RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-222ENST00000544585 CBLN1P23435 193 aa4.42□□□□□ -1.7
CPSF7-222ENST00000544585 FASP25445 335 aa4.42□□□□□ -1.7
CPSF7-222ENST00000544585 ZNF45Q02386 682 aa4.42□□□□□ -1.7
CPSF7-222ENST00000544585 GLT8D1Q68CQ7 371 aa4.42□□□□□ -1.7
CPSF7-222ENST00000544585 LHFPL3Q86UP9 236 aa4.42□□□□□ -1.7
CPSF7-222ENST00000544585 PDPNQ86YL7 162 aa4.42□□□□□ -1.7
CPSF7-222ENST00000544585 GPHB5Q86YW7 130 aa4.42□□□□□ -1.7
CPSF7-222ENST00000544585 OR1L6Q8NGR2 347 aa4.42□□□□□ -1.7
CPSF7-222ENST00000544585 GRPEL2Q8TAA5 225 aa4.42□□□□□ -1.7
CPSF7-222ENST00000544585 CENPNQ96H22 339 aaPredicted RBP4.42□□□□□ -1.7
CPSF7-222ENST00000544585 C9orf16Q9BUW7 83 aa4.42□□□□□ -1.7
CPSF7-222ENST00000544585 PARP12Q9H0J9 701 aaKnown RBP4.42□□□□□ -1.7
CPSF7-222ENST00000544585 SCRT2Q9NQ03 307 aa4.42□□□□□ -1.7
CPSF7-222ENST00000544585 TAS2R4Q9NYW5 299 aa4.42□□□□□ -1.7
CPSF7-222ENST00000544585 A0A087WXM4 84 aa4.41□□□□□ -1.7
CPSF7-222ENST00000544585 KIR2DL5BA0A0G2JN68 375 aa4.41□□□□□ -1.7
CPSF7-222ENST00000544585 KIR2DL5BA0A0G2JPC4 375 aa4.41□□□□□ -1.7
CPSF7-222ENST00000544585 CCDC160A6NGH7 325 aa4.41□□□□□ -1.7
CPSF7-222ENST00000544585 C2orf70A6NJV1 201 aa4.41□□□□□ -1.7
CPSF7-222ENST00000544585 FAM223BA6NKX1 122 aa4.41□□□□□ -1.7
CPSF7-222ENST00000544585 TRDCB7Z8K6 153 aa4.41□□□□□ -1.7
CPSF7-222ENST00000544585 ZNF701M0R085 212 aaPredicted RBP4.41□□□□□ -1.7
CPSF7-222ENST00000544585 GGCTO75223 188 aaKnown RBP4.41□□□□□ -1.7
CPSF7-222ENST00000544585 TRBV12-3P01733 135 aa4.41□□□□□ -1.7
CPSF7-222ENST00000544585 APOA2P02652 100 aa4.41□□□□□ -1.7
CPSF7-222ENST00000544585 STAG3L3P0CL85 134 aa4.41□□□□□ -1.7
CPSF7-222ENST00000544585 POLR2IP36954 125 aaKnown RBP4.41□□□□□ -1.7
CPSF7-222ENST00000544585 CEACAM6P40199 344 aa4.41□□□□□ -1.7
CPSF7-222ENST00000544585 RANBP1P43487 201 aa4.41□□□□□ -1.7
CPSF7-222ENST00000544585 PLP1P60201 277 aa4.41□□□□□ -1.7
CPSF7-222ENST00000544585 SNRPGP62308 76 aaKnown RBP4.41□□□□□ -1.7
CPSF7-222ENST00000544585 CD300CQ08708 224 aa4.41□□□□□ -1.7
CPSF7-222ENST00000544585 GNMTQ14749 295 aa4.41□□□□□ -1.7
CPSF7-222ENST00000544585 HMGN3Q15651 99 aa4.41□□□□□ -1.7
CPSF7-222ENST00000544585 CCDC58Q4VC31 144 aa4.41□□□□□ -1.7
CPSF7-222ENST00000544585 RPL39P5Q59GN2 51 aa4.41□□□□□ -1.7
CPSF7-222ENST00000544585 RPL22L1Q6P5R6 122 aaKnown RBP4.41□□□□□ -1.7
CPSF7-222ENST00000544585 GLIPR1L1Q6UWM5 242 aa4.41□□□□□ -1.7
CPSF7-222ENST00000544585 FAM223AQ8IWN6 122 aa4.41□□□□□ -1.7
CPSF7-222ENST00000544585 KIR2DL5AQ8N109 375 aa4.41□□□□□ -1.7
CPSF7-222ENST00000544585 KIR2DL5BQ8NHK3 375 aa4.41□□□□□ -1.7
CPSF7-222ENST00000544585 MRPL30Q8TCC3 161 aaKnown RBP4.41□□□□□ -1.7
CPSF7-222ENST00000544585 PHB2Q99623 299 aa4.41□□□□□ -1.7
CPSF7-222ENST00000544585 AGMATQ9BSE5 352 aa4.41□□□□□ -1.7
CPSF7-222ENST00000544585 YTHDF1Q9BYJ9 559 aaKnown RBP4.41□□□□□ -1.7
CPSF7-222ENST00000544585 SELENOIQ9C0D9 397 aa4.41□□□□□ -1.7
CPSF7-222ENST00000544585 WFDC10AQ9H1F0 79 aa4.41□□□□□ -1.7
CPSF7-222ENST00000544585 IFI27L2Q9H2X8 130 aa4.41□□□□□ -1.7
CPSF7-222ENST00000544585 ISG20L2Q9H9L3 353 aaKnown RBP4.41□□□□□ -1.7
CPSF7-222ENST00000544585 RSL24D1Q9UHA3 163 aaKnown RBP4.41□□□□□ -1.7
CPSF7-222ENST00000544585 KIAA1109Q2LD37 5005 aa4.41□□□□□ -1.7
CPSF7-222ENST00000544585 ALMS1Q8TCU4 4167 aa4.4□□□□□ -1.7
CPSF7-222ENST00000544585 TRBV9A0A0B4J1U6 114 aa4.4□□□□□ -1.71
CPSF7-222ENST00000544585 MGMTP16455 207 aa4.4□□□□□ -1.71
CPSF7-222ENST00000544585 ZBTB25P24278 435 aa4.4□□□□□ -1.71
CPSF7-222ENST00000544585 LEPP41159 167 aa4.4□□□□□ -1.71
CPSF7-222ENST00000544585 RHOGP84095 191 aa4.4□□□□□ -1.71
CPSF7-222ENST00000544585 ATP6AP1Q15904 470 aa4.4□□□□□ -1.71
CPSF7-222ENST00000544585 SLC25A42Q86VD7 318 aa4.4□□□□□ -1.71
CPSF7-222ENST00000544585 NECAP1Q8NC96 275 aa4.4□□□□□ -1.71
CPSF7-222ENST00000544585 OR4C5Q8NGB2 326 aa4.4□□□□□ -1.71
CPSF7-222ENST00000544585 MARC2Q969Z3 335 aa4.4□□□□□ -1.71
CPSF7-222ENST00000544585 PTX4Q96A99 478 aa4.4□□□□□ -1.71
CPSF7-222ENST00000544585 PPP1R14BQ96C90 147 aa4.4□□□□□ -1.71
CPSF7-222ENST00000544585 ABHD14BQ96IU4 210 aa4.4□□□□□ -1.71
CPSF7-222ENST00000544585 Q96MT0 163 aa4.4□□□□□ -1.71
CPSF7-222ENST00000544585 CIB1Q99828 191 aa4.4□□□□□ -1.71
CPSF7-222ENST00000544585 GABARAPL3Q9BY60 117 aa4.4□□□□□ -1.71
CPSF7-222ENST00000544585 GABARAPL1Q9H0R8 117 aa4.4□□□□□ -1.71
CPSF7-222ENST00000544585 CKLFQ9UBR5 152 aa4.4□□□□□ -1.71
CPSF7-222ENST00000544585 CSDC2Q9Y534 153 aaKnown RBP4.4□□□□□ -1.71
CPSF7-222ENST00000544585 A0A1B0GVY2 172 aa4.39□□□□□ -1.71
CPSF7-222ENST00000544585 C11orf94C9JXX5 98 aa4.39□□□□□ -1.71
CPSF7-222ENST00000544585 SLC17A2O00624 439 aa4.39□□□□□ -1.71
CPSF7-222ENST00000544585 PDCD6O75340 191 aa4.39□□□□□ -1.71
CPSF7-222ENST00000544585 CRTAPO75718 401 aaPredicted RBP4.39□□□□□ -1.71
CPSF7-222ENST00000544585 IGLV2-23P01705 113 aa4.39□□□□□ -1.71
CPSF7-222ENST00000544585 IGKV1-16P04430 117 aa4.39□□□□□ -1.71
CPSF7-222ENST00000544585 SCTP09683 121 aa4.39□□□□□ -1.71
CPSF7-222ENST00000544585 IGFBP3P17936 291 aaPredicted RBP4.39□□□□□ -1.71
CPSF7-222ENST00000544585 CMC4P56277 68 aaPredicted RBP4.39□□□□□ -1.71
CPSF7-222ENST00000544585 TPBGQ13641 420 aa4.39□□□□□ -1.71
CPSF7-222ENST00000544585 DEFB135Q30KP9 77 aa4.39□□□□□ -1.71
CPSF7-222ENST00000544585 LEMD1Q68G75 181 aa4.39□□□□□ -1.71
CPSF7-222ENST00000544585 ZNF880Q6PDB4 577 aa4.39□□□□□ -1.71
CPSF7-222ENST00000544585 TMEM61Q8N0U2 210 aa4.39□□□□□ -1.71
CPSF7-222ENST00000544585 CBR4Q8N4T8 237 aa4.39□□□□□ -1.71
CPSF7-222ENST00000544585 TTC9CQ8N5M4 171 aa4.39□□□□□ -1.71
CPSF7-222ENST00000544585 JAGN1Q8N5M9 183 aa4.39□□□□□ -1.71
CPSF7-222ENST00000544585 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.39□□□□□ -1.71
CPSF7-222ENST00000544585 BPIFCQ8NFQ6 507 aa4.39□□□□□ -1.71
CPSF7-222ENST00000544585 GALNT14Q96FL9 552 aa4.39□□□□□ -1.71
CPSF7-222ENST00000544585 LINC00479Q96M42 142 aa4.39□□□□□ -1.71
CPSF7-222ENST00000544585 RNF2Q99496 336 aa4.39□□□□□ -1.71
CPSF7-222ENST00000544585 SLC29A1Q99808 456 aa4.39□□□□□ -1.71
CPSF7-222ENST00000544585 C6orf62Q9GZU0 229 aaPredicted RBP4.39□□□□□ -1.71
CPSF7-222ENST00000544585 BANF2Q9H503 90 aa4.39□□□□□ -1.71
CPSF7-222ENST00000544585 MRPL27Q9P0M9 148 aaKnown RBP4.39□□□□□ -1.71
CPSF7-222ENST00000544585 ZNF230Q9UIE0 474 aaPredicted RBP4.39□□□□□ -1.71
CPSF7-222ENST00000544585 FRAS1Q86XX4 4008 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms