNHG1-225ENST00000545920 COX7A2P2O60397 106 aa5.25□□□□□ -1.57
SNHG1-225ENST00000545920 IGLV2-8P01709 118 aa5.25□□□□□ -1.57
SNHG1-225ENST00000545920 TNFRSF1AP19438 455 aa5.25□□□□□ -1.57
SNHG1-225ENST00000545920 MC5RP33032 325 aa5.25□□□□□ -1.57
SNHG1-225ENST00000545920 LGALS7P47929 136 aa5.25□□□□□ -1.57
SNHG1-225ENST00000545920 HNRNPA3P51991 378 aaKnown RBP5.25□□□□□ -1.57
SNHG1-225ENST00000545920 ZNF134P52741 427 aa5.25□□□□□ -1.57
SNHG1-225ENST00000545920 ZNF137PP52743 207 aa5.25□□□□□ -1.57
SNHG1-225ENST00000545920 KRTDAPP60985 99 aa5.25□□□□□ -1.57
SNHG1-225ENST00000545920 RPL8P62917 257 aaKnown RBP5.25□□□□□ -1.57
SNHG1-225ENST00000545920 UBE2L3P68036 154 aaKnown RBP5.25□□□□□ -1.57
SNHG1-225ENST00000545920 OR5I1Q13606 314 aa5.25□□□□□ -1.57
SNHG1-225ENST00000545920 PRSS8Q16651 343 aa5.25□□□□□ -1.57
SNHG1-225ENST00000545920 SPATA45Q537H7 98 aa5.25□□□□□ -1.57
SNHG1-225ENST00000545920 PSMG4Q5JS54 123 aa5.25□□□□□ -1.57
SNHG1-225ENST00000545920 KHDC1LQ5JSQ8 128 aa5.25□□□□□ -1.57
SNHG1-225ENST00000545920 SPATA31B1PQ5VZV4 182 aa5.25□□□□□ -1.57
SNHG1-225ENST00000545920 ZNF788Q6ZQV5 615 aa5.25□□□□□ -1.57
SNHG1-225ENST00000545920 ASCL5Q7RTU5 278 aa5.25□□□□□ -1.57
SNHG1-225ENST00000545920 LYG1Q8N1E2 194 aa5.25□□□□□ -1.57
SNHG1-225ENST00000545920 TMEM105Q8N8V8 129 aa5.25□□□□□ -1.57
SNHG1-225ENST00000545920 Q8N976 141 aa5.25□□□□□ -1.57
SNHG1-225ENST00000545920 C9orf106Q8NAJ2 232 aa5.25□□□□□ -1.57
SNHG1-225ENST00000545920 NHLRC2Q8NBF2 726 aa5.25□□□□□ -1.57
SNHG1-225ENST00000545920 NUP37Q8NFH4 326 aa5.25□□□□□ -1.57
SNHG1-225ENST00000545920 OR4C13Q8NGP0 309 aa5.25□□□□□ -1.57
SNHG1-225ENST00000545920 TNFRSF14Q92956 283 aa5.25□□□□□ -1.57
SNHG1-225ENST00000545920 TMEM186Q96B77 213 aa5.25□□□□□ -1.57
SNHG1-225ENST00000545920 PERPQ96FX8 193 aa5.25□□□□□ -1.57
SNHG1-225ENST00000545920 FMC1Q96HJ9 113 aa5.25□□□□□ -1.57
SNHG1-225ENST00000545920 FAM167A-AS1Q96KT0 104 aa5.25□□□□□ -1.57
SNHG1-225ENST00000545920 TXN2Q99757 166 aa5.25□□□□□ -1.57
SNHG1-225ENST00000545920 SRSF8Q9BRL6 282 aaKnown RBP5.25□□□□□ -1.57
SNHG1-225ENST00000545920 PAXXQ9BUH6 204 aa5.25□□□□□ -1.57
SNHG1-225ENST00000545920 ST20Q9HBF5 79 aa5.25□□□□□ -1.57
SNHG1-225ENST00000545920 IL17BQ9UHF5 180 aa5.25□□□□□ -1.57
SNHG1-225ENST00000545920 LAMTOR2Q9Y2Q5 125 aa5.25□□□□□ -1.57
SNHG1-225ENST00000545920 PAM16Q9Y3D7 125 aa5.25□□□□□ -1.57
SNHG1-225ENST00000545920 IGHV2-26A0A0B4J1V2 119 aa5.24□□□□□ -1.57
SNHG1-225ENST00000545920 A0A1B0GXF2 115 aa5.24□□□□□ -1.57
SNHG1-225ENST00000545920 A0A1W2PNU3 283 aaPredicted RBP5.24□□□□□ -1.57
SNHG1-225ENST00000545920 HSBP1O75506 76 aa5.24□□□□□ -1.57
SNHG1-225ENST00000545920 FOXH1O75593 365 aa5.24□□□□□ -1.57
SNHG1-225ENST00000545920 TOMM40O96008 361 aa5.24□□□□□ -1.57
SNHG1-225ENST00000545920 C3orf79P0CE67 100 aa5.24□□□□□ -1.57
