RNA–Protein interactions for RNA: ENST00000541110.5

TRERF1-205, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 7,646 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-205ENST00000541110 PTPRDP23468 1912 aa8.42□□□□□ -1.06
TRERF1-205ENST00000541110 SCO2A0A1W2PP80 73 aa8.42□□□□□ -1.06
TRERF1-205ENST00000541110 SLC25A38Q96DW6 304 aa8.42□□□□□ -1.06
TRERF1-205ENST00000541110 LGALS1P09382 135 aaKnown RBP8.42□□□□□ -1.06
TRERF1-205ENST00000541110 RFPL3SP0C7P2 107 aa8.42□□□□□ -1.06
TRERF1-205ENST00000541110 SMIM6P0DI80 62 aa8.42□□□□□ -1.06
TRERF1-205ENST00000541110 NAT1P18440 290 aa8.42□□□□□ -1.06
TRERF1-205ENST00000541110 ZNF114Q8NC26 417 aa8.42□□□□□ -1.06
TRERF1-205ENST00000541110 COL6A6A6NMZ7 2263 aa8.42□□□□□ -1.06
TRERF1-205ENST00000541110 SDK2Q58EX2 2172 aa8.42□□□□□ -1.06
TRERF1-205ENST00000541110 EPOPA6NHQ4 379 aa8.42□□□□□ -1.06
TRERF1-205ENST00000541110 NRXN3Q9Y4C0 1643 aa8.42□□□□□ -1.06
TRERF1-205ENST00000541110 CCL3L1P16619 93 aa8.41□□□□□ -1.06
TRERF1-205ENST00000541110 BRCA1P38398 1863 aaKnown RBP8.41□□□□□ -1.06
TRERF1-205ENST00000541110 TRAF4Q9BUZ4 470 aaPredicted RBP8.41□□□□□ -1.06
TRERF1-205ENST00000541110 CYSLTR1Q9Y271 337 aa8.41□□□□□ -1.06
TRERF1-205ENST00000541110 TRAV9-2A0A087WT02 112 aa8.41□□□□□ -1.06
TRERF1-205ENST00000541110 NKAPP1Q8N9T2 125 aa8.41□□□□□ -1.06
TRERF1-205ENST00000541110 SMIM8Q96KF7 97 aa8.41□□□□□ -1.06
TRERF1-205ENST00000541110 SIRT4Q9Y6E7 314 aaPredicted RBP8.41□□□□□ -1.06
TRERF1-205ENST00000541110 SLC17A3O00476 420 aa8.41□□□□□ -1.06
TRERF1-205ENST00000541110 GNG5P63218 68 aa8.41□□□□□ -1.06
TRERF1-205ENST00000541110 OSR1Q8TAX0 266 aaPredicted RBP8.41□□□□□ -1.06
TRERF1-205ENST00000541110 TMEM91Q6ZNR0 172 aa8.41□□□□□ -1.06
TRERF1-205ENST00000541110 J3QW42 95 aa8.41□□□□□ -1.06
TRERF1-205ENST00000541110 SIGLEC5O15389 551 aa8.41□□□□□ -1.06
TRERF1-205ENST00000541110 TFF3Q07654 80 aa8.41□□□□□ -1.06
TRERF1-205ENST00000541110 HIGD1CA8MV81 97 aa8.41□□□□□ -1.06
TRERF1-205ENST00000541110 CCL1P22362 96 aa8.41□□□□□ -1.06
TRERF1-205ENST00000541110 SMDT1Q9H4I9 107 aa8.41□□□□□ -1.06
TRERF1-205ENST00000541110 DKK4Q9UBT3 224 aa8.41□□□□□ -1.06
TRERF1-205ENST00000541110 NR2C2APQ86WQ0 139 aa8.4□□□□□ -1.06
TRERF1-205ENST00000541110 SSBP4Q9BWG4 385 aaPredicted RBP8.4□□□□□ -1.06
TRERF1-205ENST00000541110 ZNF474Q6S9Z5 364 aaPredicted RBP8.4□□□□□ -1.06
TRERF1-205ENST00000541110 LHFPL4Q7Z7J7 247 aa8.4□□□□□ -1.06
TRERF1-205ENST00000541110 MSRB3Q8IXL7 192 aa8.4□□□□□ -1.06
TRERF1-205ENST00000541110 IMMP1LQ96LU5 166 aa8.4□□□□□ -1.06
TRERF1-205ENST00000541110 GDF15Q99988 308 aa8.4□□□□□ -1.06
TRERF1-205ENST00000541110 UCP3P55916 312 aa8.4□□□□□ -1.06
TRERF1-205ENST00000541110 PIP4P2Q8N4L2 257 aa8.4□□□□□ -1.06
TRERF1-205ENST00000541110 SNHG12Q9BXW3 62 aa8.4□□□□□ -1.06
TRERF1-205ENST00000541110 WNK3Q9BYP7 1800 aa8.4□□□□□ -1.06
TRERF1-205ENST00000541110 COL22A1Q8NFW1 1626 aaPredicted RBP8.4□□□□□ -1.06
TRERF1-205ENST00000541110 FAM90A10PA6NDY2 464 aa8.4□□□□□ -1.06
TRERF1-205ENST00000541110 FAM90A18PA6NE21 464 aa8.4□□□□□ -1.06
TRERF1-205ENST00000541110 FAM90A16PA6NEW6 464 aa8.4□□□□□ -1.06
TRERF1-205ENST00000541110 FAM90A20PA6NIJ5 464 aa8.4□□□□□ -1.06
TRERF1-205ENST00000541110 FAM90A8PA6NJQ4 464 aa8.4□□□□□ -1.06
TRERF1-205ENST00000541110 FAM90A7PA6NKC0 464 aa8.4□□□□□ -1.06
TRERF1-205ENST00000541110 FAM90A22PA8MWA6 464 aa8.4□□□□□ -1.06
TRERF1-205ENST00000541110 FAM90A12PA8MX19 464 aa8.4□□□□□ -1.06
TRERF1-205ENST00000541110 FAM90A5PA8MXJ8 464 aa8.4□□□□□ -1.06
TRERF1-205ENST00000541110 FAM90A23PA8MXZ1 464 aa8.4□□□□□ -1.06
TRERF1-205ENST00000541110 FAM90A15PP0C7V4 464 aa8.4□□□□□ -1.06
TRERF1-205ENST00000541110 FAM90A13PP0C7W8 464 aa8.4□□□□□ -1.06
TRERF1-205ENST00000541110 FAM90A14PP0C7W9 464 aa8.4□□□□□ -1.06
TRERF1-205ENST00000541110 FAM90A24PP0C7X0 464 aa8.4□□□□□ -1.06
TRERF1-205ENST00000541110 GATA2P23769 480 aaPredicted RBP8.4□□□□□ -1.06
TRERF1-205ENST00000541110 RPL36AP83881 106 aaKnown RBP8.4□□□□□ -1.06
TRERF1-205ENST00000541110 UNQ6494/PRO21346Q6UXR6 183 aa8.4□□□□□ -1.06
TRERF1-205ENST00000541110 RPL36ALQ969Q0 106 aaKnown RBP8.4□□□□□ -1.06
TRERF1-205ENST00000541110 SLC50A1Q9BRV3 221 aa8.4□□□□□ -1.06
TRERF1-205ENST00000541110 NRN1Q9NPD7 142 aa8.4□□□□□ -1.06
TRERF1-205ENST00000541110 KLF12Q9Y4X4 402 aa8.4□□□□□ -1.06
TRERF1-205ENST00000541110 TRIOBPQ9H2D6 2365 aa8.4□□□□□ -1.06
TRERF1-205ENST00000541110 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.4□□□□□ -1.07
TRERF1-205ENST00000541110 DAD1P61803 113 aa8.4□□□□□ -1.07
TRERF1-205ENST00000541110 BRD3OSQ6XYD6 125 aa8.4□□□□□ -1.07
TRERF1-205ENST00000541110 C9orf106Q8NAJ2 232 aa8.4□□□□□ -1.07
TRERF1-205ENST00000541110 GATAD1Q8WUU5 269 aa8.4□□□□□ -1.07
TRERF1-205ENST00000541110 LINC00312Q9Y6C7 94 aa8.4□□□□□ -1.07
TRERF1-205ENST00000541110 TRAV41A0A0B4J266 112 aa8.4□□□□□ -1.07
TRERF1-205ENST00000541110 RNF166Q96A37 237 aaPredicted RBP8.4□□□□□ -1.07
TRERF1-205ENST00000541110 H3BMM0 161 aa8.39□□□□□ -1.07
TRERF1-205ENST00000541110 KLRD1Q13241 179 aa8.39□□□□□ -1.07
TRERF1-205ENST00000541110 UBE2WQ96B02 151 aa8.39□□□□□ -1.07
TRERF1-205ENST00000541110 STRCP1A6NGW2 1772 aa8.39□□□□□ -1.07
TRERF1-205ENST00000541110 A0A0G2JMM0 328 aa8.39□□□□□ -1.07
TRERF1-205ENST00000541110 A0A1W2PPB8 328 aa8.39□□□□□ -1.07
TRERF1-205ENST00000541110 A0A1W2PRS3 328 aa8.39□□□□□ -1.07
TRERF1-205ENST00000541110 PGPEP1LA6NFU8 196 aa8.39□□□□□ -1.07
TRERF1-205ENST00000541110 KIR3DP1A8MWS1 328 aa8.39□□□□□ -1.07
TRERF1-205ENST00000541110 FXYD1O00168 92 aa8.39□□□□□ -1.07
TRERF1-205ENST00000541110 CTAG1AP78358 180 aa8.39□□□□□ -1.07
TRERF1-205ENST00000541110 COX5BP10606 129 aa8.39□□□□□ -1.07
TRERF1-205ENST00000541110 ZNF345Q14585 488 aa8.39□□□□□ -1.07
TRERF1-205ENST00000541110 ATXN8Q156A1 80 aa8.39□□□□□ -1.07
TRERF1-205ENST00000541110 CACNG8Q8WXS5 425 aa8.39□□□□□ -1.07
TRERF1-205ENST00000541110 BRWD3Q6RI45 1802 aa8.39□□□□□ -1.07
TRERF1-205ENST00000541110 CEP290O15078 2479 aa8.39□□□□□ -1.07
TRERF1-205ENST00000541110 UBR3Q6ZT12 1888 aa8.39□□□□□ -1.07
TRERF1-205ENST00000541110 GAGE2EQ4V326 116 aa8.39□□□□□ -1.07
TRERF1-205ENST00000541110 GAGE2DQ9UEU5 116 aa8.39□□□□□ -1.07
TRERF1-205ENST00000541110 CLPSL1A2RUU4 121 aa8.39□□□□□ -1.07
TRERF1-205ENST00000541110 NGFRP08138 427 aa8.39□□□□□ -1.07
TRERF1-205ENST00000541110 CIARTQ8N365 385 aaPredicted RBP8.39□□□□□ -1.07
TRERF1-205ENST00000541110 MAPK1IP1LQ8NDC0 245 aa8.39□□□□□ -1.07
TRERF1-205ENST00000541110 NDPQ00604 133 aa8.39□□□□□ -1.07
TRERF1-205ENST00000541110 RIPPLY2Q5TAB7 128 aa8.39□□□□□ -1.07
TRERF1-205ENST00000541110 FAM19A2Q8N3H0 131 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms