RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 SUPT4H1P63272 117 aaKnown RBP9.72□□□□□ -0.85
TNFRSF1A-215ENST00000543359 DHODHQ02127 395 aa9.72□□□□□ -0.85
TNFRSF1A-215ENST00000543359 TMEM187Q14656 261 aa9.72□□□□□ -0.85
TNFRSF1A-215ENST00000543359 MLANAQ16655 118 aa9.72□□□□□ -0.85
TNFRSF1A-215ENST00000543359 DUSP18Q8NEJ0 188 aa9.72□□□□□ -0.85
TNFRSF1A-215ENST00000543359 MCFD2Q8NI22 146 aa9.72□□□□□ -0.85
TNFRSF1A-215ENST00000543359 TMEM170AQ8WVE7 144 aa9.72□□□□□ -0.85
TNFRSF1A-215ENST00000543359 RBPMSQ93062 196 aaKnown RBP9.72□□□□□ -0.85
TNFRSF1A-215ENST00000543359 GALNT14Q96FL9 552 aa9.72□□□□□ -0.85
TNFRSF1A-215ENST00000543359 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.72□□□□□ -0.85
TNFRSF1A-215ENST00000543359 UBQLN2Q9UHD9 624 aa9.72□□□□□ -0.85
TNFRSF1A-215ENST00000543359 VPS13DQ5THJ4 4388 aa9.72□□□□□ -0.85
TNFRSF1A-215ENST00000543359 IGHV3-49A0A0A0MS15 119 aa9.71□□□□□ -0.86
TNFRSF1A-215ENST00000543359 A0A1B0GU03 582 aa9.71□□□□□ -0.86
TNFRSF1A-215ENST00000543359 GNG7O60262 68 aa9.71□□□□□ -0.86
TNFRSF1A-215ENST00000543359 YIF1AO95070 293 aa9.71□□□□□ -0.86
TNFRSF1A-215ENST00000543359 SUB1P53999 127 aaKnown RBP eCLIP9.71□□□□□ -0.86
TNFRSF1A-215ENST00000543359 KLF9Q13886 244 aaPredicted RBP9.71□□□□□ -0.86
TNFRSF1A-215ENST00000543359 TMEM268Q5VZI3 342 aa9.71□□□□□ -0.86
TNFRSF1A-215ENST00000543359 TRIM63Q969Q1 353 aa9.71□□□□□ -0.86
TNFRSF1A-215ENST00000543359 VSIRQ9H7M9 311 aa9.71□□□□□ -0.86
TNFRSF1A-215ENST00000543359 CACNG5Q9UF02 275 aa9.71□□□□□ -0.86
TNFRSF1A-215ENST00000543359 EPPK1P58107 5090 aaKnown RBP9.71□□□□□ -0.86
TNFRSF1A-215ENST00000543359 IGHV3OR16-13A0A075B7E8 117 aa9.7□□□□□ -0.86
TNFRSF1A-215ENST00000543359 IGHV3-74A0A0B4J1X5 117 aa9.7□□□□□ -0.86
TNFRSF1A-215ENST00000543359 OR4C46A6NHA9 309 aa9.7□□□□□ -0.86
TNFRSF1A-215ENST00000543359 IGKV1-17P01599 117 aa9.7□□□□□ -0.86
TNFRSF1A-215ENST00000543359 HOXA1P49639 335 aaPredicted RBP9.7□□□□□ -0.86
TNFRSF1A-215ENST00000543359 ZNF600Q6ZNG1 722 aa9.7□□□□□ -0.86
TNFRSF1A-215ENST00000543359 OR4X1Q8NH49 305 aa9.7□□□□□ -0.86
TNFRSF1A-215ENST00000543359 ST8SIA2Q92186 375 aa9.7□□□□□ -0.86
TNFRSF1A-215ENST00000543359 IL22RA2Q969J5 263 aa9.7□□□□□ -0.86
TNFRSF1A-215ENST00000543359 PDCD10Q9BUL8 212 aa9.7□□□□□ -0.86
TNFRSF1A-215ENST00000543359 RBM38Q9H0Z9 239 aaKnown RBP9.7□□□□□ -0.86
TNFRSF1A-215ENST00000543359 PRR13Q9NZ81 148 aa9.7□□□□□ -0.86
TNFRSF1A-215ENST00000543359 PUS1Q9Y606 427 aaKnown RBP eCLIP9.7□□□□□ -0.86
TNFRSF1A-215ENST00000543359 V9GYH0 126 aa9.7□□□□□ -0.86
TNFRSF1A-215ENST00000543359 KMT2AQ03164 3969 aa9.69□□□□□ -0.86
TNFRSF1A-215ENST00000543359 LCE6AA0A183 80 aa9.69□□□□□ -0.86
TNFRSF1A-215ENST00000543359 CORTO00230 105 aa9.69□□□□□ -0.86
TNFRSF1A-215ENST00000543359 CLN5O75503 358 aa9.69□□□□□ -0.86
TNFRSF1A-215ENST00000543359 ZNF124Q15973 351 aa9.69□□□□□ -0.86
TNFRSF1A-215ENST00000543359 C2orf83Q53S99 150 aa9.69□□□□□ -0.86
TNFRSF1A-215ENST00000543359 NMSQ5H8A3 153 aa9.69□□□□□ -0.86
TNFRSF1A-215ENST00000543359 SCP2D1Q9UJQ7 156 aa9.69□□□□□ -0.86
TNFRSF1A-215ENST00000543359 DNAH10Q8IVF4 4471 aa9.69□□□□□ -0.86
TNFRSF1A-215ENST00000543359 NOL3O60936 208 aaKnown RBP9.68□□□□□ -0.86
TNFRSF1A-215ENST00000543359 HTR2BP41595 481 aa9.68□□□□□ -0.86
TNFRSF1A-215ENST00000543359 ZNF79Q15937 498 aa9.68□□□□□ -0.86
TNFRSF1A-215ENST00000543359 PRSS54Q6PEW0 395 aa9.68□□□□□ -0.86
TNFRSF1A-215ENST00000543359 Q6ZWC4 215 aa9.68□□□□□ -0.86
TNFRSF1A-215ENST00000543359 LYZL2Q7Z4W2 148 aa9.68□□□□□ -0.86
TNFRSF1A-215ENST00000543359 CCDC190Q86UF4 302 aa9.68□□□□□ -0.86
TNFRSF1A-215ENST00000543359 WFDC3Q8IUB2 231 aa9.68□□□□□ -0.86
TNFRSF1A-215ENST00000543359 APRG1Q8IVJ8 170 aa9.68□□□□□ -0.86
TNFRSF1A-215ENST00000543359 RNASE11Q8TAA1 199 aaKnown RBP9.68□□□□□ -0.86
TNFRSF1A-215ENST00000543359 SCGB3A2Q96PL1 93 aa9.68□□□□□ -0.86
TNFRSF1A-215ENST00000543359 ENY2Q9NPA8 101 aa9.68□□□□□ -0.86
TNFRSF1A-215ENST00000543359 MCUBQ9NWR8 336 aa9.68□□□□□ -0.86
TNFRSF1A-215ENST00000543359 A0A0B4J2A0 478 aa9.67□□□□□ -0.86
TNFRSF1A-215ENST00000543359 KIR2DL5BA0A0G2JN68 375 aa9.67□□□□□ -0.86
TNFRSF1A-215ENST00000543359 KIR2DL5BA0A0G2JPC4 375 aa9.67□□□□□ -0.86
TNFRSF1A-215ENST00000543359 DFFBO76075 338 aa9.67□□□□□ -0.86
TNFRSF1A-215ENST00000543359 OPRK1P41145 380 aa9.67□□□□□ -0.86
TNFRSF1A-215ENST00000543359 TIGITQ495A1 244 aa9.67□□□□□ -0.86
TNFRSF1A-215ENST00000543359 TCF24Q7RTU0 167 aa9.67□□□□□ -0.86
TNFRSF1A-215ENST00000543359 KIR2DL5AQ8N109 375 aa9.67□□□□□ -0.86
TNFRSF1A-215ENST00000543359 KIR2DL5BQ8NHK3 375 aa9.67□□□□□ -0.86
TNFRSF1A-215ENST00000543359 GINS3Q9BRX5 216 aa9.67□□□□□ -0.86
TNFRSF1A-215ENST00000543359 HEYLQ9NQ87 328 aaPredicted RBP9.67□□□□□ -0.86
TNFRSF1A-215ENST00000543359 SHPKQ9UHJ6 478 aa9.67□□□□□ -0.86
TNFRSF1A-215ENST00000543359 TP53TG1Q9Y2A0 90 aa9.67□□□□□ -0.86
TNFRSF1A-215ENST00000543359 KCNIP3Q9Y2W7 256 aa9.67□□□□□ -0.86
TNFRSF1A-215ENST00000543359 U3KQE9 123 aa9.67□□□□□ -0.86
TNFRSF1A-215ENST00000543359 IGKV3-7A0A075B6H7 116 aa9.66□□□□□ -0.86
TNFRSF1A-215ENST00000543359 IGHV3-66A0A0C4DH42 116 aa9.66□□□□□ -0.86
TNFRSF1A-215ENST00000543359 UBE2CO00762 179 aa9.66□□□□□ -0.86
TNFRSF1A-215ENST00000543359 NXPH3O95157 252 aa9.66□□□□□ -0.86
TNFRSF1A-215ENST00000543359 IGLC1P0CG04 106 aa9.66□□□□□ -0.86
TNFRSF1A-215ENST00000543359 SULT1A3P0DMM9 295 aa9.66□□□□□ -0.86
TNFRSF1A-215ENST00000543359 SULT1A4P0DMN0 295 aa9.66□□□□□ -0.86
TNFRSF1A-215ENST00000543359 AKR1C4P17516 323 aa9.66□□□□□ -0.86
TNFRSF1A-215ENST00000543359 CRYBB3P26998 211 aa9.66□□□□□ -0.86
TNFRSF1A-215ENST00000543359 APOC4P55056 127 aa9.66□□□□□ -0.86
TNFRSF1A-215ENST00000543359 EWSR1Q01844 656 aaKnown RBP eCLIP9.66□□□□□ -0.86
TNFRSF1A-215ENST00000543359 GBGT1Q8N5D6 347 aa9.66□□□□□ -0.86
TNFRSF1A-215ENST00000543359 RNASEH2CQ8TDP1 164 aaKnown RBP9.66□□□□□ -0.86
TNFRSF1A-215ENST00000543359 RNF183Q96D59 192 aa9.66□□□□□ -0.86
TNFRSF1A-215ENST00000543359 MS4A6AQ9H2W1 248 aa9.66□□□□□ -0.86
TNFRSF1A-215ENST00000543359 MAP6D1Q9H9H5 199 aa9.66□□□□□ -0.86
TNFRSF1A-215ENST00000543359 HSPB7Q9UBY9 170 aa9.66□□□□□ -0.86
TNFRSF1A-215ENST00000543359 CEBPZOSA8MTT3 80 aa9.65□□□□□ -0.86
TNFRSF1A-215ENST00000543359 SPRY2O43597 315 aa9.65□□□□□ -0.86
TNFRSF1A-215ENST00000543359 PITX3O75364 302 aa9.65□□□□□ -0.86
TNFRSF1A-215ENST00000543359 CD5P06127 495 aa9.65□□□□□ -0.86
TNFRSF1A-215ENST00000543359 RPL35AP18077 110 aaKnown RBP9.65□□□□□ -0.86
TNFRSF1A-215ENST00000543359 TFPI2P48307 235 aa9.65□□□□□ -0.86
TNFRSF1A-215ENST00000543359 CCR6P51684 374 aa9.65□□□□□ -0.86
TNFRSF1A-215ENST00000543359 TNFRSF9Q07011 255 aa9.65□□□□□ -0.86
TNFRSF1A-215ENST00000543359 DEFB135Q30KP9 77 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms