RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 ARL3P36405 182 aa5.34□□□□□ -1.55
LPCAT3-209ENST00000540060 SUB1P53999 127 aaKnown RBP eCLIP5.34□□□□□ -1.55
LPCAT3-209ENST00000540060 DCTN2Q13561 401 aaKnown RBP5.34□□□□□ -1.55
LPCAT3-209ENST00000540060 KLF5Q13887 457 aaPredicted RBP5.34□□□□□ -1.55
LPCAT3-209ENST00000540060 RPEL1Q2QD12 228 aa5.34□□□□□ -1.55
LPCAT3-209ENST00000540060 IAH1Q2TAA2 248 aaPredicted RBP5.34□□□□□ -1.55
LPCAT3-209ENST00000540060 ZBTB8BQ8NAP8 495 aaPredicted RBP5.34□□□□□ -1.55
LPCAT3-209ENST00000540060 PINX1Q96BK5 328 aaKnown RBP5.34□□□□□ -1.55
LPCAT3-209ENST00000540060 BSCL2Q96G97 398 aaPredicted RBP5.34□□□□□ -1.55
LPCAT3-209ENST00000540060 MCRIP2Q9BUT9 160 aaKnown RBP5.34□□□□□ -1.55
LPCAT3-209ENST00000540060 MAGT1Q9H0U3 335 aa5.34□□□□□ -1.55
LPCAT3-209ENST00000540060 HIPK2Q9H2X6 1198 aa5.34□□□□□ -1.55
LPCAT3-209ENST00000540060 FNDC4Q9H6D8 234 aaPredicted RBP5.34□□□□□ -1.55
LPCAT3-209ENST00000540060 GPN1Q9HCN4 374 aaPredicted RBP5.34□□□□□ -1.55
LPCAT3-209ENST00000540060 C21orf62Q9NYP8 219 aa5.34□□□□□ -1.55
LPCAT3-209ENST00000540060 PRKDCP78527 4128 aaKnown RBP5.33□□□□□ -1.56
LPCAT3-209ENST00000540060 C7orf66A4D0T2 115 aa5.33□□□□□ -1.56
LPCAT3-209ENST00000540060 OR2T8A6NH00 312 aa5.33□□□□□ -1.56
LPCAT3-209ENST00000540060 A8MWP6 167 aa5.33□□□□□ -1.56
LPCAT3-209ENST00000540060 TGOLN2O43493 480 aa5.33□□□□□ -1.56
LPCAT3-209ENST00000540060 MED6O75586 246 aa5.33□□□□□ -1.56
LPCAT3-209ENST00000540060 IFNA10P01566 189 aa5.33□□□□□ -1.56
LPCAT3-209ENST00000540060 IGHV3-48P01763 117 aa5.33□□□□□ -1.56
LPCAT3-209ENST00000540060 CLEC3BP05452 202 aa5.33□□□□□ -1.56
LPCAT3-209ENST00000540060 IAPPP10997 89 aa5.33□□□□□ -1.56
LPCAT3-209ENST00000540060 ADMP35318 185 aa5.33□□□□□ -1.56
LPCAT3-209ENST00000540060 OPRK1P41145 380 aa5.33□□□□□ -1.56
LPCAT3-209ENST00000540060 NKX2-1P43699 371 aaPredicted RBP5.33□□□□□ -1.56
LPCAT3-209ENST00000540060 SYNJ2BPP57105 145 aa5.33□□□□□ -1.56
LPCAT3-209ENST00000540060 ID3Q02535 119 aa5.33□□□□□ -1.56
LPCAT3-209ENST00000540060 BEAN1Q3B7T3 259 aa5.33□□□□□ -1.56
LPCAT3-209ENST00000540060 KPRPQ5T749 579 aaPredicted RBP5.33□□□□□ -1.56
LPCAT3-209ENST00000540060 ACSM6Q6P461 480 aa5.33□□□□□ -1.56
LPCAT3-209ENST00000540060 C1QL4Q86Z23 238 aa5.33□□□□□ -1.56
LPCAT3-209ENST00000540060 UBAC2Q8NBM4 344 aa5.33□□□□□ -1.56
LPCAT3-209ENST00000540060 UXS1Q8NBZ7 420 aa5.33□□□□□ -1.56
LPCAT3-209ENST00000540060 RNASEH2CQ8TDP1 164 aaKnown RBP5.33□□□□□ -1.56
LPCAT3-209ENST00000540060 ZNF414Q96IQ9 312 aa5.33□□□□□ -1.56
LPCAT3-209ENST00000540060 TXN2Q99757 166 aa5.33□□□□□ -1.56
LPCAT3-209ENST00000540060 CHRDL1Q9BU40 450 aa5.33□□□□□ -1.56
LPCAT3-209ENST00000540060 GPR61Q9BZJ8 451 aa5.33□□□□□ -1.56
LPCAT3-209ENST00000540060 ZC4H2Q9NQZ6 224 aa5.33□□□□□ -1.56
LPCAT3-209ENST00000540060 MRPL36Q9P0J6 103 aaKnown RBP5.33□□□□□ -1.56
LPCAT3-209ENST00000540060 RCL1Q9Y2P8 373 aaKnown RBP5.33□□□□□ -1.56
LPCAT3-209ENST00000540060 U3KQ87 197 aa5.33□□□□□ -1.56
LPCAT3-209ENST00000540060 C15orf62A8K5M9 175 aa5.32□□□□□ -1.56
LPCAT3-209ENST00000540060 FAM25EA8MYX2 175 aa5.32□□□□□ -1.56
LPCAT3-209ENST00000540060 SEC14L6B5MCN3 397 aa5.32□□□□□ -1.56
LPCAT3-209ENST00000540060 PRSS46E5RG02 174 aa5.32□□□□□ -1.56
LPCAT3-209ENST00000540060 H3BP45 60 aa5.32□□□□□ -1.56
LPCAT3-209ENST00000540060 LGALS9O00182 355 aa5.32□□□□□ -1.56
LPCAT3-209ENST00000540060 WRBO00258 174 aa5.32□□□□□ -1.56
LPCAT3-209ENST00000540060 GOSR2O14653 212 aa5.32□□□□□ -1.56
LPCAT3-209ENST00000540060 SSSCA1O60232 199 aa5.32□□□□□ -1.56
LPCAT3-209ENST00000540060 OR2C1O95371 312 aa5.32□□□□□ -1.56
LPCAT3-209ENST00000540060 LY86O95711 162 aa5.32□□□□□ -1.56
LPCAT3-209ENST00000540060 TMEM50AO95807 157 aa5.32□□□□□ -1.56
LPCAT3-209ENST00000540060 SCGB1D2O95969 90 aa5.32□□□□□ -1.56
LPCAT3-209ENST00000540060 MBPP02686 304 aaPredicted RBP5.32□□□□□ -1.56
LPCAT3-209ENST00000540060 CTSGP08311 255 aa5.32□□□□□ -1.56
LPCAT3-209ENST00000540060 MFAP4P55083 255 aa5.32□□□□□ -1.56
LPCAT3-209ENST00000540060 ATP5IP56385 69 aaPredicted RBP5.32□□□□□ -1.56
LPCAT3-209ENST00000540060 POLR2GP62487 172 aaKnown RBP eCLIP5.32□□□□□ -1.56
LPCAT3-209ENST00000540060 EGFEM1PQ0D2K5 195 aa5.32□□□□□ -1.56
LPCAT3-209ENST00000540060 TATDN3Q17R31 274 aa5.32□□□□□ -1.56
LPCAT3-209ENST00000540060 RGS21Q2M5E4 152 aa5.32□□□□□ -1.56
LPCAT3-209ENST00000540060 Q56UQ5 140 aa5.32□□□□□ -1.56
LPCAT3-209ENST00000540060 C9orf66Q5T8R8 295 aa5.32□□□□□ -1.56
LPCAT3-209ENST00000540060 SPSB3Q6PJ21 355 aa5.32□□□□□ -1.56
LPCAT3-209ENST00000540060 GSG1LQ6UXU4 331 aa5.32□□□□□ -1.56
LPCAT3-209ENST00000540060 IL34Q6ZMJ4 242 aa5.32□□□□□ -1.56
LPCAT3-209ENST00000540060 REC114Q7Z4M0 266 aa5.32□□□□□ -1.56
LPCAT3-209ENST00000540060 NOXA1Q86UR1 476 aa5.32□□□□□ -1.56
LPCAT3-209ENST00000540060 GPHB5Q86YW7 130 aa5.32□□□□□ -1.56
LPCAT3-209ENST00000540060 OR9G4Q8NGQ1 327 aa5.32□□□□□ -1.56
LPCAT3-209ENST00000540060 CIB3Q96Q77 187 aaPredicted RBP5.32□□□□□ -1.56
LPCAT3-209ENST00000540060 OR4C12Q96R67 309 aa5.32□□□□□ -1.56
LPCAT3-209ENST00000540060 ZNF436Q9C0F3 470 aaPredicted RBP5.32□□□□□ -1.56
LPCAT3-209ENST00000540060 GAR1Q9NY12 217 aaKnown RBP5.32□□□□□ -1.56
LPCAT3-209ENST00000540060 RPS10-NUDT3A0A1W2PQS6 291 aa5.31□□□□□ -1.56
LPCAT3-209ENST00000540060 C5orf51A6NDU8 294 aa5.31□□□□□ -1.56
LPCAT3-209ENST00000540060 K7EPK0 472 aa5.31□□□□□ -1.56
LPCAT3-209ENST00000540060 GNG7O60262 68 aa5.31□□□□□ -1.56
LPCAT3-209ENST00000540060 SAP30O75446 220 aa5.31□□□□□ -1.56
LPCAT3-209ENST00000540060 CLN5O75503 358 aa5.31□□□□□ -1.56
LPCAT3-209ENST00000540060 SLC25A4P12235 298 aa5.31□□□□□ -1.56
LPCAT3-209ENST00000540060 EDN2P20800 178 aa5.31□□□□□ -1.56
LPCAT3-209ENST00000540060 NPBWR1P48145 328 aa5.31□□□□□ -1.56
LPCAT3-209ENST00000540060 INSL3P51460 131 aa5.31□□□□□ -1.56
LPCAT3-209ENST00000540060 PAX9P55771 341 aa5.31□□□□□ -1.56
LPCAT3-209ENST00000540060 H2BFSP57053 126 aa5.31□□□□□ -1.56
LPCAT3-209ENST00000540060 CD69Q07108 199 aa5.31□□□□□ -1.56
LPCAT3-209ENST00000540060 IL15RAQ13261 267 aa5.31□□□□□ -1.56
LPCAT3-209ENST00000540060 OXA1LQ15070 435 aa5.31□□□□□ -1.56
LPCAT3-209ENST00000540060 MLANAQ16655 118 aa5.31□□□□□ -1.56
LPCAT3-209ENST00000540060 PRSS54Q6PEW0 395 aa5.31□□□□□ -1.56
LPCAT3-209ENST00000540060 UNQ9165/PRO28630Q6UXU0 137 aa5.31□□□□□ -1.56
LPCAT3-209ENST00000540060 SLC16A13Q7RTY0 426 aa5.31□□□□□ -1.56
LPCAT3-209ENST00000540060 TMEM116Q8NCL8 245 aa5.31□□□□□ -1.56
LPCAT3-209ENST00000540060 OR4X1Q8NH49 305 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms