RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 RBMY1A1P0DJD3 496 aaKnown RBP8.71□□□□□ -1.02
CBX3P4-202ENST00000540428 RBMY1CP0DJD4 496 aa8.71□□□□□ -1.02
CBX3P4-202ENST00000540428 AKR1C2P52895 323 aa8.71□□□□□ -1.02
CBX3P4-202ENST00000540428 RBMY1FQ15415 496 aaKnown RBP8.71□□□□□ -1.02
CBX3P4-202ENST00000540428 IZUMO4Q1ZYL8 232 aa8.71□□□□□ -1.02
CBX3P4-202ENST00000540428 SPINK9Q5DT21 86 aa8.71□□□□□ -1.02
CBX3P4-202ENST00000540428 CENPSQ8N2Z9 138 aa8.71□□□□□ -1.02
CBX3P4-202ENST00000540428 STXBP6Q8NFX7 210 aa8.71□□□□□ -1.02
CBX3P4-202ENST00000540428 NARS2Q96I59 477 aaKnown RBP8.71□□□□□ -1.02
CBX3P4-202ENST00000540428 VCX3AQ9NNX9 186 aa8.71□□□□□ -1.02
CBX3P4-202ENST00000540428 COMMD3Q9UBI1 195 aa8.71□□□□□ -1.02
CBX3P4-202ENST00000540428 TRAV30A0A087WSZ9 112 aa8.7□□□□□ -1.02
CBX3P4-202ENST00000540428 PGAM2P15259 253 aa8.7□□□□□ -1.02
CBX3P4-202ENST00000540428 HLA-DMBP28068 263 aa8.7□□□□□ -1.02
CBX3P4-202ENST00000540428 OPRK1P41145 380 aa8.7□□□□□ -1.02
CBX3P4-202ENST00000540428 P2RY1P47900 373 aa8.7□□□□□ -1.02
CBX3P4-202ENST00000540428 EIF2B2P49770 351 aaKnown RBP8.7□□□□□ -1.02
CBX3P4-202ENST00000540428 PIGPP57054 158 aa8.7□□□□□ -1.02
CBX3P4-202ENST00000540428 LSM3P62310 102 aaKnown RBP8.7□□□□□ -1.02
CBX3P4-202ENST00000540428 BSXQ3C1V8 233 aa8.7□□□□□ -1.02
CBX3P4-202ENST00000540428 LINC00336Q6ZUF6 198 aa8.7□□□□□ -1.02
CBX3P4-202ENST00000540428 LHFPL1Q86WI0 220 aa8.7□□□□□ -1.02
CBX3P4-202ENST00000540428 SNX29P2Q8IUI4 249 aa8.7□□□□□ -1.02
CBX3P4-202ENST00000540428 ARRDC1Q8N5I2 433 aa8.7□□□□□ -1.02
CBX3P4-202ENST00000540428 DCANP1Q8TF63 244 aa8.7□□□□□ -1.02
CBX3P4-202ENST00000540428 TMEM230Q96A57 120 aa8.7□□□□□ -1.02
CBX3P4-202ENST00000540428 TP53RKQ96S44 253 aa8.7□□□□□ -1.02
CBX3P4-202ENST00000540428 RNF126Q9BV68 326 aa8.7□□□□□ -1.02
CBX3P4-202ENST00000540428 FNDC4Q9H6D8 234 aaPredicted RBP8.7□□□□□ -1.02
CBX3P4-202ENST00000540428 ENY2Q9NPA8 101 aa8.7□□□□□ -1.02
CBX3P4-202ENST00000540428 X6R8D5 127 aa8.7□□□□□ -1.02
CBX3P4-202ENST00000540428 HECTD4Q9Y4D8 3996 aa8.7□□□□□ -1.02
CBX3P4-202ENST00000540428 VPS13DQ5THJ4 4388 aa8.7□□□□□ -1.02
CBX3P4-202ENST00000540428 IGHV4-4A0A075B6R2 117 aa8.69□□□□□ -1.02
CBX3P4-202ENST00000540428 C3orf85A0A1B0GTC6 90 aa8.69□□□□□ -1.02
CBX3P4-202ENST00000540428 HELTA6NFD8 242 aa8.69□□□□□ -1.02
CBX3P4-202ENST00000540428 M0QYG6 137 aa8.69□□□□□ -1.02
CBX3P4-202ENST00000540428 B3GALNT1O75752 331 aa8.69□□□□□ -1.02
CBX3P4-202ENST00000540428 ZNF688P0C7X2 276 aa8.69□□□□□ -1.02
CBX3P4-202ENST00000540428 C4BPBP20851 252 aa8.69□□□□□ -1.02
CBX3P4-202ENST00000540428 ETV6P41212 452 aa8.69□□□□□ -1.02
CBX3P4-202ENST00000540428 HOXA1P49639 335 aaPredicted RBP8.69□□□□□ -1.02
CBX3P4-202ENST00000540428 RNASE10Q5GAN6 216 aaKnown RBP8.69□□□□□ -1.02
CBX3P4-202ENST00000540428 Q6ZTC4 211 aa8.69□□□□□ -1.02
CBX3P4-202ENST00000540428 CSNK1G2-AS1Q8NCQ2 148 aa8.69□□□□□ -1.02
CBX3P4-202ENST00000540428 MRPL36Q9P0J6 103 aaKnown RBP8.69□□□□□ -1.02
CBX3P4-202ENST00000540428 TBC1D24Q9ULP9 559 aa8.69□□□□□ -1.02
CBX3P4-202ENST00000540428 U3KQE9 123 aa8.69□□□□□ -1.02
CBX3P4-202ENST00000540428 ELOA3CA0A087WX78 387 aaPredicted RBP8.68□□□□□ -1.02
CBX3P4-202ENST00000540428 A0A087WXM4 84 aa8.68□□□□□ -1.02
CBX3P4-202ENST00000540428 RPS10-NUDT3A0A1W2PQS6 291 aa8.68□□□□□ -1.02
CBX3P4-202ENST00000540428 KNCNA6PVL3 124 aa8.68□□□□□ -1.02
CBX3P4-202ENST00000540428 IGKV1-17P01599 117 aa8.68□□□□□ -1.02
CBX3P4-202ENST00000540428 PI3P19957 117 aa8.68□□□□□ -1.02
CBX3P4-202ENST00000540428 TBPP20226 339 aa8.68□□□□□ -1.02
CBX3P4-202ENST00000540428 UCP1P25874 307 aa8.68□□□□□ -1.02
CBX3P4-202ENST00000540428 PPP5CP53041 499 aa8.68□□□□□ -1.02
CBX3P4-202ENST00000540428 AP2S1P53680 142 aaPredicted RBP8.68□□□□□ -1.02
CBX3P4-202ENST00000540428 TRIM16LQ309B1 348 aa8.68□□□□□ -1.02
CBX3P4-202ENST00000540428 AARDQ4LEZ3 155 aa8.68□□□□□ -1.02
CBX3P4-202ENST00000540428 ACTL10Q5JWF8 245 aa8.68□□□□□ -1.02
CBX3P4-202ENST00000540428 FAM219AQ8IW50 185 aa8.68□□□□□ -1.02
CBX3P4-202ENST00000540428 CCDC71LQ8N9Z2 235 aa8.68□□□□□ -1.02
CBX3P4-202ENST00000540428 OR52E5Q8NH55 327 aa8.68□□□□□ -1.02
CBX3P4-202ENST00000540428 RRNAD1Q96FB5 475 aaKnown RBP8.68□□□□□ -1.02
CBX3P4-202ENST00000540428 COPZ2Q9P299 210 aa8.68□□□□□ -1.02
CBX3P4-202ENST00000540428 DNAH6Q9C0G6 4158 aa8.68□□□□□ -1.02
CBX3P4-202ENST00000540428 AMBPP02760 352 aa8.67□□□□□ -1.02
CBX3P4-202ENST00000540428 HNRNPCP07910 306 aaKnown RBP eCLIP8.67□□□□□ -1.02
CBX3P4-202ENST00000540428 ELK1P19419 428 aa8.67□□□□□ -1.02
CBX3P4-202ENST00000540428 HTR2BP41595 481 aa8.67□□□□□ -1.02
CBX3P4-202ENST00000540428 SPCS3P61009 180 aa8.67□□□□□ -1.02
CBX3P4-202ENST00000540428 NUTF2P61970 127 aaKnown RBP8.67□□□□□ -1.02
CBX3P4-202ENST00000540428 MLANAQ16655 118 aa8.67□□□□□ -1.02
CBX3P4-202ENST00000540428 C16orf54Q6UWD8 224 aa8.67□□□□□ -1.02
CBX3P4-202ENST00000540428 OR1S2Q8NGQ3 325 aa8.67□□□□□ -1.02
CBX3P4-202ENST00000540428 ZFAND1Q8TCF1 268 aa8.67□□□□□ -1.02
CBX3P4-202ENST00000540428 GLMPQ8WWB7 406 aa8.67□□□□□ -1.02
CBX3P4-202ENST00000540428 RAB40CQ96S21 281 aa8.67□□□□□ -1.02
CBX3P4-202ENST00000540428 C1QTNF4Q9BXJ3 329 aa8.67□□□□□ -1.02
CBX3P4-202ENST00000540428 SEPSECSQ9HD40 501 aaKnown RBP8.67□□□□□ -1.02
CBX3P4-202ENST00000540428 KLK11Q9UBX7 282 aa8.67□□□□□ -1.02
CBX3P4-202ENST00000540428 A0A0G2JRQ6 117 aa8.66□□□□□ -1.02
CBX3P4-202ENST00000540428 HPGDSO60760 199 aa8.66□□□□□ -1.02
CBX3P4-202ENST00000540428 CD3DP04234 171 aa8.66□□□□□ -1.02
CBX3P4-202ENST00000540428 IGLC1P0CG04 106 aa8.66□□□□□ -1.02
CBX3P4-202ENST00000540428 SLC25A4P12235 298 aa8.66□□□□□ -1.02
CBX3P4-202ENST00000540428 YPEL3P61236 119 aaPredicted RBP8.66□□□□□ -1.02
CBX3P4-202ENST00000540428 NCS1P62166 190 aa8.66□□□□□ -1.02
CBX3P4-202ENST00000540428 DHRS2Q13268 280 aa8.66□□□□□ -1.02
CBX3P4-202ENST00000540428 SP6Q3SY56 376 aa8.66□□□□□ -1.02
CBX3P4-202ENST00000540428 TIGITQ495A1 244 aa8.66□□□□□ -1.02
CBX3P4-202ENST00000540428 C2orf83Q53S99 150 aa8.66□□□□□ -1.02
CBX3P4-202ENST00000540428 PSMG4Q5JS54 123 aa8.66□□□□□ -1.02
CBX3P4-202ENST00000540428 TERB2Q8NHR7 220 aa8.66□□□□□ -1.02
CBX3P4-202ENST00000540428 RNASEH2CQ8TDP1 164 aaKnown RBP8.66□□□□□ -1.02
CBX3P4-202ENST00000540428 Q8WTZ3 238 aa8.66□□□□□ -1.02
CBX3P4-202ENST00000540428 MTFP1Q9UDX5 166 aa8.66□□□□□ -1.02
CBX3P4-202ENST00000540428 KIAA1109Q2LD37 5005 aa8.66□□□□□ -1.02
CBX3P4-202ENST00000540428 DEFB131BA0A096LNP1 70 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms