RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 APELAP0DMC3 54 aa13.66□□□□□ -0.22
PTPRO-209ENST00000543886 RND2P52198 227 aa13.66□□□□□ -0.22
PTPRO-209ENST00000543886 NDUFA6P56556 154 aa13.66□□□□□ -0.22
PTPRO-209ENST00000543886 MMDQ15546 238 aa13.66□□□□□ -0.22
PTPRO-209ENST00000543886 VMO1Q7Z5L0 202 aa13.66□□□□□ -0.22
PTPRO-209ENST00000543886 C22orf15Q8WYQ4 148 aa13.66□□□□□ -0.22
PTPRO-209ENST00000543886 TMEM167BQ9NRX6 74 aa13.66□□□□□ -0.22
PTPRO-209ENST00000543886 TGIF2-C20orf24A0A0A6YYL0 155 aa13.65□□□□□ -0.22
PTPRO-209ENST00000543886 A0A1W2PRD5 423 aa13.65□□□□□ -0.22
PTPRO-209ENST00000543886 A0A1W2PRF3 423 aa13.65□□□□□ -0.22
PTPRO-209ENST00000543886 A0A1W2PRM7 423 aa13.65□□□□□ -0.22
PTPRO-209ENST00000543886 TCRBV4S1A1TA0A5B7 111 aa13.65□□□□□ -0.22
PTPRO-209ENST00000543886 CXCL1P09341 107 aa13.65□□□□□ -0.22
PTPRO-209ENST00000543886 SSBP2P81877 361 aaPredicted RBP13.65□□□□□ -0.22
PTPRO-209ENST00000543886 LHFPL4Q7Z7J7 247 aa13.65□□□□□ -0.22
PTPRO-209ENST00000543886 THAP8Q8NA92 274 aa13.65□□□□□ -0.22
PTPRO-209ENST00000543886 RNF2Q99496 336 aa13.65□□□□□ -0.22
PTPRO-209ENST00000543886 MRPL32Q9BYC8 188 aaKnown RBP13.65□□□□□ -0.22
PTPRO-209ENST00000543886 DOK5Q9P104 306 aa13.65□□□□□ -0.22
PTPRO-209ENST00000543886 CORTO00230 105 aa13.65□□□□□ -0.22
PTPRO-209ENST00000543886 OR7C2O60412 319 aa13.65□□□□□ -0.22
PTPRO-209ENST00000543886 ZFP36P26651 326 aaKnown RBP13.65□□□□□ -0.22
PTPRO-209ENST00000543886 PVRIGQ6DKI7 326 aa13.65□□□□□ -0.22
PTPRO-209ENST00000543886 PQLC2Q6ZP29 291 aa13.65□□□□□ -0.22
PTPRO-209ENST00000543886 C16orf82Q7Z2V1 217 aa13.65□□□□□ -0.22
PTPRO-209ENST00000543886 OR1P1Q8NH06 330 aa13.65□□□□□ -0.22
PTPRO-209ENST00000543886 SRSF12Q8WXF0 261 aaKnown RBP13.65□□□□□ -0.22
PTPRO-209ENST00000543886 ELOA3CA0A087WX78 387 aaPredicted RBP13.64□□□□□ -0.23
PTPRO-209ENST00000543886 TEX22C9J3V5 150 aa13.64□□□□□ -0.23
PTPRO-209ENST00000543886 COX7A2P2O60397 106 aa13.64□□□□□ -0.23
PTPRO-209ENST00000543886 SELENOTP62341 195 aa13.64□□□□□ -0.23
PTPRO-209ENST00000543886 CFHR4Q92496 578 aa13.64□□□□□ -0.23
PTPRO-209ENST00000543886 UHRF2Q96PU4 802 aa13.64□□□□□ -0.23
PTPRO-209ENST00000543886 SSX3Q99909 188 aa13.64□□□□□ -0.23
PTPRO-209ENST00000543886 ARL2-SNX15V9GYD0 113 aa13.64□□□□□ -0.23
PTPRO-209ENST00000543886 ARHGAP32A7KAX9 2087 aa13.64□□□□□ -0.23
PTPRO-209ENST00000543886 SCO2A0A1W2PP80 73 aa13.63□□□□□ -0.23
PTPRO-209ENST00000543886 NBR2O15453 112 aa13.63□□□□□ -0.23
PTPRO-209ENST00000543886 TGOLN2O43493 480 aa13.63□□□□□ -0.23
PTPRO-209ENST00000543886 CNIH1O95406 144 aa13.63□□□□□ -0.23
PTPRO-209ENST00000543886 MOSP00540 346 aa13.63□□□□□ -0.23
PTPRO-209ENST00000543886 MFAP2P55001 183 aa13.63□□□□□ -0.23
PTPRO-209ENST00000543886 BPIFB3P59826 476 aa13.63□□□□□ -0.23
PTPRO-209ENST00000543886 LCN2P80188 198 aa13.63□□□□□ -0.23
PTPRO-209ENST00000543886 OR1L4Q8NGR5 311 aa13.63□□□□□ -0.23
PTPRO-209ENST00000543886 TMEM37Q8WXS4 190 aa13.63□□□□□ -0.23
PTPRO-209ENST00000543886 PFDN5Q99471 154 aa13.63□□□□□ -0.23
PTPRO-209ENST00000543886 DERL1Q9BUN8 251 aa13.63□□□□□ -0.23
PTPRO-209ENST00000543886 DNAJC4Q9NNZ3 241 aa13.63□□□□□ -0.23
PTPRO-209ENST00000543886 F11RQ9Y624 299 aaKnown RBP13.63□□□□□ -0.23
PTPRO-209ENST00000543886 NAV3Q8IVL0 2385 aa13.63□□□□□ -0.23
PTPRO-209ENST00000543886 IGSF10Q6WRI0 2623 aa13.63□□□□□ -0.23
PTPRO-209ENST00000543886 IGKV1D-37A0A075B6S9 117 aa13.63□□□□□ -0.23
PTPRO-209ENST00000543886 H7BYZ3 331 aa13.63□□□□□ -0.23
PTPRO-209ENST00000543886 FCN1O00602 326 aa13.63□□□□□ -0.23
PTPRO-209ENST00000543886 C8orf88P0DMB2 117 aa13.63□□□□□ -0.23
PTPRO-209ENST00000543886 ZNF90Q03938 601 aa13.63□□□□□ -0.23
PTPRO-209ENST00000543886 HES1Q14469 280 aa13.63□□□□□ -0.23
PTPRO-209ENST00000543886 PYY3Q5JQD4 70 aa13.63□□□□□ -0.23
PTPRO-209ENST00000543886 CCDC144NLQ6NUI1 221 aa13.63□□□□□ -0.23
PTPRO-209ENST00000543886 SLC25A33Q9BSK2 321 aa13.63□□□□□ -0.23
PTPRO-209ENST00000543886 MRPL36Q9P0J6 103 aaKnown RBP13.63□□□□□ -0.23
PTPRO-209ENST00000543886 CRYGCP07315 174 aa13.62□□□□□ -0.23
PTPRO-209ENST00000543886 HOXB4P17483 251 aaPredicted RBP13.62□□□□□ -0.23
PTPRO-209ENST00000543886 LGALS4P56470 323 aa13.62□□□□□ -0.23
PTPRO-209ENST00000543886 SSX2Q16385 188 aa13.62□□□□□ -0.23
PTPRO-209ENST00000543886 C19orf35Q6ZS72 473 aa13.62□□□□□ -0.23
PTPRO-209ENST00000543886 OR5T1Q8NG75 326 aa13.62□□□□□ -0.23
PTPRO-209ENST00000543886 OR4X1Q8NH49 305 aa13.62□□□□□ -0.23
PTPRO-209ENST00000543886 ANAPC16Q96DE5 110 aa13.62□□□□□ -0.23
PTPRO-209ENST00000543886 OR5B12Q96R08 314 aa13.62□□□□□ -0.23
PTPRO-209ENST00000543886 SRSF8Q9BRL6 282 aaKnown RBP13.62□□□□□ -0.23
PTPRO-209ENST00000543886 DCHS2Q6V1P9 2916 aa13.62□□□□□ -0.23
PTPRO-209ENST00000543886 PSMB11A5LHX3 300 aa13.62□□□□□ -0.23
PTPRO-209ENST00000543886 IFITM10A6NMD0 228 aa13.62□□□□□ -0.23
PTPRO-209ENST00000543886 PPP1R2P9O14990 202 aa13.62□□□□□ -0.23
PTPRO-209ENST00000543886 C10orf113Q5VZT2 155 aa13.62□□□□□ -0.23
PTPRO-209ENST00000543886 LINC01551Q86U37 167 aa13.62□□□□□ -0.23
PTPRO-209ENST00000543886 FAM210BQ96KR6 192 aa13.62□□□□□ -0.23
PTPRO-209ENST00000543886 BPESC1Q9GZL8 116 aa13.62□□□□□ -0.23
PTPRO-209ENST00000543886 TNFRSF19Q9NS68 423 aa13.62□□□□□ -0.23
PTPRO-209ENST00000543886 PLXNB1O43157 2135 aa13.61□□□□□ -0.23
PTPRO-209ENST00000543886 OOSP1A8MZH6 123 aa13.61□□□□□ -0.23
PTPRO-209ENST00000543886 HIST1H2BKO60814 126 aa13.61□□□□□ -0.23
PTPRO-209ENST00000543886 HIST1H2BJP06899 126 aa13.61□□□□□ -0.23
PTPRO-209ENST00000543886 HIST1H2BOP23527 126 aa13.61□□□□□ -0.23
PTPRO-209ENST00000543886 HIST1H2BBP33778 126 aa13.61□□□□□ -0.23
PTPRO-209ENST00000543886 HIST1H2BDP58876 126 aa13.61□□□□□ -0.23
PTPRO-209ENST00000543886 HIST1H2BCP62807 126 aa13.61□□□□□ -0.23
PTPRO-209ENST00000543886 HIST2H2BEQ16778 126 aa13.61□□□□□ -0.23
PTPRO-209ENST00000543886 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.61□□□□□ -0.23
PTPRO-209ENST00000543886 DNLZQ5SXM8 178 aa13.61□□□□□ -0.23
PTPRO-209ENST00000543886 MINOS1Q5TGZ0 78 aa13.61□□□□□ -0.23
PTPRO-209ENST00000543886 NPBQ8NG41 125 aa13.61□□□□□ -0.23
PTPRO-209ENST00000543886 HIST1H2BHQ93079 126 aa13.61□□□□□ -0.23
PTPRO-209ENST00000543886 ZNF503Q96F45 646 aa13.61□□□□□ -0.23
PTPRO-209ENST00000543886 EAF1Q96JC9 268 aaPredicted RBP13.61□□□□□ -0.23
PTPRO-209ENST00000543886 HIST1H2BNQ99877 126 aa13.61□□□□□ -0.23
PTPRO-209ENST00000543886 HIST1H2BMQ99879 126 aa13.61□□□□□ -0.23
PTPRO-209ENST00000543886 SIRPDQ9H106 197 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 372.8 ms