SNHG1-225ENST00000545920 CT45A6P0DMU7 189 aa5.24□□□□□ -1.57
SNHG1-225ENST00000545920 CT45A5P0DMU8 189 aa5.24□□□□□ -1.57
SNHG1-225ENST00000545920 CT45A7P0DMV0 189 aa5.24□□□□□ -1.57
SNHG1-225ENST00000545920 DEFA4P12838 97 aa5.24□□□□□ -1.57
SNHG1-225ENST00000545920 SRIP30626 198 aa5.24□□□□□ -1.57
SNHG1-225ENST00000545920 ZNF83P51522 516 aa5.24□□□□□ -1.57
SNHG1-225ENST00000545920 PLP1P60201 277 aa5.24□□□□□ -1.57
SNHG1-225ENST00000545920 RPS16P62249 146 aaKnown RBP5.24□□□□□ -1.57
SNHG1-225ENST00000545920 MMDQ15546 238 aa5.24□□□□□ -1.57
SNHG1-225ENST00000545920 VMA21Q3ZAQ7 101 aa5.24□□□□□ -1.57
SNHG1-225ENST00000545920 PRR31Q5SQ13 230 aa5.24□□□□□ -1.57
SNHG1-225ENST00000545920 HES3Q5TGS1 186 aa5.24□□□□□ -1.57
SNHG1-225ENST00000545920 C10orf113Q5VZT2 155 aa5.24□□□□□ -1.57
SNHG1-225ENST00000545920 MOGAT3Q86VF5 341 aa5.24□□□□□ -1.57
SNHG1-225ENST00000545920 NIT1Q86X76 327 aa5.24□□□□□ -1.57
SNHG1-225ENST00000545920 ZCCHC24Q8N2G6 241 aaKnown RBP5.24□□□□□ -1.57
SNHG1-225ENST00000545920 TPRX1Q8N7U7 411 aa5.24□□□□□ -1.57
SNHG1-225ENST00000545920 OR8B3Q8NGG8 313 aa5.24□□□□□ -1.57
SNHG1-225ENST00000545920 C18orf32Q8TCD1 76 aa5.24□□□□□ -1.57
SNHG1-225ENST00000545920 FLYWCH2Q96CP2 140 aaKnown RBP5.24□□□□□ -1.57
SNHG1-225ENST00000545920 ZNF503Q96F45 646 aa5.24□□□□□ -1.57
SNHG1-225ENST00000545920 GPR82Q96P67 336 aa5.24□□□□□ -1.57
SNHG1-225ENST00000545920 GAFA1Q96PS6 74 aa5.24□□□□□ -1.57
SNHG1-225ENST00000545920 OR8B2Q96RD0 313 aa5.24□□□□□ -1.57
SNHG1-225ENST00000545920 TRGV9Q99603 122 aa5.24□□□□□ -1.57
SNHG1-225ENST00000545920 PMCHL2Q9BQD1 86 aa5.24□□□□□ -1.57
SNHG1-225ENST00000545920 ARRDC1-AS1Q9H2J1 176 aa5.24□□□□□ -1.57
SNHG1-225ENST00000545920 GCM1Q9NP62 436 aa5.24□□□□□ -1.57
SNHG1-225ENST00000545920 IGHV1-69-2A0A0G2JMI3 117 aa5.23□□□□□ -1.57
SNHG1-225ENST00000545920 H0YJW9 148 aa5.23□□□□□ -1.57
SNHG1-225ENST00000545920 ZNHIT1O43257 154 aa5.23□□□□□ -1.57
SNHG1-225ENST00000545920 HYPMO75409 117 aa5.23□□□□□ -1.57
SNHG1-225ENST00000545920 CEACAM4O75871 244 aa5.23□□□□□ -1.57
SNHG1-225ENST00000545920 AGFG2O95081 481 aa5.23□□□□□ -1.57
SNHG1-225ENST00000545920 HLA-DRB1P01911 266 aa5.23□□□□□ -1.57
SNHG1-225ENST00000545920 CRYGCP07315 174 aa5.23□□□□□ -1.57
SNHG1-225ENST00000545920 SAA1P0DJI8 122 aaPredicted RBP5.23□□□□□ -1.57
SNHG1-225ENST00000545920 MGST1P10620 155 aaKnown RBP5.23□□□□□ -1.57
SNHG1-225ENST00000545920 CHRNB4P30926 498 aa5.23□□□□□ -1.57
SNHG1-225ENST00000545920 CDKN1AP38936 164 aa5.23□□□□□ -1.57
SNHG1-225ENST00000545920 MYCNOSP40205 109 aa5.23□□□□□ -1.57
SNHG1-225ENST00000545920 UBE2G1P62253 170 aa5.23□□□□□ -1.57
SNHG1-225ENST00000545920 HBBP68871 147 aa5.23□□□□□ -1.57
SNHG1-225ENST00000545920 TNFAIP6P98066 277 aaPredicted RBP5.23□□□□□ -1.57
SNHG1-225ENST00000545920 LTC4SQ16873 150 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms