RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 FNDC4Q9H6D8 234 aaPredicted RBP9.67□□□□□ -0.86
SEMA4D-223ENST00000540475 DNAH10Q8IVF4 4471 aa9.66□□□□□ -0.86
SEMA4D-223ENST00000540475 DNAH6Q9C0G6 4158 aa9.66□□□□□ -0.86
SEMA4D-223ENST00000540475 A0A1B0GU03 582 aa9.66□□□□□ -0.86
SEMA4D-223ENST00000540475 GSTZ1O43708 216 aaPredicted RBP9.66□□□□□ -0.86
SEMA4D-223ENST00000540475 CLN5O75503 358 aa9.66□□□□□ -0.86
SEMA4D-223ENST00000540475 JTBO76095 146 aa9.66□□□□□ -0.86
SEMA4D-223ENST00000540475 APOHP02749 345 aaPredicted RBP9.66□□□□□ -0.86
SEMA4D-223ENST00000540475 TMBIM6P55061 237 aa9.66□□□□□ -0.86
SEMA4D-223ENST00000540475 SPCS3P61009 180 aa9.66□□□□□ -0.86
SEMA4D-223ENST00000540475 DHODHQ02127 395 aa9.66□□□□□ -0.86
SEMA4D-223ENST00000540475 TRIM16LQ309B1 348 aa9.66□□□□□ -0.86
SEMA4D-223ENST00000540475 SCGB2B2Q4G0G5 96 aa9.66□□□□□ -0.86
SEMA4D-223ENST00000540475 SPINK9Q5DT21 86 aa9.66□□□□□ -0.86
SEMA4D-223ENST00000540475 SELENOHQ8IZQ5 122 aaKnown RBP9.66□□□□□ -0.86
SEMA4D-223ENST00000540475 LILRB2Q8N423 598 aa9.66□□□□□ -0.86
SEMA4D-223ENST00000540475 OR4X1Q8NH49 305 aa9.66□□□□□ -0.86
SEMA4D-223ENST00000540475 RAB2BQ8WUD1 216 aa9.66□□□□□ -0.86
SEMA4D-223ENST00000540475 PDCD10Q9BUL8 212 aa9.66□□□□□ -0.86
SEMA4D-223ENST00000540475 NAA60Q9H7X0 242 aa9.66□□□□□ -0.86
SEMA4D-223ENST00000540475 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.66□□□□□ -0.86
SEMA4D-223ENST00000540475 CCDC59Q9P031 241 aaKnown RBP9.66□□□□□ -0.86
SEMA4D-223ENST00000540475 MRPL36Q9P0J6 103 aaKnown RBP9.66□□□□□ -0.86
SEMA4D-223ENST00000540475 TMEM56-RWDD3S4R434 201 aa9.66□□□□□ -0.86
SEMA4D-223ENST00000540475 A0A0J9YWU9 116 aa9.65□□□□□ -0.86
SEMA4D-223ENST00000540475 ANKRD20A5PA0PJZ0 165 aa9.65□□□□□ -0.86
SEMA4D-223ENST00000540475 CRYM-AS1A6NIL9 109 aa9.65□□□□□ -0.86
SEMA4D-223ENST00000540475 DISC1C4P0D8 188 aa9.65□□□□□ -0.86
SEMA4D-223ENST00000540475 RGS5O15539 181 aa9.65□□□□□ -0.86
SEMA4D-223ENST00000540475 OR5AC1P0C628 307 aa9.65□□□□□ -0.86
SEMA4D-223ENST00000540475 AKAIN1P0CW23 69 aa9.65□□□□□ -0.86
SEMA4D-223ENST00000540475 EWSR1Q01844 656 aaKnown RBP eCLIP9.65□□□□□ -0.86
SEMA4D-223ENST00000540475 DEFB135Q30KP9 77 aa9.65□□□□□ -0.86
SEMA4D-223ENST00000540475 LYG2Q86SG7 212 aa9.65□□□□□ -0.86
SEMA4D-223ENST00000540475 APRG1Q8IVJ8 170 aa9.65□□□□□ -0.86
SEMA4D-223ENST00000540475 OR4C16Q8NGL9 310 aa9.65□□□□□ -0.86
SEMA4D-223ENST00000540475 ST8SIA2Q92186 375 aa9.65□□□□□ -0.86
SEMA4D-223ENST00000540475 RBPMSQ93062 196 aaKnown RBP9.65□□□□□ -0.86
SEMA4D-223ENST00000540475 PUS1Q9Y606 427 aaKnown RBP eCLIP9.65□□□□□ -0.86
SEMA4D-223ENST00000540475 IGHV3-49A0A0A0MS15 119 aa9.64□□□□□ -0.87
SEMA4D-223ENST00000540475 DFFBO76075 338 aa9.64□□□□□ -0.87
SEMA4D-223ENST00000540475 CRYBB3P26998 211 aa9.64□□□□□ -0.87
SEMA4D-223ENST00000540475 HTR2BP41595 481 aa9.64□□□□□ -0.87
SEMA4D-223ENST00000540475 PAFAH1B2P68402 229 aa9.64□□□□□ -0.87
SEMA4D-223ENST00000540475 ZNF124Q15973 351 aa9.64□□□□□ -0.87
SEMA4D-223ENST00000540475 MLANAQ16655 118 aa9.64□□□□□ -0.87
SEMA4D-223ENST00000540475 C2orf83Q53S99 150 aa9.64□□□□□ -0.87
SEMA4D-223ENST00000540475 FAAP20Q6NZ36 180 aa9.64□□□□□ -0.87
SEMA4D-223ENST00000540475 TCF24Q7RTU0 167 aa9.64□□□□□ -0.87
SEMA4D-223ENST00000540475 CLVS1Q8IUQ0 354 aaPredicted RBP9.64□□□□□ -0.87
SEMA4D-223ENST00000540475 IL22RA2Q969J5 263 aa9.64□□□□□ -0.87
SEMA4D-223ENST00000540475 DIRAS2Q96HU8 199 aa9.64□□□□□ -0.87
SEMA4D-223ENST00000540475 PRRT1Q99946 306 aa9.64□□□□□ -0.87
SEMA4D-223ENST00000540475 SLIRPQ9GZT3 109 aaKnown RBP9.64□□□□□ -0.87
SEMA4D-223ENST00000540475 C6orf62Q9GZU0 229 aaPredicted RBP9.64□□□□□ -0.87
SEMA4D-223ENST00000540475 CSTL1Q9H114 145 aa9.64□□□□□ -0.87
SEMA4D-223ENST00000540475 MS4A6AQ9H2W1 248 aa9.64□□□□□ -0.87
SEMA4D-223ENST00000540475 CACFD1Q9UGQ2 172 aa9.64□□□□□ -0.87
SEMA4D-223ENST00000540475 C14orf166Q9Y224 244 aaKnown RBP9.64□□□□□ -0.87
SEMA4D-223ENST00000540475 U3KQE9 123 aa9.64□□□□□ -0.87
SEMA4D-223ENST00000540475 TRAV30A0A087WSZ9 112 aa9.63□□□□□ -0.87
SEMA4D-223ENST00000540475 IGKV1-17P01599 117 aa9.63□□□□□ -0.87
SEMA4D-223ENST00000540475 RPL35AP18077 110 aaKnown RBP9.63□□□□□ -0.87
SEMA4D-223ENST00000540475 HOXA1P49639 335 aaPredicted RBP9.63□□□□□ -0.87
SEMA4D-223ENST00000540475 NMSQ5H8A3 153 aa9.63□□□□□ -0.87
SEMA4D-223ENST00000540475 RNASEH2CQ8TDP1 164 aaKnown RBP9.63□□□□□ -0.87
SEMA4D-223ENST00000540475 GATAD1Q8WUU5 269 aa9.63□□□□□ -0.87
SEMA4D-223ENST00000540475 TMEM170AQ8WVE7 144 aa9.63□□□□□ -0.87
SEMA4D-223ENST00000540475 GPR146Q96CH1 333 aa9.63□□□□□ -0.87
SEMA4D-223ENST00000540475 ENY2Q9NPA8 101 aa9.63□□□□□ -0.87
SEMA4D-223ENST00000540475 AGRNO00468 2067 aa9.63□□□□□ -0.87
SEMA4D-223ENST00000540475 IGHV3OR16-13A0A075B7E8 117 aa9.62□□□□□ -0.87
SEMA4D-223ENST00000540475 IGHV3-74A0A0B4J1X5 117 aa9.62□□□□□ -0.87
SEMA4D-223ENST00000540475 A0A1W2PS18 150 aa9.62□□□□□ -0.87
SEMA4D-223ENST00000540475 MPTX1A8MV57 137 aa9.62□□□□□ -0.87
SEMA4D-223ENST00000540475 NPPCP23582 126 aa9.62□□□□□ -0.87
SEMA4D-223ENST00000540475 OPRK1P41145 380 aa9.62□□□□□ -0.87
SEMA4D-223ENST00000540475 IL18Q14116 193 aa9.62□□□□□ -0.87
SEMA4D-223ENST00000540475 TMEM187Q14656 261 aa9.62□□□□□ -0.87
SEMA4D-223ENST00000540475 OR51S1Q8NGJ8 323 aa9.62□□□□□ -0.87
SEMA4D-223ENST00000540475 TMEM230Q96A57 120 aa9.62□□□□□ -0.87
SEMA4D-223ENST00000540475 TMEM231Q9H6L2 316 aa9.62□□□□□ -0.87
SEMA4D-223ENST00000540475 RSL24D1Q9UHA3 163 aaKnown RBP9.62□□□□□ -0.87
SEMA4D-223ENST00000540475 RPS10-NUDT3A0A1W2PQS6 291 aa9.61□□□□□ -0.87
SEMA4D-223ENST00000540475 NUPR2A6NF83 97 aa9.61□□□□□ -0.87
SEMA4D-223ENST00000540475 IGLC1P0CG04 106 aa9.61□□□□□ -0.87
SEMA4D-223ENST00000540475 TFPI2P48307 235 aa9.61□□□□□ -0.87
SEMA4D-223ENST00000540475 TMEM268Q5VZI3 342 aa9.61□□□□□ -0.87
SEMA4D-223ENST00000540475 PRSS54Q6PEW0 395 aa9.61□□□□□ -0.87
SEMA4D-223ENST00000540475 CEMP1Q6PRD7 247 aaPredicted RBP9.61□□□□□ -0.87
SEMA4D-223ENST00000540475 GBGT1Q8N5D6 347 aa9.61□□□□□ -0.87
SEMA4D-223ENST00000540475 TMEM217Q8N7C4 229 aa9.61□□□□□ -0.87
SEMA4D-223ENST00000540475 RNASE11Q8TAA1 199 aaKnown RBP9.61□□□□□ -0.87
SEMA4D-223ENST00000540475 LINC00476Q8WZB0 136 aa9.61□□□□□ -0.87
SEMA4D-223ENST00000540475 GRAMD2BQ96HH9 432 aa9.61□□□□□ -0.87
SEMA4D-223ENST00000540475 SCGB3A2Q96PL1 93 aa9.61□□□□□ -0.87
SEMA4D-223ENST00000540475 CACNG5Q9UF02 275 aa9.61□□□□□ -0.87
SEMA4D-223ENST00000540475 IGKV3-7A0A075B6H7 116 aa9.6□□□□□ -0.87
SEMA4D-223ENST00000540475 H3BMQ9 156 aa9.6□□□□□ -0.87
SEMA4D-223ENST00000540475 K7EQG2 157 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms