RNA–Protein interactions for RNA: ENST00000541713.5

PTPN1-202, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

TSL 2 BASIC

Gene PTPN1, Length 3,469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-202ENST00000541713 IL19Q9UHD0 177 aa11□□□□□ -0.65
PTPN1-202ENST00000541713 PRSS46E5RG02 174 aa11□□□□□ -0.65
PTPN1-202ENST00000541713 CORTO00230 105 aa11□□□□□ -0.65
PTPN1-202ENST00000541713 AREGP15514 252 aa11□□□□□ -0.65
PTPN1-202ENST00000541713 SRP14P37108 136 aaKnown RBP11□□□□□ -0.65
PTPN1-202ENST00000541713 ZNF137PP52743 207 aa11□□□□□ -0.65
PTPN1-202ENST00000541713 ZNF439Q8NDP4 499 aa11□□□□□ -0.65
PTPN1-202ENST00000541713 WNT10AQ9GZT5 417 aa11□□□□□ -0.65
PTPN1-202ENST00000541713 PRNDQ9UKY0 176 aa11□□□□□ -0.65
PTPN1-202ENST00000541713 A0A1W2PN81 502 aa10.99□□□□□ -0.65
PTPN1-202ENST00000541713 C17orf100A8MU93 164 aa10.99□□□□□ -0.65
PTPN1-202ENST00000541713 MKRN2OSH3BPM6 223 aa10.99□□□□□ -0.65
PTPN1-202ENST00000541713 M0QZ24 198 aa10.99□□□□□ -0.65
PTPN1-202ENST00000541713 RPEL1Q2QD12 228 aa10.99□□□□□ -0.65
PTPN1-202ENST00000541713 ZNF835Q9Y2P0 537 aa10.99□□□□□ -0.65
PTPN1-202ENST00000541713 HILPDAQ9Y5L2 63 aa10.99□□□□□ -0.65
PTPN1-202ENST00000541713 CSPG4Q6UVK1 2322 aa10.99□□□□□ -0.65
PTPN1-202ENST00000541713 A6NNC1 897 aa10.99□□□□□ -0.65
PTPN1-202ENST00000541713 ZNF253O75346 499 aa10.99□□□□□ -0.65
PTPN1-202ENST00000541713 TNFRSF1AP19438 455 aa10.99□□□□□ -0.65
PTPN1-202ENST00000541713 ZNF600Q6ZNG1 722 aa10.99□□□□□ -0.65
PTPN1-202ENST00000541713 ZNF503Q96F45 646 aa10.99□□□□□ -0.65
PTPN1-202ENST00000541713 LSM4Q9Y4Z0 139 aaKnown RBP10.99□□□□□ -0.65
PTPN1-202ENST00000541713 MPDU1O75352 247 aa10.99□□□□□ -0.65
PTPN1-202ENST00000541713 VENTXO95231 258 aa10.99□□□□□ -0.65
PTPN1-202ENST00000541713 SRIP30626 198 aa10.99□□□□□ -0.65
PTPN1-202ENST00000541713 AMTP48728 403 aa10.99□□□□□ -0.65
PTPN1-202ENST00000541713 KLF17Q5JT82 389 aaPredicted RBP10.99□□□□□ -0.65
PTPN1-202ENST00000541713 TCTEX1D1Q8N7M0 179 aa10.99□□□□□ -0.65
PTPN1-202ENST00000541713 PARD6GQ9BYG4 376 aaPredicted RBP10.99□□□□□ -0.65
PTPN1-202ENST00000541713 TECRQ9NZ01 308 aaKnown RBP10.99□□□□□ -0.65
PTPN1-202ENST00000541713 CTSZQ9UBR2 303 aa10.99□□□□□ -0.65
PTPN1-202ENST00000541713 RAI1Q7Z5J4 1906 aaPredicted RBP10.98□□□□□ -0.65
PTPN1-202ENST00000541713 TRAV8-1A0A0A6YYK1 113 aa10.98□□□□□ -0.65
PTPN1-202ENST00000541713 RNASE2P10153 161 aaKnown RBP10.98□□□□□ -0.65
PTPN1-202ENST00000541713 GBGT1Q8N5D6 347 aa10.98□□□□□ -0.65
PTPN1-202ENST00000541713 PYGO2Q9BRQ0 406 aa10.98□□□□□ -0.65
PTPN1-202ENST00000541713 SLC45A2Q9UMX9 530 aa10.98□□□□□ -0.65
PTPN1-202ENST00000541713 POLQO75417 2590 aa10.98□□□□□ -0.65
PTPN1-202ENST00000541713 MUC21A0A0G2JKD1 596 aa10.98□□□□□ -0.65
PTPN1-202ENST00000541713 MUC21A0A140T8X8 626 aa10.98□□□□□ -0.65
PTPN1-202ENST00000541713 FOXA3P55318 350 aaPredicted RBP10.98□□□□□ -0.65
PTPN1-202ENST00000541713 TCTAP57738 103 aa10.98□□□□□ -0.65
PTPN1-202ENST00000541713 RPL15P61313 204 aaKnown RBP10.98□□□□□ -0.65
PTPN1-202ENST00000541713 PMCHL1Q16048 86 aa10.98□□□□□ -0.65
PTPN1-202ENST00000541713 MUC21Q5SSG8 566 aa10.98□□□□□ -0.65
PTPN1-202ENST00000541713 IBA57Q5T440 356 aaKnown RBP10.98□□□□□ -0.65
PTPN1-202ENST00000541713 IGFL2Q6UWQ7 119 aa10.98□□□□□ -0.65
PTPN1-202ENST00000541713 Q6ZS92 163 aa10.98□□□□□ -0.65
PTPN1-202ENST00000541713 Q71RC1 249 aaPredicted RBP10.98□□□□□ -0.65
PTPN1-202ENST00000541713 RCHY1Q96PM5 261 aa10.98□□□□□ -0.65
PTPN1-202ENST00000541713 NOTCH3Q9UM47 2321 aa10.98□□□□□ -0.65
PTPN1-202ENST00000541713 RNF114Q9Y508 228 aa10.98□□□□□ -0.65
PTPN1-202ENST00000541713 CGB3P0DN86 165 aa10.97□□□□□ -0.65
PTPN1-202ENST00000541713 CGB7P0DN87 165 aa10.97□□□□□ -0.65
PTPN1-202ENST00000541713 MFAP2P55001 183 aa10.97□□□□□ -0.65
PTPN1-202ENST00000541713 SLC25A33Q9BSK2 321 aa10.97□□□□□ -0.65
PTPN1-202ENST00000541713 MCRIP2Q9BUT9 160 aaKnown RBP10.97□□□□□ -0.65
PTPN1-202ENST00000541713 NAGKQ9UJ70 344 aa10.97□□□□□ -0.65
PTPN1-202ENST00000541713 FOXA2Q9Y261 457 aaPredicted RBP10.97□□□□□ -0.65
PTPN1-202ENST00000541713 SSUH2Q9Y2M2 353 aa10.97□□□□□ -0.65
PTPN1-202ENST00000541713 DOPEY2Q9Y3R5 2298 aa10.97□□□□□ -0.65
PTPN1-202ENST00000541713 PRCDQ00LT1 54 aa10.97□□□□□ -0.65
PTPN1-202ENST00000541713 LRRC10Q5BKY1 277 aa10.97□□□□□ -0.65
PTPN1-202ENST00000541713 SLC25A48Q6ZT89 311 aaKnown RBP10.97□□□□□ -0.65
PTPN1-202ENST00000541713 REC114Q7Z4M0 266 aa10.97□□□□□ -0.65
PTPN1-202ENST00000541713 FBXL15Q9H469 300 aa10.97□□□□□ -0.65
PTPN1-202ENST00000541713 FAM208BQ5VWN6 2430 aa10.97□□□□□ -0.65
PTPN1-202ENST00000541713 IGLV3-9A0A075B6K5 115 aa10.97□□□□□ -0.65
PTPN1-202ENST00000541713 RBP4P02753 201 aa10.97□□□□□ -0.65
PTPN1-202ENST00000541713 SLC25A5P05141 298 aaKnown RBP10.97□□□□□ -0.65
PTPN1-202ENST00000541713 HES1Q14469 280 aa10.97□□□□□ -0.65
PTPN1-202ENST00000541713 LINC00305Q7Z4B0 112 aa10.97□□□□□ -0.65
PTPN1-202ENST00000541713 OR2D3Q8NGH3 330 aa10.97□□□□□ -0.65
PTPN1-202ENST00000541713 OR1L8Q8NGR8 309 aa10.97□□□□□ -0.65
PTPN1-202ENST00000541713 GNB4Q9HAV0 340 aa10.97□□□□□ -0.65
PTPN1-202ENST00000541713 TMEM106BQ9NUM4 274 aa10.97□□□□□ -0.65
PTPN1-202ENST00000541713 HIVEP3Q5T1R4 2406 aa10.97□□□□□ -0.65
PTPN1-202ENST00000541713 ISLRO14498 428 aa10.96□□□□□ -0.65
PTPN1-202ENST00000541713 TGOLN2O43493 480 aa10.96□□□□□ -0.65
PTPN1-202ENST00000541713 IGHV3-23P01764 117 aa10.96□□□□□ -0.65
PTPN1-202ENST00000541713 CRYABP02511 175 aaKnown RBP10.96□□□□□ -0.65
PTPN1-202ENST00000541713 THBDP07204 575 aa10.96□□□□□ -0.65
PTPN1-202ENST00000541713 LYZP61626 148 aa10.96□□□□□ -0.65
PTPN1-202ENST00000541713 C10orf113Q5VZT2 155 aa10.96□□□□□ -0.65
PTPN1-202ENST00000541713 LCN12Q6JVE5 192 aa10.96□□□□□ -0.65
PTPN1-202ENST00000541713 Q6ZWC4 215 aa10.96□□□□□ -0.65
PTPN1-202ENST00000541713 TMEM144Q7Z5S9 345 aa10.96□□□□□ -0.65
PTPN1-202ENST00000541713 FAM57AQ8TBR7 257 aa10.96□□□□□ -0.65
PTPN1-202ENST00000541713 GAL3ST2Q9H3Q3 398 aa10.96□□□□□ -0.65
PTPN1-202ENST00000541713 IL36BQ9NZH7 164 aa10.96□□□□□ -0.65
PTPN1-202ENST00000541713 ONECUT1Q9UBC0 465 aa10.96□□□□□ -0.65
PTPN1-202ENST00000541713 PTPRBP23467 1997 aa10.96□□□□□ -0.65
PTPN1-202ENST00000541713 H0YJW9 148 aa10.96□□□□□ -0.66
PTPN1-202ENST00000541713 CNIH1O95406 144 aa10.96□□□□□ -0.66
PTPN1-202ENST00000541713 TMEM68Q96MH6 324 aa10.96□□□□□ -0.66
PTPN1-202ENST00000541713 PAXXQ9BUH6 204 aa10.96□□□□□ -0.66
PTPN1-202ENST00000541713 DNAJC4Q9NNZ3 241 aa10.96□□□□□ -0.66
PTPN1-202ENST00000541713 POLR3KQ9Y2Y1 108 aaPredicted RBP10.96□□□□□ -0.66
PTPN1-202ENST00000541713 AMMECR1Q9Y4X0 333 aaPredicted RBP10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms