RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 AGFG2O95081 481 aa6.58□□□□□ -1.36
PDLIM5-221ENST00000542407 NDUFB4O95168 129 aa6.58□□□□□ -1.36
PDLIM5-221ENST00000542407 THBDP07204 575 aa6.58□□□□□ -1.36
PDLIM5-221ENST00000542407 CRYGBP07316 175 aa6.58□□□□□ -1.36
PDLIM5-221ENST00000542407 HIST1H1EP10412 219 aaKnown RBP6.58□□□□□ -1.36
PDLIM5-221ENST00000542407 SERF2P84101 59 aa6.58□□□□□ -1.36
PDLIM5-221ENST00000542407 MZT1Q08AG7 82 aa6.58□□□□□ -1.36
PDLIM5-221ENST00000542407 IGFBP7Q16270 282 aa6.58□□□□□ -1.36
PDLIM5-221ENST00000542407 TIGITQ495A1 244 aa6.58□□□□□ -1.36
PDLIM5-221ENST00000542407 NMSQ5H8A3 153 aa6.58□□□□□ -1.36
PDLIM5-221ENST00000542407 Q8NA96 180 aa6.58□□□□□ -1.36
PDLIM5-221ENST00000542407 KIR2DL5BQ8NHK3 375 aa6.58□□□□□ -1.36
PDLIM5-221ENST00000542407 TMEM204Q9BSN7 226 aa6.58□□□□□ -1.36
PDLIM5-221ENST00000542407 SIRPDQ9H106 197 aa6.58□□□□□ -1.36
PDLIM5-221ENST00000542407 NRN1Q9NPD7 142 aa6.58□□□□□ -1.36
PDLIM5-221ENST00000542407 IL36RNQ9UBH0 155 aa6.58□□□□□ -1.36
PDLIM5-221ENST00000542407 MGAQ8IWI9 3026 aa6.58□□□□□ -1.36
PDLIM5-221ENST00000542407 FAM90A10PA6NDY2 464 aa6.58□□□□□ -1.36
PDLIM5-221ENST00000542407 FAM90A18PA6NE21 464 aa6.58□□□□□ -1.36
PDLIM5-221ENST00000542407 FAM90A16PA6NEW6 464 aa6.58□□□□□ -1.36
PDLIM5-221ENST00000542407 FAM90A20PA6NIJ5 464 aa6.58□□□□□ -1.36
PDLIM5-221ENST00000542407 FAM90A8PA6NJQ4 464 aa6.58□□□□□ -1.36
PDLIM5-221ENST00000542407 FAM90A7PA6NKC0 464 aa6.58□□□□□ -1.36
PDLIM5-221ENST00000542407 FABP5P3A8MUU1 101 aa6.58□□□□□ -1.36
PDLIM5-221ENST00000542407 FAM90A22PA8MWA6 464 aa6.58□□□□□ -1.36
PDLIM5-221ENST00000542407 FAM90A12PA8MX19 464 aa6.58□□□□□ -1.36
PDLIM5-221ENST00000542407 FAM90A5PA8MXJ8 464 aa6.58□□□□□ -1.36
PDLIM5-221ENST00000542407 FAM90A23PA8MXZ1 464 aa6.58□□□□□ -1.36
PDLIM5-221ENST00000542407 KRASP01116 189 aa6.58□□□□□ -1.36
PDLIM5-221ENST00000542407 FRMD6-AS1P0C7T7 363 aa6.58□□□□□ -1.36
PDLIM5-221ENST00000542407 FAM90A15PP0C7V4 464 aa6.58□□□□□ -1.36
PDLIM5-221ENST00000542407 FAM90A13PP0C7W8 464 aa6.58□□□□□ -1.36
PDLIM5-221ENST00000542407 FAM90A14PP0C7W9 464 aa6.58□□□□□ -1.36
PDLIM5-221ENST00000542407 FAM90A24PP0C7X0 464 aa6.58□□□□□ -1.36
PDLIM5-221ENST00000542407 NPPCP23582 126 aa6.58□□□□□ -1.36
PDLIM5-221ENST00000542407 FGF12P61328 243 aa6.58□□□□□ -1.36
PDLIM5-221ENST00000542407 HBG1P69891 147 aa6.58□□□□□ -1.36
PDLIM5-221ENST00000542407 HBG2P69892 147 aa6.58□□□□□ -1.36
PDLIM5-221ENST00000542407 ZNF114Q8NC26 417 aa6.58□□□□□ -1.36
PDLIM5-221ENST00000542407 OR10G7Q8NGN6 311 aa6.58□□□□□ -1.36
PDLIM5-221ENST00000542407 PROCRQ9UNN8 238 aa6.58□□□□□ -1.36
PDLIM5-221ENST00000542407 TMEM189A5PLL7 270 aa6.57□□□□□ -1.36
PDLIM5-221ENST00000542407 DPRXA6NFQ7 191 aa6.57□□□□□ -1.36
PDLIM5-221ENST00000542407 K7ENP7 123 aa6.57□□□□□ -1.36
PDLIM5-221ENST00000542407 NAPSAO96009 420 aa6.57□□□□□ -1.36
PDLIM5-221ENST00000542407 CA6P23280 308 aa6.57□□□□□ -1.36
PDLIM5-221ENST00000542407 NPY1RP25929 384 aa6.57□□□□□ -1.36
PDLIM5-221ENST00000542407 TBR1Q16650 682 aa6.57□□□□□ -1.36
PDLIM5-221ENST00000542407 LRRC75BQ2VPJ9 315 aa6.57□□□□□ -1.36
PDLIM5-221ENST00000542407 LCN12Q6JVE5 192 aa6.57□□□□□ -1.36
PDLIM5-221ENST00000542407 FAM19A2Q8N3H0 131 aa6.57□□□□□ -1.36
PDLIM5-221ENST00000542407 TAF15Q92804 592 aaKnown RBP eCLIP6.57□□□□□ -1.36
PDLIM5-221ENST00000542407 WDR61Q9GZS3 305 aaKnown RBP6.57□□□□□ -1.36
PDLIM5-221ENST00000542407 CACNG5Q9UF02 275 aa6.57□□□□□ -1.36
PDLIM5-221ENST00000542407 FAM186AA6NE01 2351 aa6.57□□□□□ -1.36
PDLIM5-221ENST00000542407 IGKV1D-13A0A0B4J2D9 117 aa6.57□□□□□ -1.36
PDLIM5-221ENST00000542407 A0A0G2JLM5 398 aa6.57□□□□□ -1.36
PDLIM5-221ENST00000542407 GAGE12JA6NER3 117 aa6.57□□□□□ -1.36
PDLIM5-221ENST00000542407 IQCF6A8MYZ5 107 aa6.57□□□□□ -1.36
PDLIM5-221ENST00000542407 SNURFLB1AK76 121 aa6.57□□□□□ -1.36
PDLIM5-221ENST00000542407 GAGE7O76087 117 aa6.57□□□□□ -1.36
PDLIM5-221ENST00000542407 GPX1P07203 203 aa6.57□□□□□ -1.36
PDLIM5-221ENST00000542407 CECR9P0C854 216 aa6.57□□□□□ -1.36
PDLIM5-221ENST00000542407 GAGE12FP0CL80 117 aa6.57□□□□□ -1.36
PDLIM5-221ENST00000542407 GAGE12GP0CL81 117 aa6.57□□□□□ -1.36
PDLIM5-221ENST00000542407 GAGE12IP0CL82 117 aa6.57□□□□□ -1.36
PDLIM5-221ENST00000542407 IGKV1-13P0DP09 117 aa6.57□□□□□ -1.36
PDLIM5-221ENST00000542407 MPV17P39210 176 aa6.57□□□□□ -1.36
PDLIM5-221ENST00000542407 GAGE4Q13068 117 aa6.57□□□□□ -1.36
PDLIM5-221ENST00000542407 FAM162BQ5T6X4 162 aa6.57□□□□□ -1.36
PDLIM5-221ENST00000542407 SLC25A40Q8TBP6 338 aa6.57□□□□□ -1.36
PDLIM5-221ENST00000542407 FAM57AQ8TBR7 257 aa6.57□□□□□ -1.36
PDLIM5-221ENST00000542407 RAB40CQ96S21 281 aa6.57□□□□□ -1.36
PDLIM5-221ENST00000542407 IGHV1-18A0A0C4DH31 117 aa6.57□□□□□ -1.36
PDLIM5-221ENST00000542407 K7EN84 100 aa6.57□□□□□ -1.36
PDLIM5-221ENST00000542407 SYNGR2O43760 224 aa6.57□□□□□ -1.36
PDLIM5-221ENST00000542407 GFRA3O60609 400 aa6.57□□□□□ -1.36
PDLIM5-221ENST00000542407 ZNF253O75346 499 aa6.57□□□□□ -1.36
PDLIM5-221ENST00000542407 SCTP09683 121 aa6.57□□□□□ -1.36
PDLIM5-221ENST00000542407 KIR2DS4P43632 304 aa6.57□□□□□ -1.36
PDLIM5-221ENST00000542407 PSG7Q13046 419 aa6.57□□□□□ -1.36
PDLIM5-221ENST00000542407 HLA-DRB5Q30154 266 aa6.57□□□□□ -1.36
PDLIM5-221ENST00000542407 TMEM78Q5T7P6 136 aa6.57□□□□□ -1.36
PDLIM5-221ENST00000542407 Q6ZRM9 215 aa6.57□□□□□ -1.36
PDLIM5-221ENST00000542407 HAPLN4Q86UW8 402 aa6.57□□□□□ -1.36
PDLIM5-221ENST00000542407 Q8N976 141 aa6.57□□□□□ -1.36
PDLIM5-221ENST00000542407 ABHD14BQ96IU4 210 aa6.57□□□□□ -1.36
PDLIM5-221ENST00000542407 GNB4Q9HAV0 340 aa6.57□□□□□ -1.36
PDLIM5-221ENST00000542407 TP73-AS1Q9UF72 201 aa6.57□□□□□ -1.36
PDLIM5-221ENST00000542407 SLC25A15Q9Y619 301 aa6.57□□□□□ -1.36
PDLIM5-221ENST00000542407 ATP5G3P48201 142 aa6.56□□□□□ -1.36
PDLIM5-221ENST00000542407 RHOBP62745 196 aa6.56□□□□□ -1.36
PDLIM5-221ENST00000542407 SLC38A11Q08AI6 406 aa6.56□□□□□ -1.36
PDLIM5-221ENST00000542407 FOXI2Q6ZQN5 318 aa6.56□□□□□ -1.36
PDLIM5-221ENST00000542407 MKXQ8IYA7 352 aa6.56□□□□□ -1.36
PDLIM5-221ENST00000542407 OR4F17Q8NGA8 305 aa6.56□□□□□ -1.36
PDLIM5-221ENST00000542407 GRAMD2BQ96HH9 432 aa6.56□□□□□ -1.36
PDLIM5-221ENST00000542407 ZNF488Q96MN9 340 aa6.56□□□□□ -1.36
PDLIM5-221ENST00000542407 DMXL2Q8TDJ6 3036 aa6.56□□□□□ -1.36
PDLIM5-221ENST00000542407 CTXND1A0A1B0GTU2 59 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms