RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, human

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM65-203	ENST00000540812	SURF2	Q15527	256 aa	Predicted RBP	11.93	□□□□□ -0.5
TRIM65-203	ENST00000540812	DEDD2	Q8WXF8	326 aa		11.93	□□□□□ -0.5
TRIM65-203	ENST00000540812	MRGPRF	Q96AM1	343 aa		11.93	□□□□□ -0.5
TRIM65-203	ENST00000540812	DNAH17	Q9UFH2	4485 aa		11.93	□□□□□ -0.5
TRIM65-203	ENST00000540812		A6NHS1	94 aa		11.92	□□□□□ -0.5
TRIM65-203	ENST00000540812	MPTX1	A8MV57	137 aa		11.92	□□□□□ -0.5
TRIM65-203	ENST00000540812	MT-CO2	P00403	227 aa		11.92	□□□□□ -0.5
TRIM65-203	ENST00000540812	FAU	P35544	74 aa	Known RBP	11.92	□□□□□ -0.5
TRIM65-203	ENST00000540812	NANOS2	P60321	138 aa	Known RBP	11.92	□□□□□ -0.5
TRIM65-203	ENST00000540812	KLF9	Q13886	244 aa	Predicted RBP	11.92	□□□□□ -0.5
TRIM65-203	ENST00000540812	FAM90A2P	Q658T7	463 aa		11.92	□□□□□ -0.5
TRIM65-203	ENST00000540812	GBGT1	Q8N5D6	347 aa		11.92	□□□□□ -0.5
TRIM65-203	ENST00000540812	OR51S1	Q8NGJ8	323 aa		11.92	□□□□□ -0.5
TRIM65-203	ENST00000540812	OR13C8	Q8NGS7	320 aa		11.92	□□□□□ -0.5
TRIM65-203	ENST00000540812	MARCH1	Q8TCQ1	289 aa		11.92	□□□□□ -0.5
TRIM65-203	ENST00000540812	SEC22A	Q96IW7	307 aa		11.92	□□□□□ -0.5
TRIM65-203	ENST00000540812	TSC22D3	Q99576	134 aa		11.92	□□□□□ -0.5
TRIM65-203	ENST00000540812	KRTAP17-1	Q9BYP8	105 aa		11.92	□□□□□ -0.5
TRIM65-203	ENST00000540812	SRR	Q9GZT4	340 aa		11.92	□□□□□ -0.5
TRIM65-203	ENST00000540812	SCP2D1	Q9UJQ7	156 aa		11.92	□□□□□ -0.5
TRIM65-203	ENST00000540812	TRAV14DV4	A0A0A6YYC5	116 aa		11.91	□□□□□ -0.5
TRIM65-203	ENST00000540812	PI3	P19957	117 aa		11.91	□□□□□ -0.5
TRIM65-203	ENST00000540812	PRCD	Q00LT1	54 aa		11.91	□□□□□ -0.5
TRIM65-203	ENST00000540812	TOMM5	Q8N4H5	51 aa		11.91	□□□□□ -0.5
TRIM65-203	ENST00000540812	CCDC71L	Q8N9Z2	235 aa		11.91	□□□□□ -0.5
TRIM65-203	ENST00000540812	ZNF114	Q8NC26	417 aa		11.91	□□□□□ -0.5
TRIM65-203	ENST00000540812	OR4A16	Q8NH70	328 aa		11.91	□□□□□ -0.5
TRIM65-203	ENST00000540812	RARRES2	Q99969	163 aa		11.91	□□□□□ -0.5
TRIM65-203	ENST00000540812	COPZ2	Q9P299	210 aa		11.91	□□□□□ -0.5
TRIM65-203	ENST00000540812	B3GALNT1	O75752	331 aa		11.9	□□□□□ -0.5
TRIM65-203	ENST00000540812	APOH	P02749	345 aa	Predicted RBP	11.9	□□□□□ -0.5
TRIM65-203	ENST00000540812	IZUMO4	Q1ZYL8	232 aa		11.9	□□□□□ -0.5
TRIM65-203	ENST00000540812	SPINK9	Q5DT21	86 aa		11.9	□□□□□ -0.5
TRIM65-203	ENST00000540812	LGALS9C	Q6DKI2	356 aa		11.9	□□□□□ -0.5
TRIM65-203	ENST00000540812	TOMM20L	Q6UXN7	152 aa		11.9	□□□□□ -0.5
TRIM65-203	ENST00000540812	TCF24	Q7RTU0	167 aa		11.9	□□□□□ -0.5
TRIM65-203	ENST00000540812	LILRB2	Q8N423	598 aa		11.9	□□□□□ -0.5
TRIM65-203	ENST00000540812	OR11H2	Q8NH07	326 aa		11.9	□□□□□ -0.5
TRIM65-203	ENST00000540812	GATAD1	Q8WUU5	269 aa		11.9	□□□□□ -0.5
TRIM65-203	ENST00000540812	ST8SIA2	Q92186	375 aa		11.9	□□□□□ -0.5
TRIM65-203	ENST00000540812	PINX1	Q96BK5	328 aa	Known RBP	11.9	□□□□□ -0.5
TRIM65-203	ENST00000540812	SCGB3A2	Q96PL1	93 aa		11.9	□□□□□ -0.5
TRIM65-203	ENST00000540812	TXN2	Q99757	166 aa		11.9	□□□□□ -0.5
TRIM65-203	ENST00000540812	MCUB	Q9NWR8	336 aa		11.9	□□□□□ -0.5
TRIM65-203	ENST00000540812	GPR132	Q9UNW8	380 aa		11.9	□□□□□ -0.5
TRIM65-203	ENST00000540812	C14orf166	Q9Y224	244 aa	Known RBP	11.9	□□□□□ -0.5
TRIM65-203	ENST00000540812	C3orf85	A0A1B0GTC6	90 aa		11.89	□□□□□ -0.51
TRIM65-203	ENST00000540812	CMC4	P56277	68 aa	Predicted RBP	11.89	□□□□□ -0.51
TRIM65-203	ENST00000540812	HSPE1	P61604	102 aa	Known RBP	11.89	□□□□□ -0.51
TRIM65-203	ENST00000540812	LINC00299	Q6ZSB3	139 aa		11.89	□□□□□ -0.51
TRIM65-203	ENST00000540812	H2BFWT	Q7Z2G1	175 aa		11.89	□□□□□ -0.51
TRIM65-203	ENST00000540812	RTBDN	Q9BSG5	229 aa	Predicted RBP	11.89	□□□□□ -0.51
TRIM65-203	ENST00000540812	FBXL17	Q9UF56	701 aa		11.89	□□□□□ -0.51
TRIM65-203	ENST00000540812	IGHV3-66	A0A0C4DH42	116 aa		11.88	□□□□□ -0.51
TRIM65-203	ENST00000540812	DEFB4A	O15263	64 aa		11.88	□□□□□ -0.51
TRIM65-203	ENST00000540812	GNG7	O60262	68 aa		11.88	□□□□□ -0.51
TRIM65-203	ENST00000540812	FAM24B	Q8N5W8	94 aa		11.88	□□□□□ -0.51
TRIM65-203	ENST00000540812	C11orf45	Q8TAV5	145 aa		11.88	□□□□□ -0.51
TRIM65-203	ENST00000540812	TP53RK	Q96S44	253 aa		11.88	□□□□□ -0.51
TRIM65-203	ENST00000540812	C11orf68	Q9H3H3	251 aa	Known RBP	11.88	□□□□□ -0.51
TRIM65-203	ENST00000540812	VSIR	Q9H7M9	311 aa		11.88	□□□□□ -0.51
TRIM65-203	ENST00000540812	BATF3	Q9NR55	127 aa		11.88	□□□□□ -0.51
TRIM65-203	ENST00000540812	DYNC1H1	Q14204	4646 aa	Known RBP	11.88	□□□□□ -0.51
TRIM65-203	ENST00000540812	ST8SIA3	O43173	380 aa		11.87	□□□□□ -0.51
TRIM65-203	ENST00000540812	CA1	P00915	261 aa	Predicted RBP	11.87	□□□□□ -0.51
TRIM65-203	ENST00000540812	ERH	P84090	104 aa	Known RBP	11.87	□□□□□ -0.51
TRIM65-203	ENST00000540812	BAK1	Q16611	211 aa		11.87	□□□□□ -0.51
TRIM65-203	ENST00000540812	CNPY1	Q3B7I2	92 aa		11.87	□□□□□ -0.51
TRIM65-203	ENST00000540812	LEMD1	Q68G75	181 aa		11.87	□□□□□ -0.51
TRIM65-203	ENST00000540812	MS4A6A	Q9H2W1	248 aa		11.87	□□□□□ -0.51
TRIM65-203	ENST00000540812	ZFAND3	Q9H8U3	227 aa		11.87	□□□□□ -0.51
TRIM65-203	ENST00000540812	DFFB	O76075	338 aa		11.86	□□□□□ -0.51
TRIM65-203	ENST00000540812	ATG12	O94817	140 aa		11.86	□□□□□ -0.51
TRIM65-203	ENST00000540812	UCP1	P25874	307 aa		11.86	□□□□□ -0.51
TRIM65-203	ENST00000540812	DEFB131A	P59861	70 aa		11.86	□□□□□ -0.51
TRIM65-203	ENST00000540812	PAFAH1B2	P68402	229 aa		11.86	□□□□□ -0.51
TRIM65-203	ENST00000540812	PRR20E	P86478	221 aa		11.86	□□□□□ -0.51
TRIM65-203	ENST00000540812	PRR20C	P86479	221 aa		11.86	□□□□□ -0.51
TRIM65-203	ENST00000540812	PRR20D	P86480	221 aa		11.86	□□□□□ -0.51
TRIM65-203	ENST00000540812	PRR20B	P86481	221 aa		11.86	□□□□□ -0.51
TRIM65-203	ENST00000540812	PRR20A	P86496	221 aa		11.86	□□□□□ -0.51
TRIM65-203	ENST00000540812	RBMS2	Q15434	407 aa	Known RBP	11.86	□□□□□ -0.51
TRIM65-203	ENST00000540812	TRIQK	Q629K1	86 aa		11.86	□□□□□ -0.51
TRIM65-203	ENST00000540812	SDHC	Q99643	169 aa	Predicted RBP	11.86	□□□□□ -0.51
TRIM65-203	ENST00000540812	GINS3	Q9BRX5	216 aa		11.86	□□□□□ -0.51
TRIM65-203	ENST00000540812	NAA60	Q9H7X0	242 aa		11.86	□□□□□ -0.51
TRIM65-203	ENST00000540812	PUS1	Q9Y606	427 aa	Known RBP eCLIP	11.86	□□□□□ -0.51
TRIM65-203	ENST00000540812	PKHD1	P08F94	4074 aa		11.86	□□□□□ -0.51
TRIM65-203	ENST00000540812	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	11.85	□□□□□ -0.51
TRIM65-203	ENST00000540812		A0A1B0GU03	582 aa		11.85	□□□□□ -0.51
TRIM65-203	ENST00000540812	CRYM-AS1	A6NIL9	109 aa		11.85	□□□□□ -0.51
TRIM65-203	ENST00000540812	DNASE2	O00115	360 aa	Predicted RBP	11.85	□□□□□ -0.51
TRIM65-203	ENST00000540812	IGKV1-5	P01602	117 aa		11.85	□□□□□ -0.51
TRIM65-203	ENST00000540812	INPP1	P49441	399 aa		11.85	□□□□□ -0.51
TRIM65-203	ENST00000540812	SP6	Q3SY56	376 aa		11.85	□□□□□ -0.51
TRIM65-203	ENST00000540812	DUSP18	Q8NEJ0	188 aa		11.85	□□□□□ -0.51
TRIM65-203	ENST00000540812	SLC25A21	Q9BQT8	299 aa	Predicted RBP	11.85	□□□□□ -0.51
TRIM65-203	ENST00000540812	MFF	Q9GZY8	342 aa		11.85	□□□□□ -0.51
TRIM65-203	ENST00000540812	TMEM222	Q9H0R3	208 aa		11.85	□□□□□ -0.51
TRIM65-203	ENST00000540812	MRPL36	Q9P0J6	103 aa	Known RBP	11.85	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms