RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 TRAV14DV4A0A0A6YYC5 116 aa12.42□□□□□ -0.42
DDB1-215ENST00000539712 IGHV3-74A0A0B4J1X5 117 aa12.42□□□□□ -0.42
DDB1-215ENST00000539712 A0A1B0GU03 582 aa12.42□□□□□ -0.42
DDB1-215ENST00000539712 APOHP02749 345 aaPredicted RBP12.42□□□□□ -0.42
DDB1-215ENST00000539712 SPCS3P61009 180 aa12.42□□□□□ -0.42
DDB1-215ENST00000539712 FAM219AQ8IW50 185 aa12.42□□□□□ -0.42
DDB1-215ENST00000539712 DUSP18Q8NEJ0 188 aa12.42□□□□□ -0.42
DDB1-215ENST00000539712 OR52E5Q8NH55 327 aa12.42□□□□□ -0.42
DDB1-215ENST00000539712 RBPMSQ93062 196 aaKnown RBP12.42□□□□□ -0.42
DDB1-215ENST00000539712 PRRT1Q99946 306 aa12.42□□□□□ -0.42
DDB1-215ENST00000539712 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.42□□□□□ -0.42
DDB1-215ENST00000539712 RSL24D1Q9UHA3 163 aaKnown RBP12.42□□□□□ -0.42
DDB1-215ENST00000539712 ALMS1Q8TCU4 4167 aa12.42□□□□□ -0.42
DDB1-215ENST00000539712 OR4C46A6NHA9 309 aa12.41□□□□□ -0.42
DDB1-215ENST00000539712 NPBWR1P48145 328 aa12.41□□□□□ -0.42
DDB1-215ENST00000539712 DHODHQ02127 395 aa12.41□□□□□ -0.42
DDB1-215ENST00000539712 TMEM170AQ8WVE7 144 aa12.41□□□□□ -0.42
DDB1-215ENST00000539712 VSIRQ9H7M9 311 aa12.41□□□□□ -0.42
DDB1-215ENST00000539712 PRR13Q9NZ81 148 aa12.41□□□□□ -0.42
DDB1-215ENST00000539712 FABP12A6NFH5 140 aa12.4□□□□□ -0.42
DDB1-215ENST00000539712 HOXA1P49639 335 aaPredicted RBP12.4□□□□□ -0.42
DDB1-215ENST00000539712 SUB1P53999 127 aaKnown RBP eCLIP12.4□□□□□ -0.42
DDB1-215ENST00000539712 SUPT4H1P63272 117 aaKnown RBP12.4□□□□□ -0.42
DDB1-215ENST00000539712 TMEM187Q14656 261 aa12.4□□□□□ -0.42
DDB1-215ENST00000539712 TMEM268Q5VZI3 342 aa12.4□□□□□ -0.42
DDB1-215ENST00000539712 ZNF600Q6ZNG1 722 aa12.4□□□□□ -0.42
DDB1-215ENST00000539712 OR4X1Q8NH49 305 aa12.4□□□□□ -0.42
DDB1-215ENST00000539712 MCFD2Q8NI22 146 aa12.4□□□□□ -0.42
DDB1-215ENST00000539712 ST8SIA2Q92186 375 aa12.4□□□□□ -0.42
DDB1-215ENST00000539712 GALNT14Q96FL9 552 aa12.4□□□□□ -0.42
DDB1-215ENST00000539712 PDCD10Q9BUL8 212 aa12.4□□□□□ -0.42
DDB1-215ENST00000539712 CACNG5Q9UF02 275 aa12.4□□□□□ -0.42
DDB1-215ENST00000539712 PUS1Q9Y606 427 aaKnown RBP eCLIP12.4□□□□□ -0.42
DDB1-215ENST00000539712 CORTO00230 105 aa12.39□□□□□ -0.43
DDB1-215ENST00000539712 CLN5O75503 358 aa12.39□□□□□ -0.43
DDB1-215ENST00000539712 IGKV1-17P01599 117 aa12.39□□□□□ -0.43
DDB1-215ENST00000539712 ZNF124Q15973 351 aa12.39□□□□□ -0.43
DDB1-215ENST00000539712 Q6ZWC4 215 aa12.39□□□□□ -0.43
DDB1-215ENST00000539712 APRG1Q8IVJ8 170 aa12.39□□□□□ -0.43
DDB1-215ENST00000539712 RNASE11Q8TAA1 199 aaKnown RBP12.39□□□□□ -0.43
DDB1-215ENST00000539712 EPPK1P58107 5090 aaKnown RBP12.39□□□□□ -0.43
DDB1-215ENST00000539712 KLF9Q13886 244 aaPredicted RBP12.38□□□□□ -0.43
DDB1-215ENST00000539712 NMSQ5H8A3 153 aa12.38□□□□□ -0.43
DDB1-215ENST00000539712 WFDC3Q8IUB2 231 aa12.38□□□□□ -0.43
DDB1-215ENST00000539712 IL22RA2Q969J5 263 aa12.38□□□□□ -0.43
DDB1-215ENST00000539712 TRIM63Q969Q1 353 aa12.38□□□□□ -0.43
DDB1-215ENST00000539712 ENY2Q9NPA8 101 aa12.38□□□□□ -0.43
DDB1-215ENST00000539712 V9GYH0 126 aa12.38□□□□□ -0.43
DDB1-215ENST00000539712 IGKV3-7A0A075B6H7 116 aa12.37□□□□□ -0.43
DDB1-215ENST00000539712 IGHV3-66A0A0C4DH42 116 aa12.37□□□□□ -0.43
DDB1-215ENST00000539712 KIR2DL5BA0A0G2JN68 375 aa12.37□□□□□ -0.43
DDB1-215ENST00000539712 KIR2DL5BA0A0G2JPC4 375 aa12.37□□□□□ -0.43
DDB1-215ENST00000539712 OPRK1P41145 380 aa12.37□□□□□ -0.43
DDB1-215ENST00000539712 HTR2BP41595 481 aa12.37□□□□□ -0.43
DDB1-215ENST00000539712 TFPI2P48307 235 aa12.37□□□□□ -0.43
DDB1-215ENST00000539712 APOC4P55056 127 aa12.37□□□□□ -0.43
DDB1-215ENST00000539712 EWSR1Q01844 656 aaKnown RBP eCLIP12.37□□□□□ -0.43
DDB1-215ENST00000539712 C2orf83Q53S99 150 aa12.37□□□□□ -0.43
DDB1-215ENST00000539712 TCF24Q7RTU0 167 aa12.37□□□□□ -0.43
DDB1-215ENST00000539712 KIR2DL5AQ8N109 375 aa12.37□□□□□ -0.43
DDB1-215ENST00000539712 GBGT1Q8N5D6 347 aa12.37□□□□□ -0.43
DDB1-215ENST00000539712 KIR2DL5BQ8NHK3 375 aa12.37□□□□□ -0.43
DDB1-215ENST00000539712 GINS3Q9BRX5 216 aa12.37□□□□□ -0.43
DDB1-215ENST00000539712 RBM38Q9H0Z9 239 aaKnown RBP12.37□□□□□ -0.43
DDB1-215ENST00000539712 MAP6D1Q9H9H5 199 aa12.37□□□□□ -0.43
DDB1-215ENST00000539712 SCP2D1Q9UJQ7 156 aa12.37□□□□□ -0.43
DDB1-215ENST00000539712 TP53TG1Q9Y2A0 90 aa12.37□□□□□ -0.43
DDB1-215ENST00000539712 UBE2CO00762 179 aa12.36□□□□□ -0.43
DDB1-215ENST00000539712 SPRY2O43597 315 aa12.36□□□□□ -0.43
DDB1-215ENST00000539712 NOL3O60936 208 aaKnown RBP12.36□□□□□ -0.43
DDB1-215ENST00000539712 DFFBO76075 338 aa12.36□□□□□ -0.43
DDB1-215ENST00000539712 RPL35AP18077 110 aaKnown RBP12.36□□□□□ -0.43
DDB1-215ENST00000539712 ZNF79Q15937 498 aa12.36□□□□□ -0.43
DDB1-215ENST00000539712 DEFB135Q30KP9 77 aa12.36□□□□□ -0.43
DDB1-215ENST00000539712 PRSS54Q6PEW0 395 aa12.36□□□□□ -0.43
DDB1-215ENST00000539712 LYZL2Q7Z4W2 148 aa12.36□□□□□ -0.43
DDB1-215ENST00000539712 IL17DQ8TAD2 202 aa12.36□□□□□ -0.43
DDB1-215ENST00000539712 MS4A6AQ9H2W1 248 aa12.36□□□□□ -0.43
DDB1-215ENST00000539712 HEYLQ9NQ87 328 aaPredicted RBP12.36□□□□□ -0.43
DDB1-215ENST00000539712 MCUBQ9NWR8 336 aa12.36□□□□□ -0.43
DDB1-215ENST00000539712 AKR1C4P17516 323 aa12.35□□□□□ -0.43
DDB1-215ENST00000539712 CRYBB3P26998 211 aa12.35□□□□□ -0.43
DDB1-215ENST00000539712 TIGITQ495A1 244 aa12.35□□□□□ -0.43
DDB1-215ENST00000539712 FAM24BQ8N5W8 94 aa12.35□□□□□ -0.43
DDB1-215ENST00000539712 RNF183Q96D59 192 aa12.35□□□□□ -0.43
DDB1-215ENST00000539712 SCGB3A2Q96PL1 93 aa12.35□□□□□ -0.43
DDB1-215ENST00000539712 KCNIP3Q9Y2W7 256 aa12.35□□□□□ -0.43
DDB1-215ENST00000539712 A0A0B4J2A0 478 aa12.34□□□□□ -0.43
DDB1-215ENST00000539712 NXPH3O95157 252 aa12.34□□□□□ -0.43
DDB1-215ENST00000539712 IGLC1P0CG04 106 aa12.34□□□□□ -0.43
DDB1-215ENST00000539712 SULT1A3P0DMM9 295 aa12.34□□□□□ -0.43
DDB1-215ENST00000539712 SULT1A4P0DMN0 295 aa12.34□□□□□ -0.43
DDB1-215ENST00000539712 STPG3Q8N7X2 389 aa12.34□□□□□ -0.43
DDB1-215ENST00000539712 SLC24A4Q8NFF2 622 aa12.34□□□□□ -0.43
DDB1-215ENST00000539712 RNASEH2CQ8TDP1 164 aaKnown RBP12.34□□□□□ -0.43
DDB1-215ENST00000539712 HSPB7Q9UBY9 170 aa12.34□□□□□ -0.43
DDB1-215ENST00000539712 SHPKQ9UHJ6 478 aa12.34□□□□□ -0.43
DDB1-215ENST00000539712 U3KQE9 123 aa12.34□□□□□ -0.43
DDB1-215ENST00000539712 A0A0J9YWU9 116 aa12.33□□□□□ -0.44
DDB1-215ENST00000539712 CEBPZOSA8MTT3 80 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms