RNA–Protein interactions for RNA: ENST00000542830.5

LTBR-210, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-210ENST00000542830 FAM110AQ9BQ89 295 aa13.02□□□□□ -0.33
LTBR-210ENST00000542830 RHPN1-AS1Q9BWJ2 59 aa13.02□□□□□ -0.33
LTBR-210ENST00000542830 CD5P06127 495 aa13.01□□□□□ -0.33
LTBR-210ENST00000542830 OPRK1P41145 380 aa13.01□□□□□ -0.33
LTBR-210ENST00000542830 HTR2BP41595 481 aa13.01□□□□□ -0.33
LTBR-210ENST00000542830 AP3S2P59780 193 aa13.01□□□□□ -0.33
LTBR-210ENST00000542830 BSXQ3C1V8 233 aa13.01□□□□□ -0.33
LTBR-210ENST00000542830 GPR146Q96CH1 333 aa13.01□□□□□ -0.33
LTBR-210ENST00000542830 CACNG5Q9UF02 275 aa13.01□□□□□ -0.33
LTBR-210ENST00000542830 PIGBOS1A0A0B4J2F0 54 aa13□□□□□ -0.33
LTBR-210ENST00000542830 RPS10-NUDT3A0A1W2PQS6 291 aa13□□□□□ -0.33
LTBR-210ENST00000542830 TMEM50AO95807 157 aa13□□□□□ -0.33
LTBR-210ENST00000542830 ANXA3P12429 323 aa13□□□□□ -0.33
LTBR-210ENST00000542830 S100A5P33763 92 aa13□□□□□ -0.33
LTBR-210ENST00000542830 CMC4P56277 68 aaPredicted RBP13□□□□□ -0.33
LTBR-210ENST00000542830 TOMM20LQ6UXN7 152 aa13□□□□□ -0.33
LTBR-210ENST00000542830 OR4X1Q8NH49 305 aa13□□□□□ -0.33
LTBR-210ENST00000542830 IL17DQ8TAD2 202 aa13□□□□□ -0.33
LTBR-210ENST00000542830 TMEM230Q96A57 120 aa13□□□□□ -0.33
LTBR-210ENST00000542830 RNF2Q99496 336 aa13□□□□□ -0.33
LTBR-210ENST00000542830 HEYLQ9NQ87 328 aaPredicted RBP13□□□□□ -0.33
LTBR-210ENST00000542830 UBQLN2Q9UHD9 624 aa13□□□□□ -0.33
LTBR-210ENST00000542830 CLN5O75503 358 aa12.99□□□□□ -0.33
LTBR-210ENST00000542830 SULT1A3P0DMM9 295 aa12.99□□□□□ -0.33
LTBR-210ENST00000542830 SULT1A4P0DMN0 295 aa12.99□□□□□ -0.33
LTBR-210ENST00000542830 APOC4P55056 127 aa12.99□□□□□ -0.33
LTBR-210ENST00000542830 TMEM187Q14656 261 aa12.99□□□□□ -0.33
LTBR-210ENST00000542830 ODF3L2Q3SX64 289 aa12.99□□□□□ -0.33
LTBR-210ENST00000542830 PYDC2Q56P42 97 aa12.99□□□□□ -0.33
LTBR-210ENST00000542830 ZFAND6Q6FIF0 208 aa12.99□□□□□ -0.33
LTBR-210ENST00000542830 TOMM5Q8N4H5 51 aa12.99□□□□□ -0.33
LTBR-210ENST00000542830 DEDD2Q8WXF8 326 aa12.99□□□□□ -0.33
LTBR-210ENST00000542830 FNDC4Q9H6D8 234 aaPredicted RBP12.99□□□□□ -0.33
LTBR-210ENST00000542830 PUS1Q9Y606 427 aaKnown RBP eCLIP12.99□□□□□ -0.33
LTBR-210ENST00000542830 TRAV30A0A087WSZ9 112 aa12.98□□□□□ -0.33
LTBR-210ENST00000542830 IGHV3-49A0A0A0MS15 119 aa12.98□□□□□ -0.33
LTBR-210ENST00000542830 A0A0B4J2A0 478 aa12.98□□□□□ -0.33
LTBR-210ENST00000542830 CEBPZOSA8MTT3 80 aa12.98□□□□□ -0.33
LTBR-210ENST00000542830 ZNF701M0R085 212 aaPredicted RBP12.98□□□□□ -0.33
LTBR-210ENST00000542830 AKR1C4P17516 323 aa12.98□□□□□ -0.33
LTBR-210ENST00000542830 PAFAH1B2P68402 229 aa12.98□□□□□ -0.33
LTBR-210ENST00000542830 SRPXP78539 464 aa12.98□□□□□ -0.33
LTBR-210ENST00000542830 KLF9Q13886 244 aaPredicted RBP12.98□□□□□ -0.33
LTBR-210ENST00000542830 C2orf83Q53S99 150 aa12.98□□□□□ -0.33
LTBR-210ENST00000542830 NOXA1Q86UR1 476 aa12.98□□□□□ -0.33
LTBR-210ENST00000542830 RNASEH2CQ8TDP1 164 aaKnown RBP12.98□□□□□ -0.33
LTBR-210ENST00000542830 TRIM63Q969Q1 353 aa12.98□□□□□ -0.33
LTBR-210ENST00000542830 TMEM231Q9H6L2 316 aa12.98□□□□□ -0.33
LTBR-210ENST00000542830 ZFAND3Q9H8U3 227 aa12.98□□□□□ -0.33
LTBR-210ENST00000542830 SHPKQ9UHJ6 478 aa12.98□□□□□ -0.33
LTBR-210ENST00000542830 UBE2CO00762 179 aa12.97□□□□□ -0.33
LTBR-210ENST00000542830 SLC25A4P12235 298 aa12.97□□□□□ -0.33
LTBR-210ENST00000542830 CCR6P51684 374 aa12.97□□□□□ -0.33
LTBR-210ENST00000542830 FAM90A2PQ658T7 463 aa12.97□□□□□ -0.33
LTBR-210ENST00000542830 LGI3Q8N145 548 aa12.97□□□□□ -0.33
LTBR-210ENST00000542830 SLC24A4Q8NFF2 622 aa12.97□□□□□ -0.33
LTBR-210ENST00000542830 VSIRQ9H7M9 311 aa12.97□□□□□ -0.33
LTBR-210ENST00000542830 V9GYH0 126 aa12.97□□□□□ -0.33
LTBR-210ENST00000542830 KIR2DL5BA0A0G2JN68 375 aa12.96□□□□□ -0.33
LTBR-210ENST00000542830 KIR2DL5BA0A0G2JPC4 375 aa12.96□□□□□ -0.33
LTBR-210ENST00000542830 SUPT4H1P63272 117 aaKnown RBP12.96□□□□□ -0.33
LTBR-210ENST00000542830 NMSQ5H8A3 153 aa12.96□□□□□ -0.33
LTBR-210ENST00000542830 ETFRF1Q6IPR1 90 aa12.96□□□□□ -0.33
LTBR-210ENST00000542830 Q6ZWC4 215 aa12.96□□□□□ -0.33
LTBR-210ENST00000542830 TCF24Q7RTU0 167 aa12.96□□□□□ -0.33
LTBR-210ENST00000542830 KIR2DL5AQ8N109 375 aa12.96□□□□□ -0.33
LTBR-210ENST00000542830 KIR2DL5BQ8NHK3 375 aa12.96□□□□□ -0.33
LTBR-210ENST00000542830 ST8SIA2Q92186 375 aa12.96□□□□□ -0.33
LTBR-210ENST00000542830 RBM38Q9H0Z9 239 aaKnown RBP12.96□□□□□ -0.33
LTBR-210ENST00000542830 TP53TG1Q9Y2A0 90 aa12.96□□□□□ -0.33
LTBR-210ENST00000542830 DYNC2H1Q8NCM8 4307 aaKnown RBP12.95□□□□□ -0.34
LTBR-210ENST00000542830 IGHV3OR16-13A0A075B7E8 117 aa12.95□□□□□ -0.34
LTBR-210ENST00000542830 IGHV3-74A0A0B4J1X5 117 aa12.95□□□□□ -0.34
LTBR-210ENST00000542830 A0A1B0GU03 582 aa12.95□□□□□ -0.34
LTBR-210ENST00000542830 A0A1W2PS18 150 aa12.95□□□□□ -0.34
LTBR-210ENST00000542830 NPPCP23582 126 aa12.95□□□□□ -0.34
LTBR-210ENST00000542830 SMCO1Q147U7 214 aa12.95□□□□□ -0.34
LTBR-210ENST00000542830 ZNF79Q15937 498 aa12.95□□□□□ -0.34
LTBR-210ENST00000542830 MLANAQ16655 118 aa12.95□□□□□ -0.34
LTBR-210ENST00000542830 NARS2Q96I59 477 aaKnown RBP12.95□□□□□ -0.34
LTBR-210ENST00000542830 METTL26Q96S19 204 aa12.95□□□□□ -0.34
LTBR-210ENST00000542830 SLC25A21Q9BQT8 299 aaPredicted RBP12.95□□□□□ -0.34
LTBR-210ENST00000542830 OVOL2Q9BRP0 275 aa12.95□□□□□ -0.34
LTBR-210ENST00000542830 PRR13Q9NZ81 148 aa12.95□□□□□ -0.34
LTBR-210ENST00000542830 MRPL36Q9P0J6 103 aaKnown RBP12.95□□□□□ -0.34
LTBR-210ENST00000542830 IGKV3-7A0A075B6H7 116 aa12.94□□□□□ -0.34
LTBR-210ENST00000542830 DUXBA0A1W2PPF3 345 aa12.94□□□□□ -0.34
LTBR-210ENST00000542830 NPY1RP25929 384 aa12.94□□□□□ -0.34
LTBR-210ENST00000542830 TFPI2P48307 235 aa12.94□□□□□ -0.34
LTBR-210ENST00000542830 TNFRSF9Q07011 255 aa12.94□□□□□ -0.34
LTBR-210ENST00000542830 TMEM128Q5BJH2 165 aa12.94□□□□□ -0.34
LTBR-210ENST00000542830 SPANXN2Q5MJ10 180 aa12.94□□□□□ -0.34
LTBR-210ENST00000542830 LYZL2Q7Z4W2 148 aa12.94□□□□□ -0.34
LTBR-210ENST00000542830 TMED4Q7Z7H5 227 aa12.94□□□□□ -0.34
LTBR-210ENST00000542830 CCDC190Q86UF4 302 aa12.94□□□□□ -0.34
LTBR-210ENST00000542830 STPG3Q8N7X2 389 aa12.94□□□□□ -0.34
LTBR-210ENST00000542830 OR1S2Q8NGQ3 325 aa12.94□□□□□ -0.34
LTBR-210ENST00000542830 HSPB7Q9UBY9 170 aa12.94□□□□□ -0.34
LTBR-210ENST00000542830 U3KQ87 197 aa12.94□□□□□ -0.34
LTBR-210ENST00000542830 RYR3Q15413 4870 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms