RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 IFNA10P01566 189 aa8.37□□□□□ -1.07
CLSTN3-209ENST00000539982 IFNA21P01568 189 aa8.37□□□□□ -1.07
CLSTN3-209ENST00000539982 IFNA17P01571 189 aa8.37□□□□□ -1.07
CLSTN3-209ENST00000539982 FCGR2CP31995 323 aa8.37□□□□□ -1.07
CLSTN3-209ENST00000539982 INPP1P49441 399 aa8.37□□□□□ -1.07
CLSTN3-209ENST00000539982 RNASE12Q5GAN4 147 aaKnown RBP8.37□□□□□ -1.07
CLSTN3-209ENST00000539982 TRPT1Q86TN4 253 aaKnown RBP8.37□□□□□ -1.07
CLSTN3-209ENST00000539982 LILRB2Q8N423 598 aa8.37□□□□□ -1.07
CLSTN3-209ENST00000539982 FAM24BQ8N5W8 94 aa8.37□□□□□ -1.07
CLSTN3-209ENST00000539982 NUDCD2Q8WVJ2 157 aa8.37□□□□□ -1.07
CLSTN3-209ENST00000539982 FCAMRQ8WWV6 532 aa8.37□□□□□ -1.07
CLSTN3-209ENST00000539982 HINT2Q9BX68 163 aa8.37□□□□□ -1.07
CLSTN3-209ENST00000539982 VSIRQ9H7M9 311 aa8.37□□□□□ -1.07
CLSTN3-209ENST00000539982 AUNIPQ9H7T9 357 aa8.37□□□□□ -1.07
CLSTN3-209ENST00000539982 TBC1D24Q9ULP9 559 aa8.37□□□□□ -1.07
CLSTN3-209ENST00000539982 HSPG2P98160 4391 aa8.36□□□□□ -1.07
CLSTN3-209ENST00000539982 IGLV2-18A0A075B6J9 118 aa8.36□□□□□ -1.07
CLSTN3-209ENST00000539982 ST8SIA3O43173 380 aa8.36□□□□□ -1.07
CLSTN3-209ENST00000539982 SSX5O60225 188 aa8.36□□□□□ -1.07
CLSTN3-209ENST00000539982 APOHP02749 345 aaPredicted RBP8.36□□□□□ -1.07
CLSTN3-209ENST00000539982 PTHLHP12272 177 aa8.36□□□□□ -1.07
CLSTN3-209ENST00000539982 NPY1RP25929 384 aa8.36□□□□□ -1.07
CLSTN3-209ENST00000539982 PRSS3P35030 304 aa8.36□□□□□ -1.07
CLSTN3-209ENST00000539982 MFAP4P55083 255 aa8.36□□□□□ -1.07
CLSTN3-209ENST00000539982 DEFA1P59665 94 aa8.36□□□□□ -1.07
CLSTN3-209ENST00000539982 DEFA3P59666 94 aa8.36□□□□□ -1.07
CLSTN3-209ENST00000539982 RPL11P62913 178 aaKnown RBP8.36□□□□□ -1.07
CLSTN3-209ENST00000539982 ZNF767PQ75MW2 155 aa8.36□□□□□ -1.07
CLSTN3-209ENST00000539982 MAPKAPK5-AS1Q8N8E1 139 aa8.36□□□□□ -1.07
CLSTN3-209ENST00000539982 CSNK1G2-AS1Q8NCQ2 148 aa8.36□□□□□ -1.07
CLSTN3-209ENST00000539982 OR1P1Q8NH06 330 aa8.36□□□□□ -1.07
CLSTN3-209ENST00000539982 OR52I2Q8NH67 350 aa8.36□□□□□ -1.07
CLSTN3-209ENST00000539982 ST8SIA2Q92186 375 aa8.36□□□□□ -1.07
CLSTN3-209ENST00000539982 TRIM63Q969Q1 353 aa8.36□□□□□ -1.07
CLSTN3-209ENST00000539982 GINS3Q9BRX5 216 aa8.36□□□□□ -1.07
CLSTN3-209ENST00000539982 SCRT1Q9BWW7 348 aa8.36□□□□□ -1.07
CLSTN3-209ENST00000539982 SLC5A7Q9GZV3 580 aa8.36□□□□□ -1.07
CLSTN3-209ENST00000539982 SCPEP1Q9HB40 452 aa8.36□□□□□ -1.07
CLSTN3-209ENST00000539982 TMEM14BQ9NUH8 114 aa8.36□□□□□ -1.07
CLSTN3-209ENST00000539982 COMMD9Q9P000 198 aa8.36□□□□□ -1.07
CLSTN3-209ENST00000539982 CELA1Q9UNI1 258 aa8.36□□□□□ -1.07
CLSTN3-209ENST00000539982 TMEM235A6NFC5 223 aa8.35□□□□□ -1.07
CLSTN3-209ENST00000539982 I3L2K1 104 aa8.35□□□□□ -1.07
CLSTN3-209ENST00000539982 PPYP01298 95 aa8.35□□□□□ -1.07
CLSTN3-209ENST00000539982 CD74P04233 296 aa8.35□□□□□ -1.07
CLSTN3-209ENST00000539982 C4BPBP20851 252 aa8.35□□□□□ -1.07
CLSTN3-209ENST00000539982 GNG2P59768 71 aa8.35□□□□□ -1.07
CLSTN3-209ENST00000539982 ARPC4P59998 168 aa8.35□□□□□ -1.07
CLSTN3-209ENST00000539982 ERVK-16P61578 105 aa8.35□□□□□ -1.07
CLSTN3-209ENST00000539982 RGS21Q2M5E4 152 aa8.35□□□□□ -1.07
CLSTN3-209ENST00000539982 TOMM20LQ6UXN7 152 aa8.35□□□□□ -1.07
CLSTN3-209ENST00000539982 Q6ZRM9 215 aa8.35□□□□□ -1.07
CLSTN3-209ENST00000539982 CADM3Q8N126 398 aa8.35□□□□□ -1.07
CLSTN3-209ENST00000539982 OR51H1Q8NH63 302 aa8.35□□□□□ -1.07
CLSTN3-209ENST00000539982 GPX8Q8TED1 209 aa8.35□□□□□ -1.07
CLSTN3-209ENST00000539982 TMEM56Q96MV1 263 aa8.35□□□□□ -1.07
CLSTN3-209ENST00000539982 CLEC5AQ9NY25 188 aa8.35□□□□□ -1.07
CLSTN3-209ENST00000539982 OR51B2Q9Y5P1 312 aa8.35□□□□□ -1.07
CLSTN3-209ENST00000539982 AGRNO00468 2067 aa8.34□□□□□ -1.07
CLSTN3-209ENST00000539982 MARCH11A6NNE9 402 aa8.34□□□□□ -1.07
CLSTN3-209ENST00000539982 GNG7O60262 68 aa8.34□□□□□ -1.07
CLSTN3-209ENST00000539982 SNAPC5O75971 98 aa8.34□□□□□ -1.07
CLSTN3-209ENST00000539982 SSBP1Q04837 148 aaKnown RBP8.34□□□□□ -1.07
CLSTN3-209ENST00000539982 ASAH1Q13510 395 aa8.34□□□□□ -1.07
CLSTN3-209ENST00000539982 C1orf134Q5TEV5 83 aa8.34□□□□□ -1.07
CLSTN3-209ENST00000539982 ZNF818PQ6ZRF7 136 aa8.34□□□□□ -1.07
CLSTN3-209ENST00000539982 UBE2DNLQ8IWF7 75 aa8.34□□□□□ -1.07
CLSTN3-209ENST00000539982 BEST4Q8NFU0 473 aa8.34□□□□□ -1.07
CLSTN3-209ENST00000539982 KLK11Q9UBX7 282 aa8.34□□□□□ -1.07
CLSTN3-209ENST00000539982 MTFP1Q9UDX5 166 aa8.34□□□□□ -1.07
CLSTN3-209ENST00000539982 RABAC1Q9UI14 185 aa8.34□□□□□ -1.07
CLSTN3-209ENST00000539982 NSG2Q9Y328 171 aa8.34□□□□□ -1.07
CLSTN3-209ENST00000539982 IGHV3-66A0A0C4DH42 116 aa8.33□□□□□ -1.08
CLSTN3-209ENST00000539982 LINC00854A0A1B0GVQ3 168 aa8.33□□□□□ -1.08
CLSTN3-209ENST00000539982 KNCNA6PVL3 124 aa8.33□□□□□ -1.08
CLSTN3-209ENST00000539982 C16orf90A8MZG2 172 aa8.33□□□□□ -1.08
CLSTN3-209ENST00000539982 K7EQG2 157 aa8.33□□□□□ -1.08
CLSTN3-209ENST00000539982 PLA2G10O15496 165 aa8.33□□□□□ -1.08
CLSTN3-209ENST00000539982 MT-CO2P00403 227 aa8.33□□□□□ -1.08
CLSTN3-209ENST00000539982 RCVRNP35243 200 aa8.33□□□□□ -1.08
CLSTN3-209ENST00000539982 AP3S2P59780 193 aa8.33□□□□□ -1.08
CLSTN3-209ENST00000539982 KLF9Q13886 244 aaPredicted RBP8.33□□□□□ -1.08
CLSTN3-209ENST00000539982 RNF212Q495C1 297 aa8.33□□□□□ -1.08
CLSTN3-209ENST00000539982 AADACL3Q5VUY0 350 aa8.33□□□□□ -1.08
CLSTN3-209ENST00000539982 MZT2BQ6NZ67 158 aa8.33□□□□□ -1.08
CLSTN3-209ENST00000539982 TOMM5Q8N4H5 51 aa8.33□□□□□ -1.08
CLSTN3-209ENST00000539982 MISP3Q96FF7 219 aa8.33□□□□□ -1.08
CLSTN3-209ENST00000539982 GRAMD2BQ96HH9 432 aa8.33□□□□□ -1.08
CLSTN3-209ENST00000539982 FAM210BQ96KR6 192 aa8.33□□□□□ -1.08
CLSTN3-209ENST00000539982 TMEM231Q9H6L2 316 aa8.33□□□□□ -1.08
CLSTN3-209ENST00000539982 FKBP11Q9NYL4 201 aa8.33□□□□□ -1.08
CLSTN3-209ENST00000539982 ANKRD20A5PA0PJZ0 165 aa8.32□□□□□ -1.08
CLSTN3-209ENST00000539982 MEIS3P1A6NDR6 274 aa8.32□□□□□ -1.08
CLSTN3-209ENST00000539982 CENPXA8MT69 81 aa8.32□□□□□ -1.08
CLSTN3-209ENST00000539982 LYRM1O43325 122 aa8.32□□□□□ -1.08
CLSTN3-209ENST00000539982 PTTG1O95997 202 aa8.32□□□□□ -1.08
CLSTN3-209ENST00000539982 KRASP01116 189 aa8.32□□□□□ -1.08
CLSTN3-209ENST00000539982 IGHV3-48P01763 117 aa8.32□□□□□ -1.08
CLSTN3-209ENST00000539982 F2RP25116 425 aa8.32□□□□□ -1.08
CLSTN3-209ENST00000539982 GNRHRP30968 328 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms