RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 TRAV2A0A0B4J234 112 aa7.78□□□□□ -1.16
CDCA3-208ENST00000540683 IGHV3-35A0A0C4DH35 117 aa7.78□□□□□ -1.16
CDCA3-208ENST00000540683 IGHV7-4-1A0A0J9YVY3 117 aa7.78□□□□□ -1.16
CDCA3-208ENST00000540683 RBMY1BA6NDE4 496 aaKnown RBP7.78□□□□□ -1.16
CDCA3-208ENST00000540683 RBMY1EA6NEQ0 496 aaKnown RBP7.78□□□□□ -1.16
CDCA3-208ENST00000540683 FABP12A6NFH5 140 aa7.78□□□□□ -1.16
CDCA3-208ENST00000540683 ST8SIA3O43173 380 aa7.78□□□□□ -1.16
CDCA3-208ENST00000540683 GSTZ1O43708 216 aaPredicted RBP7.78□□□□□ -1.16
CDCA3-208ENST00000540683 DFFBO76075 338 aa7.78□□□□□ -1.16
CDCA3-208ENST00000540683 IGKV1-39P01597 117 aa7.78□□□□□ -1.16
CDCA3-208ENST00000540683 IGKV1D-39P04432 117 aa7.78□□□□□ -1.16
CDCA3-208ENST00000540683 RBMY1DP0C7P1 496 aaKnown RBP7.78□□□□□ -1.16
CDCA3-208ENST00000540683 SLC25A4P12235 298 aa7.78□□□□□ -1.16
CDCA3-208ENST00000540683 PI3P19957 117 aa7.78□□□□□ -1.16
CDCA3-208ENST00000540683 NUP62P37198 522 aaPredicted RBP7.78□□□□□ -1.16
CDCA3-208ENST00000540683 OPRK1P41145 380 aa7.78□□□□□ -1.16
CDCA3-208ENST00000540683 AARDQ4LEZ3 155 aa7.78□□□□□ -1.16
CDCA3-208ENST00000540683 RNASEH2CQ8TDP1 164 aaKnown RBP7.78□□□□□ -1.16
CDCA3-208ENST00000540683 HEYLQ9NQ87 328 aaPredicted RBP7.78□□□□□ -1.16
CDCA3-208ENST00000540683 A0A0B4J293 547 aa7.77□□□□□ -1.17
CDCA3-208ENST00000540683 CRYM-AS1A6NIL9 109 aa7.77□□□□□ -1.17
CDCA3-208ENST00000540683 DNASE2O00115 360 aaPredicted RBP7.77□□□□□ -1.17
CDCA3-208ENST00000540683 CTDSP2O14595 271 aa7.77□□□□□ -1.17
CDCA3-208ENST00000540683 FABP1P07148 127 aa7.77□□□□□ -1.17
CDCA3-208ENST00000540683 P0C879 139 aa7.77□□□□□ -1.17
CDCA3-208ENST00000540683 NPPCP23582 126 aa7.77□□□□□ -1.17
CDCA3-208ENST00000540683 ADMP35318 185 aa7.77□□□□□ -1.17
CDCA3-208ENST00000540683 AP2S1P53680 142 aaPredicted RBP7.77□□□□□ -1.17
CDCA3-208ENST00000540683 MFAP2P55001 183 aa7.77□□□□□ -1.17
CDCA3-208ENST00000540683 SPCS2Q15005 226 aa7.77□□□□□ -1.17
CDCA3-208ENST00000540683 DYNC2LI1Q8TCX1 351 aa7.77□□□□□ -1.17
CDCA3-208ENST00000540683 METTL26Q96S19 204 aa7.77□□□□□ -1.17
CDCA3-208ENST00000540683 CHRDL1Q9BU40 450 aa7.77□□□□□ -1.17
CDCA3-208ENST00000540683 RHPN1-AS1Q9BWJ2 59 aa7.77□□□□□ -1.17
CDCA3-208ENST00000540683 IGHV3-21A0A0B4J1V1 117 aa7.76□□□□□ -1.17
CDCA3-208ENST00000540683 DUXBA0A1W2PPF3 345 aa7.76□□□□□ -1.17
CDCA3-208ENST00000540683 ANKRD20A5PA0PJZ0 165 aa7.76□□□□□ -1.17
CDCA3-208ENST00000540683 DBX1A6NMT0 343 aa7.76□□□□□ -1.17
CDCA3-208ENST00000540683 CEBPZOSA8MTT3 80 aa7.76□□□□□ -1.17
CDCA3-208ENST00000540683 CHEK1O14757 476 aa7.76□□□□□ -1.17
CDCA3-208ENST00000540683 CLN5O75503 358 aa7.76□□□□□ -1.17
CDCA3-208ENST00000540683 IGKV1-5P01602 117 aa7.76□□□□□ -1.17
CDCA3-208ENST00000540683 OR5AC1P0C628 307 aa7.76□□□□□ -1.17
CDCA3-208ENST00000540683 SULT1A3P0DMM9 295 aa7.76□□□□□ -1.17
CDCA3-208ENST00000540683 SULT1A4P0DMN0 295 aa7.76□□□□□ -1.17
CDCA3-208ENST00000540683 S100A7P31151 101 aa7.76□□□□□ -1.17
CDCA3-208ENST00000540683 CCR6P51684 374 aa7.76□□□□□ -1.17
CDCA3-208ENST00000540683 TMEM41BQ5BJD5 291 aa7.76□□□□□ -1.17
CDCA3-208ENST00000540683 TMEM268Q5VZI3 342 aa7.76□□□□□ -1.17
CDCA3-208ENST00000540683 PVRIGQ6DKI7 326 aa7.76□□□□□ -1.17
CDCA3-208ENST00000540683 WFDC3Q8IUB2 231 aa7.76□□□□□ -1.17
CDCA3-208ENST00000540683 OR4C16Q8NGL9 310 aa7.76□□□□□ -1.17
CDCA3-208ENST00000540683 OR4X1Q8NH49 305 aa7.76□□□□□ -1.17
CDCA3-208ENST00000540683 MCFD2Q8NI22 146 aa7.76□□□□□ -1.17
CDCA3-208ENST00000540683 TMEM230Q96A57 120 aa7.76□□□□□ -1.17
CDCA3-208ENST00000540683 MIXL1Q9H2W2 232 aa7.76□□□□□ -1.17
CDCA3-208ENST00000540683 MCUBQ9NWR8 336 aa7.76□□□□□ -1.17
CDCA3-208ENST00000540683 GPR132Q9UNW8 380 aa7.76□□□□□ -1.17
CDCA3-208ENST00000540683 TMEM56-RWDD3S4R434 201 aa7.76□□□□□ -1.17
CDCA3-208ENST00000540683 U3KQ87 197 aa7.76□□□□□ -1.17
CDCA3-208ENST00000540683 HELTA6NFD8 242 aa7.75□□□□□ -1.17
CDCA3-208ENST00000540683 CCDC160A6NGH7 325 aa7.75□□□□□ -1.17
CDCA3-208ENST00000540683 F8W735 103 aaPredicted RBP7.75□□□□□ -1.17
CDCA3-208ENST00000540683 SPRY2O43597 315 aa7.75□□□□□ -1.17
CDCA3-208ENST00000540683 TMEM50AO95807 157 aa7.75□□□□□ -1.17
CDCA3-208ENST00000540683 RNASE2P10153 161 aaKnown RBP7.75□□□□□ -1.17
CDCA3-208ENST00000540683 ETV6P41212 452 aa7.75□□□□□ -1.17
CDCA3-208ENST00000540683 RPL11P62913 178 aaKnown RBP7.75□□□□□ -1.17
CDCA3-208ENST00000540683 RPP30P78346 268 aaKnown RBP7.75□□□□□ -1.17
CDCA3-208ENST00000540683 SP6Q3SY56 376 aa7.75□□□□□ -1.17
CDCA3-208ENST00000540683 C2orf83Q53S99 150 aa7.75□□□□□ -1.17
CDCA3-208ENST00000540683 LGI3Q8N145 548 aa7.75□□□□□ -1.17
CDCA3-208ENST00000540683 OR4D10Q8NGI6 311 aa7.75□□□□□ -1.17
CDCA3-208ENST00000540683 OR51S1Q8NGJ8 323 aa7.75□□□□□ -1.17
CDCA3-208ENST00000540683 OR1S2Q8NGQ3 325 aa7.75□□□□□ -1.17
CDCA3-208ENST00000540683 Q8WTZ3 238 aa7.75□□□□□ -1.17
CDCA3-208ENST00000540683 GLYATL2Q8WU03 294 aa7.75□□□□□ -1.17
CDCA3-208ENST00000540683 GATAD1Q8WUU5 269 aa7.75□□□□□ -1.17
CDCA3-208ENST00000540683 SLC25A21Q9BQT8 299 aaPredicted RBP7.75□□□□□ -1.17
CDCA3-208ENST00000540683 RTBDNQ9BSG5 229 aaPredicted RBP7.75□□□□□ -1.17
CDCA3-208ENST00000540683 PUS1Q9Y606 427 aaKnown RBP eCLIP7.75□□□□□ -1.17
CDCA3-208ENST00000540683 KMT2CQ8NEZ4 4911 aaKnown RBP7.75□□□□□ -1.17
CDCA3-208ENST00000540683 ELOA3CA0A087WX78 387 aaPredicted RBP7.74□□□□□ -1.17
CDCA3-208ENST00000540683 A0A0B4J2A0 478 aa7.74□□□□□ -1.17
CDCA3-208ENST00000540683 LCE6AA0A183 80 aa7.74□□□□□ -1.17
CDCA3-208ENST00000540683 NUPR2A6NF83 97 aa7.74□□□□□ -1.17
CDCA3-208ENST00000540683 MPTX1A8MV57 137 aa7.74□□□□□ -1.17
CDCA3-208ENST00000540683 H3BMQ9 156 aa7.74□□□□□ -1.17
CDCA3-208ENST00000540683 AKR1C4P17516 323 aa7.74□□□□□ -1.17
CDCA3-208ENST00000540683 INPP1P49441 399 aa7.74□□□□□ -1.17
CDCA3-208ENST00000540683 SMCO1Q147U7 214 aa7.74□□□□□ -1.17
CDCA3-208ENST00000540683 SPANXN2Q5MJ10 180 aa7.74□□□□□ -1.17
CDCA3-208ENST00000540683 ZFAND6Q6FIF0 208 aa7.74□□□□□ -1.17
CDCA3-208ENST00000540683 TOMM20LQ6UXN7 152 aa7.74□□□□□ -1.17
CDCA3-208ENST00000540683 TCF24Q7RTU0 167 aa7.74□□□□□ -1.17
CDCA3-208ENST00000540683 CENPSQ8N2Z9 138 aa7.74□□□□□ -1.17
CDCA3-208ENST00000540683 TOMM5Q8N4H5 51 aa7.74□□□□□ -1.17
CDCA3-208ENST00000540683 SLC24A4Q8NFF2 622 aa7.74□□□□□ -1.17
CDCA3-208ENST00000540683 RNF2Q99496 336 aa7.74□□□□□ -1.17
CDCA3-208ENST00000540683 VSIRQ9H7M9 311 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms