RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 HUWE1Q7Z6Z7 4374 aaKnown RBP17.44■□□□□ 0.38
CHFR-222ENST00000544093 RPS10-NUDT3A0A1W2PQS6 291 aa17.44■□□□□ 0.38
CHFR-222ENST00000544093 BMI1P35226 326 aa17.44■□□□□ 0.38
CHFR-222ENST00000544093 OPRK1P41145 380 aa17.44■□□□□ 0.38
CHFR-222ENST00000544093 CCR6P51684 374 aa17.44■□□□□ 0.38
CHFR-222ENST00000544093 SUPT4H1P63272 117 aaKnown RBP17.44■□□□□ 0.38
CHFR-222ENST00000544093 NOXA1Q86UR1 476 aa17.44■□□□□ 0.38
CHFR-222ENST00000544093 DEFB125Q8N687 156 aa17.44■□□□□ 0.38
CHFR-222ENST00000544093 HIPK2Q9H2X6 1198 aa17.44■□□□□ 0.38
CHFR-222ENST00000544093 TRAV14DV4A0A0A6YYC5 116 aa17.43■□□□□ 0.38
CHFR-222ENST00000544093 DUXBA0A1W2PPF3 345 aa17.43■□□□□ 0.38
CHFR-222ENST00000544093 CEBPZOSA8MTT3 80 aa17.43■□□□□ 0.38
CHFR-222ENST00000544093 C3orf84H3BNL1 204 aa17.43■□□□□ 0.38
CHFR-222ENST00000544093 IGHV3-48P01763 117 aa17.43■□□□□ 0.38
CHFR-222ENST00000544093 ZNF600Q6ZNG1 722 aa17.43■□□□□ 0.38
CHFR-222ENST00000544093 SMPXQ9UHP9 88 aa17.43■□□□□ 0.38
CHFR-222ENST00000544093 IGHV7-4-1A0A0J9YVY3 117 aa17.42■□□□□ 0.38
CHFR-222ENST00000544093 CD5P06127 495 aa17.42■□□□□ 0.38
CHFR-222ENST00000544093 INPP1P49441 399 aa17.42■□□□□ 0.38
CHFR-222ENST00000544093 SMCO1Q147U7 214 aa17.42■□□□□ 0.38
CHFR-222ENST00000544093 C2orf83Q53S99 150 aa17.42■□□□□ 0.38
CHFR-222ENST00000544093 NMSQ5H8A3 153 aa17.42■□□□□ 0.38
CHFR-222ENST00000544093 TMED4Q7Z7H5 227 aa17.42■□□□□ 0.38
CHFR-222ENST00000544093 TMEM116Q8NCL8 245 aa17.42■□□□□ 0.38
CHFR-222ENST00000544093 SLC24A4Q8NFF2 622 aa17.42■□□□□ 0.38
CHFR-222ENST00000544093 OR4X1Q8NH49 305 aa17.42■□□□□ 0.38
CHFR-222ENST00000544093 RNASEH2CQ8TDP1 164 aaKnown RBP17.42■□□□□ 0.38
CHFR-222ENST00000544093 CITED4Q96RK1 184 aa17.42■□□□□ 0.38
CHFR-222ENST00000544093 SRRQ9GZT4 340 aa17.42■□□□□ 0.38
CHFR-222ENST00000544093 SELENOKQ9Y6D0 94 aa17.42■□□□□ 0.38
CHFR-222ENST00000544093 IGHV3OR16-8A0A075B7F1 116 aa17.41■□□□□ 0.38
CHFR-222ENST00000544093 TRAV30A0A087WSZ9 112 aa17.41■□□□□ 0.38
CHFR-222ENST00000544093 OR4C46A6NHA9 309 aa17.41■□□□□ 0.38
CHFR-222ENST00000544093 CLN5O75503 358 aa17.41■□□□□ 0.38
CHFR-222ENST00000544093 TMEM50AO95807 157 aa17.41■□□□□ 0.38
CHFR-222ENST00000544093 NBEAL2Q6ZNJ1 2754 aa17.4■□□□□ 0.38
CHFR-222ENST00000544093 NAP1L6A6NFF2 107 aa17.4■□□□□ 0.38
CHFR-222ENST00000544093 ZNF207O43670 478 aaKnown RBP17.4■□□□□ 0.38
CHFR-222ENST00000544093 SLC25A4P12235 298 aa17.4■□□□□ 0.38
CHFR-222ENST00000544093 RBMS2Q15434 407 aaKnown RBP17.4■□□□□ 0.38
CHFR-222ENST00000544093 TRIQKQ629K1 86 aa17.4■□□□□ 0.38
CHFR-222ENST00000544093 ETFRF1Q6IPR1 90 aa17.4■□□□□ 0.38
CHFR-222ENST00000544093 FAM110AQ9BQ89 295 aa17.4■□□□□ 0.38
CHFR-222ENST00000544093 RHPN1-AS1Q9BWJ2 59 aa17.4■□□□□ 0.38
CHFR-222ENST00000544093 WFDC10AQ9H1F0 79 aa17.4■□□□□ 0.38
CHFR-222ENST00000544093 HSPB7Q9UBY9 170 aa17.4■□□□□ 0.38
CHFR-222ENST00000544093 A0A1B0GU03 582 aa17.39■□□□□ 0.37
CHFR-222ENST00000544093 RBMY1BA6NDE4 496 aaKnown RBP17.39■□□□□ 0.37
CHFR-222ENST00000544093 RBMY1EA6NEQ0 496 aaKnown RBP17.39■□□□□ 0.37
CHFR-222ENST00000544093 CHEK1O14757 476 aa17.39■□□□□ 0.37
CHFR-222ENST00000544093 RBMY1DP0C7P1 496 aaKnown RBP17.39■□□□□ 0.37
CHFR-222ENST00000544093 ATP5IP56385 69 aaPredicted RBP17.39■□□□□ 0.37
CHFR-222ENST00000544093 TNFRSF9Q07011 255 aa17.39■□□□□ 0.37
CHFR-222ENST00000544093 TOMM20LQ6UXN7 152 aa17.39■□□□□ 0.37
CHFR-222ENST00000544093 LYZL2Q7Z4W2 148 aa17.39■□□□□ 0.37
CHFR-222ENST00000544093 MUC7Q8TAX7 377 aa17.39■□□□□ 0.37
CHFR-222ENST00000544093 ZNF414Q96IQ9 312 aa17.39■□□□□ 0.37
CHFR-222ENST00000544093 FNDC4Q9H6D8 234 aaPredicted RBP17.39■□□□□ 0.37
CHFR-222ENST00000544093 PRR13Q9NZ81 148 aa17.39■□□□□ 0.37
CHFR-222ENST00000544093 U3KQ87 197 aa17.39■□□□□ 0.37
CHFR-222ENST00000544093 VAMP1P23763 118 aa17.38■□□□□ 0.37
CHFR-222ENST00000544093 NPY1RP25929 384 aa17.38■□□□□ 0.37
CHFR-222ENST00000544093 UBE2MP61081 183 aaKnown RBP17.38■□□□□ 0.37
CHFR-222ENST00000544093 LRTM2Q8N967 370 aa17.38■□□□□ 0.37
CHFR-222ENST00000544093 PUS1Q9Y606 427 aaKnown RBP eCLIP17.38■□□□□ 0.37
CHFR-222ENST00000544093 CMC4P56277 68 aaPredicted RBP17.37■□□□□ 0.37
CHFR-222ENST00000544093 CENPSQ8N2Z9 138 aa17.37■□□□□ 0.37
CHFR-222ENST00000544093 RNF2Q99496 336 aa17.37■□□□□ 0.37
CHFR-222ENST00000544093 GGTLC1Q9BX51 225 aa17.37■□□□□ 0.37
CHFR-222ENST00000544093 TMEM231Q9H6L2 316 aa17.37■□□□□ 0.37
CHFR-222ENST00000544093 LOC102724200A0A096LPH7 203 aaPredicted RBP17.36■□□□□ 0.37
CHFR-222ENST00000544093 CENPXA8MT69 81 aa17.36■□□□□ 0.37
CHFR-222ENST00000544093 SLC25A6P12236 298 aa17.36■□□□□ 0.37
CHFR-222ENST00000544093 OR1S1Q8NH92 325 aa17.36■□□□□ 0.37
CHFR-222ENST00000544093 DTD1Q8TEA8 209 aa17.36■□□□□ 0.37
CHFR-222ENST00000544093 ZFAND3Q9H8U3 227 aa17.36■□□□□ 0.37
CHFR-222ENST00000544093 SFT2D2O95562 160 aa17.35■□□□□ 0.37
CHFR-222ENST00000544093 IFNA10P01566 189 aa17.35■□□□□ 0.37
CHFR-222ENST00000544093 PAFAH1B2P68402 229 aa17.35■□□□□ 0.37
CHFR-222ENST00000544093 TMED3Q9Y3Q3 217 aa17.35■□□□□ 0.37
CHFR-222ENST00000544093 A0A1W2PS18 150 aa17.34■□□□□ 0.37
CHFR-222ENST00000544093 NXPH3O95157 252 aa17.34■□□□□ 0.37
CHFR-222ENST00000544093 BAK1Q16611 211 aa17.34■□□□□ 0.37
CHFR-222ENST00000544093 PRSS54Q6PEW0 395 aa17.34■□□□□ 0.37
CHFR-222ENST00000544093 OR1S2Q8NGQ3 325 aa17.34■□□□□ 0.37
CHFR-222ENST00000544093 NARS2Q96I59 477 aaKnown RBP17.34■□□□□ 0.37
CHFR-222ENST00000544093 C7orf50Q9BRJ6 194 aaKnown RBP17.34■□□□□ 0.37
CHFR-222ENST00000544093 VSIRQ9H7M9 311 aa17.34■□□□□ 0.37
CHFR-222ENST00000544093 EDA2RQ9HAV5 297 aa17.34■□□□□ 0.37
CHFR-222ENST00000544093 FAM90A26D6RGX4 464 aa17.33■□□□□ 0.36
CHFR-222ENST00000544093 NPPCP23582 126 aa17.33■□□□□ 0.36
CHFR-222ENST00000544093 PPP1R1AQ13522 171 aa17.33■□□□□ 0.36
CHFR-222ENST00000544093 MLANAQ16655 118 aa17.33■□□□□ 0.36
CHFR-222ENST00000544093 METTL26Q96S19 204 aa17.33■□□□□ 0.36
CHFR-222ENST00000544093 RBKSQ9H477 322 aa17.33■□□□□ 0.36
CHFR-222ENST00000544093 MRPL36Q9P0J6 103 aaKnown RBP17.33■□□□□ 0.36
CHFR-222ENST00000544093 IGHV3-49A0A0A0MS15 119 aa17.32■□□□□ 0.36
CHFR-222ENST00000544093 MED6O75586 246 aa17.32■□□□□ 0.36
CHFR-222ENST00000544093 NDUFB6O95139 128 aa17.32■□□□□ 0.36
CHFR-222ENST00000544093 IGKV1-17P01599 117 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms