RNA–Protein interactions for RNA: ENST00000544349.5

VPS33A-209, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS33A, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-209ENST00000544349 POLR3KQ9Y2Y1 108 aaPredicted RBP11.48□□□□□ -0.57
VPS33A-209ENST00000544349 YTHDF2Q9Y5A9 579 aaKnown RBP11.48□□□□□ -0.57
VPS33A-209ENST00000544349 MYO18BQ8IUG5 2567 aa11.48□□□□□ -0.57
VPS33A-209ENST00000544349 IGHV4-61A0A0C4DH41 118 aa11.47□□□□□ -0.57
VPS33A-209ENST00000544349 SCO2A0A1W2PP80 73 aa11.47□□□□□ -0.57
VPS33A-209ENST00000544349 PPP1R2P9O14990 202 aa11.47□□□□□ -0.57
VPS33A-209ENST00000544349 SLC25A17O43808 307 aa11.47□□□□□ -0.57
VPS33A-209ENST00000544349 NDUFS6O75380 124 aaKnown RBP11.47□□□□□ -0.57
VPS33A-209ENST00000544349 TOX4O94842 621 aa11.47□□□□□ -0.57
VPS33A-209ENST00000544349 PAX1P15863 534 aa11.47□□□□□ -0.57
VPS33A-209ENST00000544349 CHRNA7P36544 502 aa11.47□□□□□ -0.57
VPS33A-209ENST00000544349 OR10D4PQ8NGN7 298 aa11.47□□□□□ -0.57
VPS33A-209ENST00000544349 COMMD5Q9GZQ3 224 aa11.47□□□□□ -0.57
VPS33A-209ENST00000544349 OR51M1Q9H341 326 aa11.47□□□□□ -0.57
VPS33A-209ENST00000544349 SRD5A3Q9H8P0 318 aa11.47□□□□□ -0.57
VPS33A-209ENST00000544349 NPVFQ9HCQ7 196 aa11.47□□□□□ -0.57
VPS33A-209ENST00000544349 KCNIP2Q9NS61 270 aa11.47□□□□□ -0.57
VPS33A-209ENST00000544349 GAR1Q9NY12 217 aaKnown RBP11.47□□□□□ -0.57
VPS33A-209ENST00000544349 HILPDAQ9Y5L2 63 aa11.47□□□□□ -0.57
VPS33A-209ENST00000544349 UBR5O95071 2799 aaPredicted RBP11.47□□□□□ -0.57
VPS33A-209ENST00000544349 A0A1W2PRD5 423 aa11.47□□□□□ -0.57
VPS33A-209ENST00000544349 A0A1W2PRF3 423 aa11.47□□□□□ -0.57
VPS33A-209ENST00000544349 A0A1W2PRM7 423 aa11.47□□□□□ -0.57
VPS33A-209ENST00000544349 TEX45Q8NA69 505 aa11.47□□□□□ -0.57
VPS33A-209ENST00000544349 OR1L8Q8NGR8 309 aa11.47□□□□□ -0.57
VPS33A-209ENST00000544349 TBX15Q96SF7 602 aa11.47□□□□□ -0.57
VPS33A-209ENST00000544349 ZNF430Q9H8G1 570 aaPredicted RBP11.47□□□□□ -0.57
VPS33A-209ENST00000544349 NDUFA4L2Q9NRX3 87 aa11.47□□□□□ -0.57
VPS33A-209ENST00000544349 IGHV4-30-2A0A087WSY4 118 aa11.46□□□□□ -0.57
VPS33A-209ENST00000544349 TIMM23O14925 209 aa11.46□□□□□ -0.57
VPS33A-209ENST00000544349 PDE6DO43924 150 aa11.46□□□□□ -0.57
VPS33A-209ENST00000544349 VENTXO95231 258 aa11.46□□□□□ -0.57
VPS33A-209ENST00000544349 CRYGBP07316 175 aa11.46□□□□□ -0.57
VPS33A-209ENST00000544349 CNTFRP26992 372 aa11.46□□□□□ -0.57
VPS33A-209ENST00000544349 S100A2P29034 98 aa11.46□□□□□ -0.57
VPS33A-209ENST00000544349 MRGPRG-AS1Q2M3A8 158 aa11.46□□□□□ -0.57
VPS33A-209ENST00000544349 TEPPQ6URK8 271 aa11.46□□□□□ -0.57
VPS33A-209ENST00000544349 OR5B12Q96R08 314 aa11.46□□□□□ -0.57
VPS33A-209ENST00000544349 RNF5Q99942 180 aa11.46□□□□□ -0.57
VPS33A-209ENST00000544349 IGKV1OR2-108A0A075B7D4 117 aa11.45□□□□□ -0.58
VPS33A-209ENST00000544349 ELOA3CA0A087WX78 387 aaPredicted RBP11.45□□□□□ -0.58
VPS33A-209ENST00000544349 E7EUB6 86 aa11.45□□□□□ -0.58
VPS33A-209ENST00000544349 TGOLN2O43493 480 aa11.45□□□□□ -0.58
VPS33A-209ENST00000544349 RD3LP0DJH9 198 aa11.45□□□□□ -0.58
VPS33A-209ENST00000544349 COL8A1P27658 744 aa11.45□□□□□ -0.58
VPS33A-209ENST00000544349 PSG5Q15238 335 aa11.45□□□□□ -0.58
VPS33A-209ENST00000544349 PRSS8Q16651 343 aa11.45□□□□□ -0.58
VPS33A-209ENST00000544349 CFHR4Q92496 578 aa11.45□□□□□ -0.58
VPS33A-209ENST00000544349 TPSG1Q9NRR2 321 aa11.45□□□□□ -0.58
VPS33A-209ENST00000544349 PLXNB1O43157 2135 aa11.45□□□□□ -0.58
VPS33A-209ENST00000544349 CXorf1O96002 111 aa11.45□□□□□ -0.58
VPS33A-209ENST00000544349 FABP4P15090 132 aa11.45□□□□□ -0.58
VPS33A-209ENST00000544349 GCHFRP30047 84 aa11.45□□□□□ -0.58
VPS33A-209ENST00000544349 PRR20EP86478 221 aa11.45□□□□□ -0.58
VPS33A-209ENST00000544349 PRR20CP86479 221 aa11.45□□□□□ -0.58
VPS33A-209ENST00000544349 PRR20DP86480 221 aa11.45□□□□□ -0.58
VPS33A-209ENST00000544349 PRR20BP86481 221 aa11.45□□□□□ -0.58
VPS33A-209ENST00000544349 PRR20AP86496 221 aa11.45□□□□□ -0.58
VPS33A-209ENST00000544349 MINOS1Q5TGZ0 78 aa11.45□□□□□ -0.58
VPS33A-209ENST00000544349 OR10W1Q8NGF6 305 aa11.45□□□□□ -0.58
VPS33A-209ENST00000544349 LPAR2Q9HBW0 351 aa11.45□□□□□ -0.58
VPS33A-209ENST00000544349 MINOS1-NBL1R4GNA1 71 aa11.45□□□□□ -0.58
VPS33A-209ENST00000544349 MED13LQ71F56 2210 aa11.45□□□□□ -0.58
VPS33A-209ENST00000544349 CGB1A6NKQ9 187 aa11.44□□□□□ -0.58
VPS33A-209ENST00000544349 INS-IGF2F8WCM5 200 aa11.44□□□□□ -0.58
VPS33A-209ENST00000544349 GGCTO75223 188 aaKnown RBP11.44□□□□□ -0.58
VPS33A-209ENST00000544349 LINC00869P0C866 280 aa11.44□□□□□ -0.58
VPS33A-209ENST00000544349 HNF1AP20823 631 aa11.44□□□□□ -0.58
VPS33A-209ENST00000544349 S100PP25815 95 aa11.44□□□□□ -0.58
VPS33A-209ENST00000544349 MIR17HGQ75NE6 70 aa11.44□□□□□ -0.58
VPS33A-209ENST00000544349 ANAPC16Q96DE5 110 aa11.44□□□□□ -0.58
VPS33A-209ENST00000544349 SIGLEC9Q9Y336 463 aa11.44□□□□□ -0.58
VPS33A-209ENST00000544349 WNK2Q9Y3S1 2297 aa11.44□□□□□ -0.58
VPS33A-209ENST00000544349 OOSP1A8MZH6 123 aa11.44□□□□□ -0.58
VPS33A-209ENST00000544349 F6UZH7 168 aa11.44□□□□□ -0.58
VPS33A-209ENST00000544349 ACTL6BO94805 426 aa11.44□□□□□ -0.58
VPS33A-209ENST00000544349 GATA2P23769 480 aaPredicted RBP11.44□□□□□ -0.58
VPS33A-209ENST00000544349 RPL29P47914 159 aaKnown RBP11.44□□□□□ -0.58
VPS33A-209ENST00000544349 UBE2E1P51965 193 aa11.44□□□□□ -0.58
VPS33A-209ENST00000544349 ATP5IP56385 69 aaPredicted RBP11.44□□□□□ -0.58
VPS33A-209ENST00000544349 LGALS4P56470 323 aa11.44□□□□□ -0.58
VPS33A-209ENST00000544349 FAM3BP58499 235 aaPredicted RBP11.44□□□□□ -0.58
VPS33A-209ENST00000544349 DSCR9P59020 149 aa11.44□□□□□ -0.58
VPS33A-209ENST00000544349 SSX2Q16385 188 aa11.44□□□□□ -0.58
VPS33A-209ENST00000544349 MLANAQ16655 118 aa11.44□□□□□ -0.58
VPS33A-209ENST00000544349 C10orf55Q5SWW7 151 aa11.44□□□□□ -0.58
VPS33A-209ENST00000544349 FAM78BQ5VT40 261 aa11.44□□□□□ -0.58
VPS33A-209ENST00000544349 MMD2Q8IY49 270 aa11.44□□□□□ -0.58
VPS33A-209ENST00000544349 A0A1W2PN81 502 aa11.43□□□□□ -0.58
VPS33A-209ENST00000544349 PPP5D1E7EU14 171 aa11.43□□□□□ -0.58
VPS33A-209ENST00000544349 PAX8Q06710 450 aa11.43□□□□□ -0.58
VPS33A-209ENST00000544349 CCDC144NLQ6NUI1 221 aa11.43□□□□□ -0.58
VPS33A-209ENST00000544349 DYNAPQ8N1N2 210 aa11.43□□□□□ -0.58
VPS33A-209ENST00000544349 TBL2Q9Y4P3 447 aaKnown RBP11.43□□□□□ -0.58
VPS33A-209ENST00000544349 RNASE2P10153 161 aaKnown RBP11.42□□□□□ -0.58
VPS33A-209ENST00000544349 PLA2G2AP14555 144 aa11.42□□□□□ -0.58
VPS33A-209ENST00000544349 RHOBP62745 196 aa11.42□□□□□ -0.58
VPS33A-209ENST00000544349 ERHP84090 104 aaKnown RBP11.42□□□□□ -0.58
VPS33A-209ENST00000544349 C2orf83Q53S99 150 aa11.42□□□□□ -0.58
VPS33A-209ENST00000544349 ACTL10Q5JWF8 245 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms