RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 HIST2H2BEQ16778 126 aa5.34□□□□□ -1.55
USP28-206ENST00000538224 COX19Q49B96 90 aa5.34□□□□□ -1.55
USP28-206ENST00000538224 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.34□□□□□ -1.55
USP28-206ENST00000538224 TPTE2P1Q5T6R2 138 aa5.34□□□□□ -1.55
USP28-206ENST00000538224 C10orf113Q5VZT2 155 aa5.34□□□□□ -1.55
USP28-206ENST00000538224 C1orf122Q6ZSJ8 110 aa5.34□□□□□ -1.55
USP28-206ENST00000538224 MIR17HGQ75NE6 70 aa5.34□□□□□ -1.55
USP28-206ENST00000538224 S100A7AQ86SG5 101 aa5.34□□□□□ -1.55
USP28-206ENST00000538224 PPP1R27Q86WC6 154 aa5.34□□□□□ -1.55
USP28-206ENST00000538224 HIST1H2BHQ93079 126 aa5.34□□□□□ -1.55
USP28-206ENST00000538224 TRGV9Q99603 122 aa5.34□□□□□ -1.55
USP28-206ENST00000538224 HIST1H2BNQ99877 126 aa5.34□□□□□ -1.55
USP28-206ENST00000538224 HIST1H2BMQ99879 126 aa5.34□□□□□ -1.55
USP28-206ENST00000538224 SLC25A33Q9BSK2 321 aa5.34□□□□□ -1.55
USP28-206ENST00000538224 SSBP3Q9BWW4 388 aaPredicted RBP5.34□□□□□ -1.55
USP28-206ENST00000538224 PRORYQ9H606 182 aa5.34□□□□□ -1.55
USP28-206ENST00000538224 GAR1Q9NY12 217 aaKnown RBP5.34□□□□□ -1.55
USP28-206ENST00000538224 DPM3Q9P2X0 92 aa5.34□□□□□ -1.55
USP28-206ENST00000538224 PITPNC1Q9UKF7 332 aa5.34□□□□□ -1.55
USP28-206ENST00000538224 YTHDF2Q9Y5A9 579 aaKnown RBP5.34□□□□□ -1.55
USP28-206ENST00000538224 F11RQ9Y624 299 aaKnown RBP5.34□□□□□ -1.55
USP28-206ENST00000538224 DMXL2Q8TDJ6 3036 aa5.33□□□□□ -1.56
USP28-206ENST00000538224 BSNQ9UPA5 3926 aa5.33□□□□□ -1.56
USP28-206ENST00000538224 LOC105371242A0A075B767 164 aa5.33□□□□□ -1.56
USP28-206ENST00000538224 PSMB11A5LHX3 300 aa5.33□□□□□ -1.56
USP28-206ENST00000538224 TMEM8BA6NDV4 472 aa5.33□□□□□ -1.56
USP28-206ENST00000538224 CGB1A6NKQ9 187 aa5.33□□□□□ -1.56
USP28-206ENST00000538224 LYNX1G3V0Z9 82 aa5.33□□□□□ -1.56
USP28-206ENST00000538224 LY6LH3BQJ8 138 aa5.33□□□□□ -1.56
USP28-206ENST00000538224 SCGB2A1O75556 95 aa5.33□□□□□ -1.56
USP28-206ENST00000538224 CRYGCP07315 174 aa5.33□□□□□ -1.56
USP28-206ENST00000538224 OR10J4P0C629 311 aa5.33□□□□□ -1.56
USP28-206ENST00000538224 TRGC1P0CF51 173 aa5.33□□□□□ -1.56
USP28-206ENST00000538224 LYNX1P0DP58 116 aa5.33□□□□□ -1.56
USP28-206ENST00000538224 NPPCP23582 126 aa5.33□□□□□ -1.56
USP28-206ENST00000538224 PRTN3P24158 256 aa5.33□□□□□ -1.56
USP28-206ENST00000538224 GNG4P50150 75 aa5.33□□□□□ -1.56
USP28-206ENST00000538224 NDUFA6P56556 154 aa5.33□□□□□ -1.56
USP28-206ENST00000538224 DIAPH2-AS1Q14236 149 aa5.33□□□□□ -1.56
USP28-206ENST00000538224 PLGLAQ15195 96 aa5.33□□□□□ -1.56
USP28-206ENST00000538224 TIGITQ495A1 244 aa5.33□□□□□ -1.56
USP28-206ENST00000538224 C4orf17Q53FE4 359 aa5.33□□□□□ -1.56
USP28-206ENST00000538224 C10orf55Q5SWW7 151 aa5.33□□□□□ -1.56
USP28-206ENST00000538224 DNLZQ5SXM8 178 aa5.33□□□□□ -1.56
USP28-206ENST00000538224 MINOS1Q5TGZ0 78 aa5.33□□□□□ -1.56
USP28-206ENST00000538224 SPATA31B1PQ5VZV4 182 aa5.33□□□□□ -1.56
USP28-206ENST00000538224 UNQ6494/PRO21346Q6UXR6 183 aa5.33□□□□□ -1.56
USP28-206ENST00000538224 TMEM116Q8NCL8 245 aa5.33□□□□□ -1.56
USP28-206ENST00000538224 OR5AU1Q8NGC0 362 aa5.33□□□□□ -1.56
USP28-206ENST00000538224 OR10G8Q8NGN5 311 aa5.33□□□□□ -1.56
USP28-206ENST00000538224 SMIM12Q96EX1 92 aa5.33□□□□□ -1.56
USP28-206ENST00000538224 EAF1Q96JC9 268 aaPredicted RBP5.33□□□□□ -1.56
USP28-206ENST00000538224 PAXXQ9BUH6 204 aa5.33□□□□□ -1.56
USP28-206ENST00000538224 TNFRSF19Q9NS68 423 aa5.33□□□□□ -1.56
USP28-206ENST00000538224 MINOS1-NBL1R4GNA1 71 aa5.33□□□□□ -1.56
USP28-206ENST00000538224 TNCP24821 2201 aa5.33□□□□□ -1.56
USP28-206ENST00000538224 PKDREJQ9NTG1 2253 aa5.32□□□□□ -1.56
USP28-206ENST00000538224 MALRD1Q5VYJ5 2156 aa5.32□□□□□ -1.56
USP28-206ENST00000538224 TRBV9A0A0B4J1U6 114 aa5.32□□□□□ -1.56
USP28-206ENST00000538224 IGHV3-72A0A0B4J1Y9 119 aa5.32□□□□□ -1.56
USP28-206ENST00000538224 HELTA6NFD8 242 aa5.32□□□□□ -1.56
USP28-206ENST00000538224 ODF3BA8MYP8 253 aa5.32□□□□□ -1.56
USP28-206ENST00000538224 NBR2O15453 112 aa5.32□□□□□ -1.56
USP28-206ENST00000538224 MOSP00540 346 aa5.32□□□□□ -1.56
USP28-206ENST00000538224 PCP4P48539 62 aa5.32□□□□□ -1.56
USP28-206ENST00000538224 CNN1P51911 297 aaKnown RBP5.32□□□□□ -1.56
USP28-206ENST00000538224 TAS2R60P59551 318 aa5.32□□□□□ -1.56
USP28-206ENST00000538224 PLP1P60201 277 aa5.32□□□□□ -1.56
USP28-206ENST00000538224 CENPWQ5EE01 88 aa5.32□□□□□ -1.56
USP28-206ENST00000538224 ACTL10Q5JWF8 245 aa5.32□□□□□ -1.56
USP28-206ENST00000538224 LCE2DQ5TA82 110 aaPredicted RBP5.32□□□□□ -1.56
USP28-206ENST00000538224 TEX38Q6PEX7 206 aa5.32□□□□□ -1.56
USP28-206ENST00000538224 TMEM183AQ8IXX5 376 aa5.32□□□□□ -1.56
USP28-206ENST00000538224 NECAP1Q8NC96 275 aa5.32□□□□□ -1.56
USP28-206ENST00000538224 OR4X1Q8NH49 305 aa5.32□□□□□ -1.56
USP28-206ENST00000538224 OR2T6Q8NHC8 308 aa5.32□□□□□ -1.56
USP28-206ENST00000538224 SRSF12Q8WXF0 261 aaKnown RBP5.32□□□□□ -1.56
USP28-206ENST00000538224 TMEM37Q8WXS4 190 aa5.32□□□□□ -1.56
USP28-206ENST00000538224 NPIPB3Q92617 1050 aa5.32□□□□□ -1.56
USP28-206ENST00000538224 FRZBQ92765 325 aa5.32□□□□□ -1.56
USP28-206ENST00000538224 MISP3Q96FF7 219 aa5.32□□□□□ -1.56
USP28-206ENST00000538224 CHRDL1Q9BU40 450 aa5.32□□□□□ -1.56
USP28-206ENST00000538224 DERL1Q9BUN8 251 aa5.32□□□□□ -1.56
USP28-206ENST00000538224 SLC25A2Q9BXI2 301 aa5.32□□□□□ -1.56
USP28-206ENST00000538224 FNDC4Q9H6D8 234 aaPredicted RBP5.32□□□□□ -1.56
USP28-206ENST00000538224 TPSG1Q9NRR2 321 aa5.32□□□□□ -1.56
USP28-206ENST00000538224 ZNF355PQ9NSJ1 428 aa5.32□□□□□ -1.56
USP28-206ENST00000538224 IL36BQ9NZH7 164 aa5.32□□□□□ -1.56
USP28-206ENST00000538224 RNF24Q9Y225 148 aa5.32□□□□□ -1.56
USP28-206ENST00000538224 IGF2RP11717 2491 aa5.31□□□□□ -1.56
USP28-206ENST00000538224 TRBV20OR9-2A0A075B6H5 130 aa5.31□□□□□ -1.56
USP28-206ENST00000538224 IGKV1D-37A0A075B6S9 117 aa5.31□□□□□ -1.56
USP28-206ENST00000538224 A6NJY4 79 aa5.31□□□□□ -1.56
USP28-206ENST00000538224 A6NNC1 897 aa5.31□□□□□ -1.56
USP28-206ENST00000538224 TEX22C9J3V5 150 aa5.31□□□□□ -1.56
USP28-206ENST00000538224 C22orf46C9J442 243 aa5.31□□□□□ -1.56
USP28-206ENST00000538224 E7EUB6 86 aa5.31□□□□□ -1.56
USP28-206ENST00000538224 PHOX2AO14813 284 aa5.31□□□□□ -1.56
USP28-206ENST00000538224 TIMM23O14925 209 aa5.31□□□□□ -1.56
USP28-206ENST00000538224 HYPMO75409 117 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms