RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 TMEM213A2RRL7 107 aa11.95□□□□□ -0.5
RPAIN-206ENST00000539417 IZUMO1RA6ND01 250 aa11.95□□□□□ -0.5
RPAIN-206ENST00000539417 C2orf70A6NJV1 201 aa11.95□□□□□ -0.5
RPAIN-206ENST00000539417 LGALS9O00182 355 aa11.95□□□□□ -0.5
RPAIN-206ENST00000539417 IGLV1-51P01701 117 aa11.95□□□□□ -0.5
RPAIN-206ENST00000539417 NPY1RP25929 384 aa11.95□□□□□ -0.5
RPAIN-206ENST00000539417 INSL3P51460 131 aa11.95□□□□□ -0.5
RPAIN-206ENST00000539417 SUB1P53999 127 aaKnown RBP eCLIP11.95□□□□□ -0.5
RPAIN-206ENST00000539417 DUSP18Q8NEJ0 188 aa11.95□□□□□ -0.5
RPAIN-206ENST00000539417 OR4D5Q8NGN0 318 aa11.95□□□□□ -0.5
RPAIN-206ENST00000539417 PTTG1O95997 202 aa11.94□□□□□ -0.5
RPAIN-206ENST00000539417 FOLR2P14207 255 aa11.94□□□□□ -0.5
RPAIN-206ENST00000539417 FCGR2BP31994 310 aaPredicted RBP11.94□□□□□ -0.5
RPAIN-206ENST00000539417 OPRK1P41145 380 aa11.94□□□□□ -0.5
RPAIN-206ENST00000539417 TATDN3Q17R31 274 aa11.94□□□□□ -0.5
RPAIN-206ENST00000539417 UXS1Q8NBZ7 420 aa11.94□□□□□ -0.5
RPAIN-206ENST00000539417 HIPK2Q9H2X6 1198 aa11.94□□□□□ -0.5
RPAIN-206ENST00000539417 C15orf62A8K5M9 175 aa11.93□□□□□ -0.5
RPAIN-206ENST00000539417 ZNF207O43670 478 aaKnown RBP11.93□□□□□ -0.5
RPAIN-206ENST00000539417 IFNA10P01566 189 aa11.93□□□□□ -0.5
RPAIN-206ENST00000539417 POLR2GP62487 172 aaKnown RBP eCLIP11.93□□□□□ -0.5
RPAIN-206ENST00000539417 ID3Q02535 119 aa11.93□□□□□ -0.5
RPAIN-206ENST00000539417 FAM106AQ4KMX7 169 aa11.93□□□□□ -0.5
RPAIN-206ENST00000539417 MRAPQ8TCY5 172 aa11.93□□□□□ -0.5
RPAIN-206ENST00000539417 PEMTQ9UBM1 199 aa11.93□□□□□ -0.5
RPAIN-206ENST00000539417 PIGBOS1A0A0B4J2F0 54 aa11.92□□□□□ -0.5
RPAIN-206ENST00000539417 A8MWP6 167 aa11.92□□□□□ -0.5
RPAIN-206ENST00000539417 FAM90A26D6RGX4 464 aa11.92□□□□□ -0.5
RPAIN-206ENST00000539417 WRBO00258 174 aa11.92□□□□□ -0.5
RPAIN-206ENST00000539417 SYNGR2O43760 224 aa11.92□□□□□ -0.5
RPAIN-206ENST00000539417 TMEM50AO95807 157 aa11.92□□□□□ -0.5
RPAIN-206ENST00000539417 IFNA21P01568 189 aa11.92□□□□□ -0.5
RPAIN-206ENST00000539417 BCAP31P51572 246 aa11.92□□□□□ -0.5
RPAIN-206ENST00000539417 IAH1Q2TAA2 248 aaPredicted RBP11.92□□□□□ -0.5
RPAIN-206ENST00000539417 SPSB3Q6PJ21 355 aa11.92□□□□□ -0.5
RPAIN-206ENST00000539417 C12orf45Q8N5I9 185 aaPredicted RBP11.92□□□□□ -0.5
RPAIN-206ENST00000539417 ZBTB8BQ8NAP8 495 aaPredicted RBP11.92□□□□□ -0.5
RPAIN-206ENST00000539417 TMEM190Q8WZ59 177 aa11.92□□□□□ -0.5
RPAIN-206ENST00000539417 ATP6V0BQ99437 205 aa11.92□□□□□ -0.5
RPAIN-206ENST00000539417 TXN2Q99757 166 aa11.92□□□□□ -0.5
RPAIN-206ENST00000539417 SIGLEC8Q9NYZ4 499 aa11.92□□□□□ -0.5
RPAIN-206ENST00000539417 ZNF256Q9Y2P7 627 aaPredicted RBP11.92□□□□□ -0.5
RPAIN-206ENST00000539417 H3BP45 60 aa11.91□□□□□ -0.5
RPAIN-206ENST00000539417 CORTO00230 105 aa11.91□□□□□ -0.5
RPAIN-206ENST00000539417 GNG7O60262 68 aa11.91□□□□□ -0.5
RPAIN-206ENST00000539417 LY86O95711 162 aa11.91□□□□□ -0.5
RPAIN-206ENST00000539417 IL5P05113 134 aa11.91□□□□□ -0.5
RPAIN-206ENST00000539417 CBLN1P23435 193 aa11.91□□□□□ -0.5
RPAIN-206ENST00000539417 PRSS54Q6PEW0 395 aa11.91□□□□□ -0.5
RPAIN-206ENST00000539417 CACFD1Q9UGQ2 172 aa11.91□□□□□ -0.5
RPAIN-206ENST00000539417 MLXQ9UH92 298 aa11.91□□□□□ -0.5
RPAIN-206ENST00000539417 U3KQ87 197 aa11.91□□□□□ -0.5
RPAIN-206ENST00000539417 INMT-MINDY4F8WBC2 141 aa11.9□□□□□ -0.5
RPAIN-206ENST00000539417 NDUFA4O00483 81 aa11.9□□□□□ -0.5
RPAIN-206ENST00000539417 NUPL2O15504 423 aaKnown RBP11.9□□□□□ -0.5
RPAIN-206ENST00000539417 TGP01266 2768 aa11.9□□□□□ -0.5
RPAIN-206ENST00000539417 GP9P14770 177 aa11.9□□□□□ -0.5
RPAIN-206ENST00000539417 PAX9P55771 341 aa11.9□□□□□ -0.5
RPAIN-206ENST00000539417 DEFB114Q30KQ6 69 aa11.9□□□□□ -0.5
RPAIN-206ENST00000539417 CD300EQ496F6 205 aaPredicted RBP11.9□□□□□ -0.5
RPAIN-206ENST00000539417 OR4X1Q8NH49 305 aa11.9□□□□□ -0.5
RPAIN-206ENST00000539417 RNASEH2CQ8TDP1 164 aaKnown RBP11.9□□□□□ -0.5
RPAIN-206ENST00000539417 MARVELD1Q9BSK0 173 aa11.9□□□□□ -0.5
RPAIN-206ENST00000539417 C20orf24Q9BUV8 137 aa11.9□□□□□ -0.5
RPAIN-206ENST00000539417 GSKIPQ9P0R6 139 aa11.9□□□□□ -0.5
RPAIN-206ENST00000539417 CLN5O75503 358 aa11.89□□□□□ -0.51
RPAIN-206ENST00000539417 SCGB1D2O95969 90 aa11.89□□□□□ -0.51
RPAIN-206ENST00000539417 IGKV1-17P01599 117 aa11.89□□□□□ -0.51
RPAIN-206ENST00000539417 NKX2-1P43699 371 aaPredicted RBP11.89□□□□□ -0.51
RPAIN-206ENST00000539417 NPBWR1P48145 328 aa11.89□□□□□ -0.51
RPAIN-206ENST00000539417 RND2P52198 227 aa11.89□□□□□ -0.51
RPAIN-206ENST00000539417 TIGITQ495A1 244 aa11.89□□□□□ -0.51
RPAIN-206ENST00000539417 IGHV3-49A0A0A0MS15 119 aa11.89□□□□□ -0.51
RPAIN-206ENST00000539417 FAM25EA8MYX2 175 aa11.89□□□□□ -0.51
RPAIN-206ENST00000539417 SSSCA1O60232 199 aa11.89□□□□□ -0.51
RPAIN-206ENST00000539417 MED6O75586 246 aa11.89□□□□□ -0.51
RPAIN-206ENST00000539417 CCNKO75909 580 aa11.89□□□□□ -0.51
RPAIN-206ENST00000539417 MBPP02686 304 aaPredicted RBP11.89□□□□□ -0.51
RPAIN-206ENST00000539417 C8orf88P0DMB2 117 aa11.89□□□□□ -0.51
RPAIN-206ENST00000539417 CD69Q07108 199 aa11.89□□□□□ -0.51
RPAIN-206ENST00000539417 SPANXN5Q5MJ07 72 aa11.89□□□□□ -0.51
RPAIN-206ENST00000539417 BTNL8Q6UX41 500 aa11.89□□□□□ -0.51
RPAIN-206ENST00000539417 TOMM20LQ6UXN7 152 aa11.89□□□□□ -0.51
RPAIN-206ENST00000539417 SLC16A13Q7RTY0 426 aa11.89□□□□□ -0.51
RPAIN-206ENST00000539417 NPIPB3Q92617 1050 aa11.89□□□□□ -0.51
RPAIN-206ENST00000539417 ZFAND3Q9H8U3 227 aa11.89□□□□□ -0.51
RPAIN-206ENST00000539417 GAR1Q9NY12 217 aaKnown RBP11.89□□□□□ -0.51
RPAIN-206ENST00000539417 PAIP2BQ9ULR5 123 aaKnown RBP11.89□□□□□ -0.51
RPAIN-206ENST00000539417 RCL1Q9Y2P8 373 aaKnown RBP11.89□□□□□ -0.51
RPAIN-206ENST00000539417 LSM4Q9Y4Z0 139 aaKnown RBP11.89□□□□□ -0.51
RPAIN-206ENST00000539417 SORL1Q92673 2214 aa11.88□□□□□ -0.51
RPAIN-206ENST00000539417 ZNF785A8K8V0 405 aa11.88□□□□□ -0.51
RPAIN-206ENST00000539417 PRSS46E5RG02 174 aa11.88□□□□□ -0.51
RPAIN-206ENST00000539417 YIF1AO95070 293 aa11.88□□□□□ -0.51
RPAIN-206ENST00000539417 SIX6O95475 246 aa11.88□□□□□ -0.51
RPAIN-206ENST00000539417 IFNA4P05014 189 aa11.88□□□□□ -0.51
RPAIN-206ENST00000539417 IGLC1P0CG04 106 aa11.88□□□□□ -0.51
RPAIN-206ENST00000539417 DEFB121Q5J5C9 76 aa11.88□□□□□ -0.51
RPAIN-206ENST00000539417 WDR89Q96FK6 387 aaPredicted RBP11.88□□□□□ -0.51
RPAIN-206ENST00000539417 ACY3Q96HD9 319 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms